KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:38 2014 Check: 00 .. Name: ENSBTAP00000010644/1-472 Len: 497 Check: 2833 Weight: 1.00 Name: ENSTTRP00000006644/1-472 Len: 497 Check: 3518 Weight: 1.00 Name: ENSP00000357861/1-472 Len: 497 Check: 2002 Weight: 1.00 Name: bmy_11115T0/1-485 Len: 497 Check: 2528 Weight: 1.00 Name: BACU007251/1-442 Len: 497 Check: 2281 Weight: 1.00 // 1 50 ENSBTAP00000010644/1-472 ---------- ---------- -----MATKC GKCGPGYPSP LEAMKGPREE ENSTTRP00000006644/1-472 ---------- ---------- -----MATKC GKCGPGYPSP LEAMKGPREE ENSP00000357861/1-472 ---------- ---------- -----MATKC GNCGPGYSTP LEAMKGPREE bmy_11115T0/1-485 MGLEKVEPGH TTLPWLLSGQ LWQEDMATKC GKCGPGYPSP LEAMKGPREE BACU007251/1-442 ---------- ---------- ---------- ---------- ---MKGPREE 51 100 ENSBTAP00000010644/1-472 LVYLPCIYRN TGTEAPDYLA TVDVNPKSPQ YSQVIHRLPM PNLKDELHHS ENSTTRP00000006644/1-472 IVYLPCIYRN TNTEAPDYLA TVDVDPKSPQ YCQVIHRLPM PHLKDELHHS ENSP00000357861/1-472 IVYLPCIYRN TGTEAPDYLA TVDVDPKSPQ YCQVIHRLPM PNLKDELHHS bmy_11115T0/1-485 IVYLPCIYRN TNTEAPDYLA TVDVDPKSPQ YCQVIHRLPM PHLKDELHHS BACU007251/1-442 IVYLPCIYRN TNIEAPDYLA TVDVDPKSPQ YCQVIHRLPM PHLKDELHHS 101 150 ENSBTAP00000010644/1-472 GWNTCSSCFG DSTKSRTKLL LPSLISSRVY VVDVATEPRA PKLHKVVEPE ENSTTRP00000006644/1-472 GWNTCSSCFG DSTKSRTKLL LPSLISSRIY VVDVGTEPRA PRLHKVVEPK ENSP00000357861/1-472 GWNTCSSCFG DSTKSRTKLV LPSLISSRIY VVDVGSEPRA PKLHKVIEPK bmy_11115T0/1-485 GWNTCSSCFG DSTKSRTKLL LPSLISSRIY VVD------- -----VVEPK BACU007251/1-442 GWNTCSSCFG DSTKSRTKLL LPSLISSRIY VVD------- -----VVEPK 151 200 ENSBTAP00000010644/1-472 EIHAKCDLSY LHTSHCLASG EVMISALGDP RGNGKGGFVL LDGETFEVKG ENSTTRP00000006644/1-472 DIHAKCDLGY LHTTHCLASG DVMISSLGDP KGNGKGGFVL LDGETFEVKG ENSP00000357861/1-472 DIHAKCELAF LHTSHCLASG EVMISSLGDV KGNGKGGFVL LDGETFEVKG bmy_11115T0/1-485 DIHAKCDLGY LHTTHCLASG EVMISSLGDP KGNGKGGFVL LDGETFEVKG BACU007251/1-442 DIHAKCDLGY LHTTHCLASG EVMISSLGDP KGNGKGGFVL LDGETFEVKG 201 250 ENSBTAP00000010644/1-472 TWEQPGGAAP MGYDFWYQPR HNVMISTEWA APNVLRDGFN PADVEAGLYG ENSTTRP00000006644/1-472 TWERPGGAAP MGYDFWYQPR HNVMVSTEWA APNVLRDGFN PADVEAGLYG ENSP00000357861/1-472 