KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:29 2014 Check: 00 .. Name: ENSTTRP00000003892/1-469 Len: 573 Check: 5809 Weight: 1.00 Name: ENSP00000379322/1-468 Len: 573 Check: 6133 Weight: 1.00 Name: ENSBTAP00000010606/1-470 Len: 573 Check: 5782 Weight: 1.00 Name: bmy_04229T0/1-534 Len: 573 Check: 4591 Weight: 1.00 Name: BACU013478/1-534 Len: 573 Check: 7434 Weight: 1.00 // 1 50 ENSTTRP00000003892/1-469 ---------- ---------- ---------- --------MV DTESPIGPLS ENSP00000379322/1-468 ---------- ---------- ---------- --------MV DTESPLCPLS ENSBTAP00000010606/1-470 ---------- ---------- ---------- ------MEMV DTESPIGPLS bmy_04229T0/1-534 MMFLLKENQC SSMSTSPMTS LSSQERGARR WDQLYPVEMV DTESLIGPLS BACU013478/1-534 ---------- ---------- ---------- --------MV DTESPIGPLS 51 100 ENSTTRP00000003892/1-469 PLEADDLESP LSEEFLQEMG TIQDISQSIG EDSSGSFSFT EYQYLGSGPG ENSP00000379322/1-468 PLEAGDLESP LSEEFLQEMG NIQEISQSIG EDSSGSFGFT EYQYLGSCPG ENSBTAP00000010606/1-470 PLEADDLESP LSADFLQEMG TIQEISQSIG EDSSGSFSFT EYQYLGSGPG bmy_04229T0/1-534 PLEADDLESP LSEEFLQEMG TIQEISQSIG EDSSGSFSFT EYQYLGSGPG BACU013478/1-534 PLEADDLESP LSEEFLQEMG TIQEISQSIG EDSSGSFSFT EYQYLGSGPG 101 150 ENSTTRP00000003892/1-469 SDGSVITDTL SPASSPSSIS YPVVPGSAEE SSSVALNIEC RIXXXXXXXX ENSP00000379322/1-468 SDGSVITDTL SPASSPSSVT YPVVPGSVDE SPSGALNIEC RICGDKASGY ENSBTAP00000010606/1-470 SDGSVITDTL SPASSPSSVS YPAVPGSAEE SSSIALNIEC RICGDKASGY bmy_04229T0/1-534 SDGSVITDTL SPASSPSSIS YPVVPGSTEE SSSVALNIEC RICGDKASGY BACU013478/1-534 SDGSVITDTL SPASSPSSVS YPVVPGSTEE SSSVALNIEC RICGDKASGY 151 200 ENSTTRP00000003892/1-469 XXXXXXXXXX XGFFRRTIRL KLAYDTCDRS CKIQKKNRNK CQYCRFHKCL ENSP00000379322/1-468 HYGVHACEGC KGFFRRTIRL KLVYDKCDRS CKIQKKNRNK CQYCRFHKCL ENSBTAP00000010606/1-470 HYGVHACEGC KGFFRRTIRL KLVYDKCDRS CKIQKKNRNK CQYCRFHKCL bmy_04229T0/1-534 HYGVHACEGC KGFFRRTIRL KLAYDTCDRS CKIQKKNRNK CQYCRFHKCL BACU013478/1-534 HYGVHACEGC KGFFRRTIRL KLAYDTCDRS CKIQKKNRNK CQYCRFHKCL 201 250 ENSTTRP00000003892/1-469 SVGMSHNAIR FGRMPRSEKA KLKAEILTCE HDLEKNSETA DLKSLAKRIY ENSP00000379322/1-468 SVGMSHNAIR FGRMPRSEKA KLKAEILTCE HDIE-DSETA DLKSLAKRIY ENSBTAP00000010606/1-470 SVGMSHNAIR FGRMPRSEKA KLKAEILTCE HDLE-DSETA DLKSLAKRIY bmy_04229T0/1-534 SVGMSHNAIR FGRMPRSEKA KLKAEILTCE HDLE-NSETA DLKSLAKRIY BACU013478/1-534 SVGMSHNAIR FGRMPRSEKA KLKAEILTCE HDLE-NSETA DLKSLAKRIY 251 300 ENSTTRP00000003892/1-469 EAYLKNFNMN KVKARVILAG KASNNPPFVI HDMETLCMAE KTLVAKLVAN ENSP00000379322/1-468 EAYLKNFNMN