KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:37 2014 Check: 00 .. Name: ENSP00000338276/1-249 Len: 262 Check: 8039 Weight: 1.00 Name: ENSBTAP00000010633/1-247 Len: 262 Check: 4586 Weight: 1.00 Name: ENSTTRP00000003298/1-247 Len: 262 Check: 5256 Weight: 1.00 Name: bmy_13135T0/1-258 Len: 262 Check: 2259 Weight: 1.00 Name: BACU018768/1-227 Len: 262 Check: 2585 Weight: 1.00 // 1 50 ENSP00000338276/1-249 ---------- --MEIKHLLF LVAAACLLPM LSMKKKSARD QFNKLVTDLP ENSBTAP00000010633/1-247 ---------- --MTMKCFLF LAIAAGCLPV LIIKTKPAKV PYDTLLTELE ENSTTRP00000003298/1-247 ---------- --MTMKYFLL LAAAAVFLHV LITRAKPPKV PYDTLLMEPA bmy_13135T0/1-258 METNILRCCR LKNAVDHYSF NINYKFMSQS L--QAKPPKV PYDTLLTELA BACU018768/1-227 ---------- ---------- ---------- ---QAKPPKV PYDTLLTELA 51 100 ENSP00000338276/1-249 NVQEEIVNIH NALRRRVVPP ASNMLKMSWS EEAAQNARIF SKYCDMTESN ENSBTAP00000010633/1-247 AVQEEIVTAH NILRRGVSPP ASNMLKMNWS EEAAQNARML SKDCELVQSN ENSTTRP00000003298/1-247 TVQEEIVTVH NTLRRGVFPP ASNMLKMXXX XXXXXXXXXX XXXXXXXXXX bmy_13135T0/1-258 TVQEEIVAVH NTLRRGVFPP ASNMLKMNWS EEAARNARMX SKDCELVESN BACU018768/1-227 TVQEEIVAVH NTLRRGVFPP ASNMLKMVRL TATTTMPIIV TVFTEILLSS 101 150 ENSP00000338276/1-249 PLERRLPNTF CGENMHMTSY PVSWSSVIGV WYSESTSFKH GEWTTTDDDI ENSBTAP00000010633/1-247 ALKRRITNTF CGENMHLTSY PISWSNVIRI WYSESKYFQY GEWTLTDDDV ENSTTRP00000003298/1-247 XXXXXXXXTL CGENMHLTSY PISWSNVIRI WYSESKYFKY GEWTSTDDDM bmy_13135T0/1-258 ALKRRITNTF CGENMHLTSY PISWSNVIRI WYSESKYFKY GEWTSTDDDM BACU018768/1-227 ICFPYTKNTF CGENMHLTSY PISWSNVIRI WYSESKYFKY GEWTPTDDDM 151 200 ENSP00000338276/1-249 TTDHYTQIVW ATSYLIGCAI ASCRQQGSPR YLYVCHYCHE GNDPETKNEP ENSBTAP00000010633/1-247 TTDHYTQVVW ATSYLIGCGM SSCHK--GIH YLYICHYCHE GNDPDKKNVP ENSTTRP00000003298/1-247 MIEHYTQVVW ATSYLIGCGI SSCRK--GIQ YLYICHYCHE GNDPDKKNVP bmy_13135T0/1-258 MIEHYTQVVW ATSYLIGCGI SSCXK--GIQ YLYVCHYCHE GNDPDKKNVP BACU018768/1-227 MIEHYTQVVW ATSYLIGCGI SSCRK--GIQ YLYVCHYCHE GNDPDKKNVP 201 250 ENSP00000338276/1-249 YKTGVPCEAC PSNCEDKLCT NPCIYYDEYF DCDIQVH-YL GCNHSTTILF ENSBTAP00000010633/1-247 YNKGSPCGDC PNNCEDKLCT NPCIYYDEYN NCNTQTQ-RL GCNHLSVQRL ENSTTRP00000003298/1-247 HNEGTPCGDC PNNCEDKLCT NPCIYYDEYS NCKTQTR-GP ACSHLSVQRL bmy_13135T0/1-258 YNKGTPCGDC PNNCEDKLCT NPCVYYDEYS NCKTQTRGGP ACSHLSVQRL BACU018768/1-227 YNNGTPCGDC PNNCEDKLCT NPCVYYDEYS NCETQTRGGP ACSHLSVQRL 251 300 ENSP00000338276/1-249 CKATCLCDTE IK ENSBTAP00000010633/1-247 CKASCMCQTE IK ENSTTRP00000003298/1-247 CKASCLYPTE IK bmy_13135T0/1-258 CKASCLCPTE IK BACU018768/1-227 CKASCLCPTE IK