TWERPGGAAP LGYDFWYQPR HNVMISTEWA APNVLRDGFN PADVEAGLYG bmy_11115T0/1-485 TWERPGGAAP MGYDFWYQPR HNVMVSTEWA APNVLQDGFN PADVEAGLYG BACU007251/1-442 TWERPGGAAP MGYDFWYQPR HNVMVSTEWA APNVLQDGFN PADVEAGLYG 251 300 ENSBTAP00000010644/1-472 QHLYVWDWQR HERVQTLTLQ DGLIPLEIRF LHNPAADQGF VGCALGSNIQ ENSTTRP00000006644/1-472 NHLHVWDWQR HEMVQTLTLQ DGLIPLEVRF LHNPAADQGF VGCALSSNIQ ENSP00000357861/1-472 SHLYVWDWQR HEIVQTLSLK DGLIPLEIRF LHNPDAAQGF VGCALSSTIQ bmy_11115T0/1-485 NHLHVWDWQR HERVQTLTLQ DGLIPLEIRF LHNPAADQGF VGCALSSNIQ BACU007251/1-442 NHLHVWDWQR HERVQTLTLQ DGLIPLEIRF LHNPAADQGF VGCALSSNIQ 301 350 ENSBTAP00000010644/1-472 RFYKNQGGTW SVEKVIQVPP KKVKGWILPE MPSLITDILL SLDDRFLYFS ENSTTRP00000006644/1-472 RFYKNEGGTW SVEKVIQVPP KKVKGWMLPE MPGLITDILL SLDDRFLYFS ENSP00000357861/1-472 RFYKNEGGTW SVEKVIQVPP KKVKGWLLPE MPGLITDILL SLDDRFLYFS bmy_11115T0/1-485 RFYKNEGGTW SVEKVIQVPP KKVKGWMLPE MPGLITDILL SLDDRFLYFS BACU007251/1-442 RFYKNEGGTW SVEKVIQVPP KKVKGWMLPE MPGLITDILL SLDDRFLYFS 351 400 ENSBTAP00000010644/1-472 NWLHGDLRQY DISDPKRPRL VGQIFLGGSI VKGGPVQVLE DQELKCQPEP ENSTTRP00000006644/1-472 NWLHGDLRQY DISDPQRPRL TGQLFLGGSI VKGGPVQVLE DQELKSQPEP ENSP00000357861/1-472 NWLHGDLRQY DISDPQRPRL TGQLFLGGSI VKGGPVQVLE DEELKSQPEP bmy_11115T0/1-485 NWLHGDLRQY DISDPQRPRL TGQLFLGGSI VKGGPVQVLE DQELNSQPEP BACU007251/1-442 NWLHGDLRQY DISDPQRPRL TGQLFLGGSI VKGGPVQVLE DQELKSQPEP 401 450 ENSBTAP00000010644/1-472 LVVKGKRVAG GPQMIQLSLD GTRLYVTTSL YSAWDKQFYP DLIREGSVML ENSTTRP00000006644/1-472 LVVKXXXXXX XXXXXXXXXX XXXXXXXTSL YSAWDKQFYP DLIREGSVML ENSP00000357861/1-472 LVVKGKRVAG GPQMIQLSLD GKRLYITTSL YSAWDKQFYP DLIREGSVML bmy_11115T0/1-485 LVIKGKQVAG GPQMIQLSLD GKRLYVTTSL YSAWDKQFYP DLIREGSVML BACU007251/1-442 LVVKGKQVAG GPQMIQLSLD GKRLYVTTSL YSAWDKQFYP DLIREGSVML 451 500 ENSBTAP00000010644/1-472 QIDVDTVRGG LKLNPNFLVD FGKEPLGPAL AHELRYPGGD CSSDIWL ENSTTRP00000006644/1-472 QIDVDTVKGG LKLNPNFLVD FGKEPLGPAL AHELRYPGGD CSSDIWL ENSP00000357861/1-472 QVDVDTVKGG LKLNPNFLVD FGKEPLGPAL AHELRYPGGD CSSDIWI bmy_11115T0/1-485 QIDVDTVKGG LKLNPNFLVD FGKEPLGPAL AHELRYPGGD CSSDIWL BACU007251/1-442 QIDVDTVKGG LKLNPNFLVD FGKEPLGPAL AHELRYPGGD CSSDIWL