KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:42 2014 Check: 00 .. Name: ENSP00000301452/1-264 Len: 266 Check: 5464 Weight: 1.00 Name: ENSBTAP00000010648/1-266 Len: 266 Check: 7634 Weight: 1.00 Name: ENSTTRP00000002187/1-264 Len: 266 Check: 5675 Weight: 1.00 Name: bmy_06923T0/1-239 Len: 266 Check: 799 Weight: 1.00 Name: BACU002576/1-231 Len: 266 Check: 4761 Weight: 1.00 // 1 50 ENSP00000301452/1-264 --MPSIFAYQ SSEVDWCESN FQYSELVAEF YNTFSNIPFF IFGPLMMLLM ENSBTAP00000010648/1-266 VEMPSVFAYQ SSEVDWCEPN FQYSQLVAEF YNTFSNVTFF IFGPLMTFLM ENSTTRP00000002187/1-264 --MPSIFAYQ SSEVDWCESN FQHWELVAEF YNTFSNVTFF IFGPLMMFLM bmy_06923T0/1-239 --MLTLY--- ---------- ---------- --QFSNVTFF IFGPLMMFLM BACU002576/1-231 ---------- ---------- ---------- ---FSNVTFF IFGPLMMFLM 51 100 ENSP00000301452/1-264 HPYAQKRSRY IYVVWVLFMI IGLFSMYFHM TLSFLGQLLD EIAILWLLGS ENSBTAP00000010648/1-266 RPYIQQRSRY LYVLFVLFTV TGLFSMYFHM TLSFLGQMLD EIAILWLLAS ENSTTRP00000002187/1-264 HPYVQKCSRY IYVTFILFTV VGLFSMYFHM TLSFLGQMLD EIAILWLLAS bmy_06923T0/1-239 HPYVQKRSRY IYVIFILFTV VGLFSMYFHM TLSFLGQMLD EIAILWLLAS BACU002576/1-231 HPYVQKRSRY IYVIFILFTV VGLFSMYFHM TLSFLGQMLD EIAILSLLAS 101 150 ENSP00000301452/1-264 GYSIWMPRCY FPSFLGGNRS QFIRLVFITT VVSTLLSFLR PTVNAYALNS ENSBTAP00000010648/1-266 GYSIWLPRCY FPAFLGQNRS RYSSLIIIIS LVSTFLSFLR PTINAYALNA ENSTTRP00000002187/1-264 GYSIWMPRCY FPAFLGENRP LYICLVITAT VVSTFLSFLT PMIDAYALNS bmy_06923T0/1-239 GYSIWMPRCY FPAFLGENRP QYICLVITTT VVSTFLSFLR PTINAYALNS BACU002576/1-231 GYSIWMPRCY FPAFLGENRP QYICLVITTT VVSTFLAFLR PTTNAYALNT 151 200 ENSP00000301452/1-264 IALHILYIVC QEYRKTSNKE LRHLIEVSVV LWAVALTSWI SDRLLCSFWQ ENSBTAP00000010648/1-266 IGLHIIYIVV QEYKKTKNKE LQHLIEVSTV IWALAFTSWI SDRLLCSFWQ ENSTTRP00000002187/1-264 IALHVVYVVA QEYKKTSNKE LRRLIEVTMV SWAFAFTSWI SDRWLCSFWQ bmy_06923T0/1-239 IALHIVYIVA QEYKKTSNKE LRHLIEVTMV LWAFAFTSWI SDRLLCSFWQ BACU002576/1-231 IALHIVYIVA QEYKKTSNKE LRHLIEVTMV LWAFAFTSWI SDRLLCSFWQ 201 250 ENSP00000301452/1-264 RIHFFYLHSI WHVLISITFP YGMVTMALVD ANYEMPGETL KVRYWPRDSW ENSBTAP00000010648/1-266 WINFSYLHSI WHVLISFTFP YGMVILALVD SEYEMPNKTL KVRYWPRDTW ENSTTRP00000002187/1-264 WINFSYLHSI WHVLISIPFP YGTVIMAMVD ATYEMPDKTL KVCYWPRDTW bmy_06923T0/1-239 WINFSYLHSI WHVLISITFP YGIVTMAMVD ATYEMPDKTL KVCYWPRDTW BACU002576/1-231 WINFSYLHSI WH--ISITFP YGTVTMAMAD ATYEMPDKTL KVCYWPQDTW 251 300 ENSP00000301452/1-264 PVGLPYVEIR GDDKDC ENSBTAP00000010648/1-266 PMGLPYVEMG DDHKSC ENSTTRP00000002187/1-264 SMGLPYVEIS DDNKSC bmy_06923T0/1-239 PMGLPYVEIS DDNKSC BACU002576/1-231 PMGLPYVEMS DDKKSC