KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:41:43 2014  Check: 00 ..

 Name: ENSTTRP00000014845/1-236  Len:    248  Check:  9006  Weight:  1.00
 Name: bmy_00235T0/1-195         Len:    248  Check:  9512  Weight:  1.00
 Name: ENSP00000348538/1-239     Len:    248  Check:  644  Weight:  1.00
 Name: ENSBTAP00000010660/1-239  Len:    248  Check:  608  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000014845/1-236  -MLXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 
bmy_00235T0/1-195         MLLQPAPCAP SAGFPRPPAA LGA------- -------VGG LPYHTTDASL 
ENSP00000348538/1-239     MLLQPAPCAP SAGFPRPLAA PGAMHGSQKD TTFTKIFVGG LPYHTTDASL 
ENSBTAP00000010660/1-239  MLLQPAPCAP SAGFSRPPAA PGAMHGSQKD TTFTKIFVGG LPYHTTDASL 


                          51                                                 100
ENSTTRP00000014845/1-236  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XCKD-NPNMD 
bmy_00235T0/1-195         RKYFEGFGDI EEAVVITDRQ TGKSRGYGFV TMADRAAAER ACKDPNPNID 
ENSP00000348538/1-239     RKYFEGFGDI EEAVVITDRQ TGKSRGYGFV TMADRAAAER ACKDPNPIID 
ENSBTAP00000010660/1-239  RKYFEGFGDI EEAVVITDRQ TGKSRGYGFV TMADRAAAER ACKDPNPNID 


                          101                                                150
ENSTTRP00000014845/1-236  GRKANVNLAY LG-KPRSLQT GFAIGVQQLH PTLIQRTYGL TPHYIYPQAI 
bmy_00235T0/1-195         GRKANVNLAY LGAKPRSLQT GFAIGVQQLH PTLIQRTYGW RQL-----VT 
ENSP00000348538/1-239     GRKANVNLAY LGAKPRSLQT GFAIGVQQLH PTLIQRTYGL TPHYIYPPAI 
ENSBTAP00000010660/1-239  GRKANVNLAY LGAKPRSLQT GFAIGVQQVP PTLIQRTYGL TPHYIYPQAI 


                          151                                                200
ENSTTRP00000014845/1-236  VQPSVVIPAA PVPSLSSPYI ---------E YTPASPAYAQ YPPATYDQYP 
bmy_00235T0/1-195         ADRSNVCEAA TVVSLSVAII WDKSLDLASE HHRNESGRPI APPSSY---- 
ENSP00000348538/1-239     VQPSVVIPAA PVPSLSSPYI ---------E YTPASPAYAQ YPPATYDQYP 
ENSBTAP00000010660/1-239  VQPSVVIPAA PVPPLSSPYI ---------E YTPASPAYAQ YPPATYDQYP 


                          201                                                250
ENSTTRP00000014845/1-236  YAASPATAAS FVSYGYPAAV PQALSAAAPA GTAFVQYQPQ QLQPDRMQ 
bmy_00235T0/1-195         ---------- ---------- ---LELTGSS GLR----SPD NPTPA--- 
ENSP00000348538/1-239     YAASPATAAS FVGYSYPAAV PQALSAAAPA GTTFVQYQAP QLQPDRMQ 
ENSBTAP00000010660/1-239  YAASPATAAS FVGYSYPAAV PQALSAAAPA GTTFLQYQPP QLQPDRMQ