KVKARVILSG KASNNPPFVI HDMETLCMAE KTLVAKLVAN ENSBTAP00000010606/1-470 EAYLKNFNMN KIKARVILAG KTNNNPPFVI HDMETLCMAE KTLVAKLVAN bmy_04229T0/1-534 EAYLKNFNMN KVKARVILAG KASNNPPFVI HDMETLCMAE KTLVAKLVAN BACU013478/1-534 EAYLKNFNMN KVKARVILAG KASNNPPFVI HDMETLCMAE KTLVAKLVAN 301 350 ENSTTRP00000003892/1-469 GIQNKEAEVR IFHCCQCTSV ETVTELTEFA KSIPGFANLD LNDQVTLLKY ENSP00000379322/1-468 GIQNKEAEVR IFHCCQCTSV ETVTELTEFA KAIPGFANLD LNDQVTLLKY ENSBTAP00000010606/1-470 GIQNKEAEVR IFHCCQCTSV ETVTELTEFA KSIPGFANLD LNDQVTLLKY bmy_04229T0/1-534 GIQNKEAEVR IFHCCQCTSV ETVTELTEFA KSIPGFANLD LNDQVTLLKY BACU013478/1-534 GIQNKEAEVR IFHCCQCTSV ETVTELTEFA KSIPGFANLD LNDQVTLLKY 351 400 ENSTTRP00000003892/1-469 GVYEAIFAML SSVMNKDGML VAYGNGFITR EFLKSLRKPF CDIMEPKFDF ENSP00000379322/1-468 GVYEAIFAML SSVMNKDGML VAYGNGFITR EFLKSLRKPF CDIMEPKFDF ENSBTAP00000010606/1-470 GVYEAIFAML SSVMNKDGML VAYGNGFITR EFLKSLRKPF CDIMEPKFDF bmy_04229T0/1-534 GVYEAIFAML SSVMNKDGML VAYGNGFITR EFLKSLRKPF CDIMEPKFDF BACU013478/1-534 GVYEAIFAML SSVMNKDGML VAYGNGFITR EFLKSLRKPF CDIMEPKFDF 401 450 ENSTTRP00000003892/1-469 AMKFNALELD DSDISLFVAA IICCG----- ---------- ---------- ENSP00000379322/1-468 AMKFNALELD DSDISLFVAA IICCG----- ---------- ---------- ENSBTAP00000010606/1-470 AMKFNALELD DSDISLFVAA IICCG----- ---------- ---------- bmy_04229T0/1-534 AMKFNALELD DSDISLFVAA IICCGGKLLI SPAGAVALTA SYLENLAVVN BACU013478/1-534 AMKFNALELD DSDISLFVAA IICCGGKLLI SPAGAVALTA SYLENLAVVN 451 500 ENSTTRP00000003892/1-469 ---------- ---------- ---------- ---------- -DRPGLLNVG ENSP00000379322/1-468 ---------- ---------- ---------- ---------- -DRPGLLNVG ENSBTAP00000010606/1-470 ---------- ---------- ---------- ---------- -DRPGLLNVG bmy_04229T0/1-534 PT-------- ---------- ---------- ---------- IDRPGLLNVG BACU013478/1-534 PTGDRRGHCL LKLPEGVLSP ASPSLAELRL ATVARTLDME LDRPGLLNVG 501 550 ENSTTRP00000003892/1-469 HIEKMQEGIV HVLKLHLQSN HPDDVFLFPK LLQKMADLRQ LVTEHAQLVQ ENSP00000379322/1-468 HIEKMQEGIV HVLRLHLQSN HPDDIFLFPK LLQKMADLRQ LVTEHAQLVQ ENSBTAP00000010606/1-470 HIEKMQEGIV HVLKLHLQNN HPDDVFLFPK LLQKMADLRQ LVTEHAQLVQ bmy_04229T0/1-534 HIEKMQEGIV HVLKLHLQSN HPDDVFLFPK LLQKMADLRQ LVTEHAQLVQ BACU013478/1-534 HIEKMQEGIV HVLKLHLQSN HPDDVFLFPK LLQKMADLRQ LVTEHAQLVQ 551 600 ENSTTRP00000003892/1-469 VIKKTESDAA LHPLLQEIYR DMY ENSP00000379322/1-468 IIKKTESDAA LHPLLQEIYR DMY ENSBTAP00000010606/1-470 VIKKTESDAA LHPLLQEIYR DMY bmy_04229T0/1-534 VIKKTESDAA LHPLLQEIYR DMY BACU013478/1-534 VIKKTESDAA LHPLLQEIYR DMY