KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:30 2014 Check: 00 .. Name: ENSP00000377401/1-432 Len: 433 Check: 6790 Weight: 1.00 Name: ENSBTAP00000010620/1-433 Len: 433 Check: 26 Weight: 1.00 Name: ENSTTRP00000006549/1-428 Len: 433 Check: 1895 Weight: 1.00 Name: bmy_00030T0/1-383 Len: 433 Check: 86 Weight: 1.00 Name: BACU015819/1-209 Len: 433 Check: 9914 Weight: 1.00 // 1 50 ENSP00000377401/1-432 MDARWWAVVV LAAFPSLGAG GE-TPEAPPE SWTQLWFFRF VVNAAGYASF ENSBTAP00000010620/1-433 MDPRWWAVVV LAALPSLGAG GEKNLEAPPE SWTQLWFFRF LVNAAGYASF ENSTTRP00000006549/1-428 ---RWWAVVL LAALPSLGAG GE-NPEGPLE SWTQLWFFRF LVNAAGYASF bmy_00030T0/1-383 ---------- ---------- ---------- ---------- ---------- BACU015819/1-209 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000377401/1-432 MVPGYLLVQY FRRKNYLETG RGLCFPLVKA CVFGNEPKAS DEVPLAPRTE ENSBTAP00000010620/1-433 MVPGYLLVQY FRRKNYLETG RGLCFPLVKT CVFGNEPKAP DEVPLAARAE ENSTTRP00000006549/1-428 MVPGYLLVQY FRRKNYLETG RGLCFPLVKT C-FGNEHKAP DEVLLAPRAE bmy_00030T0/1-383 MVPGYLLVQY FRRKNYLETG RGLCFPLVKT CVFGNEPKAP DEVPLAPRAE BACU015819/1-209 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000377401/1-432 AAETTPMWQA LKLLFCATGL QVSYLTWGVL QERVMTRSYG ATATSPGERF ENSBTAP00000010620/1-433 PAETSPTWQA LKLLFCASGL QVSYLTWGVL QERVMTRSYG ATATSPGERF ENSTTRP00000006549/1-428 PAETSPTRQA KKLLFCAAGL QVSYLTWGVL QERVMTRSYG ATATLPGERF bmy_00030T0/1-383 PAETSPTWQA LKLLFCAAGL QVSYLTWGVL QERVMTRSYG ATATLPGERF BACU015819/1-209 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000377401/1-432 TDSQFLVLMN RVLALIVAGL SCVLCKQPRH GAPMYRYSFA SLSNVLSSWC ENSBTAP00000010620/1-433 SDSQFLVLMN RILALMVAGV YCILCKQPRH GAPMYRYSFA SLSNVLSSWC ENSTTRP00000006549/1-428 SDSQFLVLMN RVLALMVSGL YCILCKQPRH GAPMYRYSFA SLSNVLSSWC bmy_00030T0/1-383 SDSQFLVLMN RVLALMVAGF YCILCKQPRH GAPMYRYSFA SLSNVLSSWC BACU015819/1-209 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000377401/1-432 QYEALKFVSF PTQVLAKASK VIPVMLMGKL VSRRSYEHWE YLTATLISIG ENSBTAP00000010620/1-433 QYEALKFVSF PTQVLAKASK VIPVMLMGKL VSRRSYEHWE YLTAGLISIG ENSTTRP00000006549/1-428 QYEALKFVSF PTQVLAKASK VIPVMLMGKL VSRRSYEHWE YLTAGLISIG bmy_00030T0/1-383 QYEALKFVSF PTQVLAKASK VIPVMLMGKL VSRRSYEHWE YLTAGLISIG BACU015819/1-209 ---------- ---------- ----MLMGKL VSRRSYEHWE YLTAGLISIG 251 300 ENSP00000377401/1-432 VSMFLLSSGP EPRSSPATTL SGLILLAGYI AFDSFTSNWQ DALFAYKMSS ENSBTAP00000010620/1-433 VSMFLLSSGP EPHSSPATTL SGLILLAGYI AFDSFTSNWQ DALFAYKMSS ENSTTRP00000006549/1-428 VSMFLLSSGP EPHSSPATTL SGLILLAGYI AFDSFTSNWQ DALFAYKMSS bmy_00030T0/1-383 VSMFLLSSGP EPHSSPATTL SGLILLAGYI AFDSFTSNWQ DALFAYKMSS BACU015819/1-209 VSMFLLSSGP EPHSSPATTL SGLILLAGYI AFDSFTSNWQ DALFAYKMSS 301 350 ENSP00000377401/1-432 VQMMFGVNFF SCLFTVGSLL EQGALLEGTR FMGRHSEFAA HALLLSICSA ENSBTAP00000010620/1-433 VQMMFGVNLF SCLFTVGSLL EQGALLEGIR FMGRHSEFAA HTLLLSICSA ENSTTRP00000006549/1-428 VQMMFGVNFF SCLFTVGSLL EQGALLEGVR FMGRHSEFAA HTLLLSICSA bmy_00030T0/1-383 VQMMFGVNFF SCLFTVGSLL EQGALLEGIR FMGRHSEFAA HTLLLSICSA BACU015819/1-209 VQMMFGVNFF SCLFTVGSLL EQGALLEGIR FMGRHSEFAA HTLLLSICSA 351 400 ENSP00000377401/1-432 CGQLFIFYTI GQFGAAVFTI IMTLRQAFAI LLSCLLYGHT VTVVGGLGVA ENSBTAP00000010620/1-433 CGQLFIFYTI GQFGAAVFTI IMTLRQAFAI LLSCLLYGHT VTVVGGLGVA ENSTTRP00000006549/1-428 CGQLFIFYTI GQFGAAVFTI IMTLRQAFAI LLSCLLYGHT VTVVGGLGVA bmy_00030T0/1-383 CGQLFIFYTI GQFGAAVFTI IMTLRQAFAI LLSCLLYGHT VTVVGGLGVA BACU015819/1-209 CGQLFIFYTI GQFGAAIFTI IMTLRQAFAI LLSCLLYGHT VTVVGGLGVA 401 450 ENSP00000377401/1-432 VVFAALLLRV YARGRLKQRG KKAVPVESPV QKV ENSBTAP00000010620/1-433 VVFAALLLRV YARGRLKQRG KKAMPVESSV QKV ENSTTRP00000006549/1-428 VVFAALLLRV YARGRLKQRG KKVVPVESSV QKV bmy_00030T0/1-383 VVFAALLLRV YARGRLKQRG KKVVPVESSV QKV BACU015819/1-209 VVFAALLLRV YARGRLKQRG KKVVPVESSV QKV