KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:48 2014 Check: 00 .. Name: ENSP00000359688/1-349 Len: 703 Check: 8047 Weight: 1.00 Name: BACU004601/1-672 Len: 703 Check: 6492 Weight: 1.00 Name: bmy_22168T0/1-378 Len: 703 Check: 8296 Weight: 1.00 Name: ENSTTRP00000000742/1-349 Len: 703 Check: 194 Weight: 1.00 Name: ENSBTAP00000010676/1-349 Len: 703 Check: 589 Weight: 1.00 // 1 50 ENSP00000359688/1-349 ---------- ---------- ---------- -MAKAGDKSS SSGKKSLKRK BACU004601/1-672 ---------- ---------- ---------- -MAKAGDKSG GSGNKGLKRK bmy_22168T0/1-378 TFPTPEVIAY GRGSEEKATS VSVQTTRSKN TMAKAGDKSG GSGNKGLKRK ENSTTRP00000000742/1-349 ---------- ---------- ---------- -MAKAGEKSG GSGNKGLKRK ENSBTAP00000010676/1-349 ---------- ---------- ---------- -MAKAGDKSG GSGKKGLKRK 51 100 ENSP00000359688/1-349 AAAEELQEAA GAGDGATENG VQPPKAAAFP PGFSISEIKN KQRRHLMFTR BACU004601/1-672 AATEERQEAA VAEDGTTESG VQPSKAAAFP PGFSVSEIKN KQRRHLMFTR bmy_22168T0/1-378 AATEERQEAA VAEDGTTESG VQPSKAAAFP PGFSVSEIKN KQRRHLMFTR ENSTTRP00000000742/1-349 AATEEPQEAA VAEDGTTESG VQPSKAAAFP PGFSVSEIKN KQRRHLMFTR ENSBTAP00000010676/1-349 AATEESQEAA VGEDGTTESG VQPPKTAAFP PGFSISEIKN KQRRHLMFTR 101 150 ENSP00000359688/1-349 WKQQQRKEKL AAKKKLKKER EALGDKAPPK PVPKTIDNQR VYDETTVDPN BACU004601/1-672 WKQQQRKEKL AAKKKLKKER EALGDKAPPK PIPKTIDNQR VYDETTVDPN bmy_22168T0/1-378 WKQQQRKEKL AAKKKLKKER EALGDKAPPK PIPKTIDNQR VYDETTVDPN ENSTTRP00000000742/1-349 WKQQQRKEKL AAKKKLKKER EALGDKAPPK PIPKTIDNQR VYDETTVDPN ENSBTAP00000010676/1-349 WKQQQRKEKL AAKKKLKKER EALGDKAPPK PVPKTIDNQR VYDETIVDPN 151 200 ENSP00000359688/1-349 DEEVAYDEAT DEFASYFNKQ TSPKILITTS DRPHGRTVRL CEQLSTVIPN BACU004601/1-672 DEEVAYDEAT DEFASYFNRQ TSPKILITTS DRPHGRTVRL CEQLSTVIPN bmy_22168T0/1-378 DEEVAYDEAT DEFASYFNRQ TSPKILITTS DRPHGRTVRL CEQLSTVIPN ENSTTRP00000000742/1-349 DEEVAYDEAT DEFASYFNRQ TSPKILITTS DRPHGRTVRL CEQLSTVIPN ENSBTAP00000010676/1-349 DEEVAYDEAT DEFASYFNRQ TSPKILITTS DRPHGRTVRL CEQLSTVIPN 201 250 ENSP00000359688/1-349 SHVYYRRGLA LKKIIPQCIA RDFTDLIVIN EDRKTPNGLI LSHLPNGPTA BACU004601/1-672 SHVYYRRGLA LKKIIPQCIS RDFTDLIVIN EDRKIPNGLI LSHLPNGPTA bmy_22168T0/1-378 SHVYYRRGLA LKKIIPQCIS RDFTDLIV-- KYLKESDGLI LSHLPNGPTA ENSTTRP00000000742/1-349 SHVYYRRGLA LKKIIPQCIS RDFTDLIVIN EDRKIPNGLI LSHLPNGPTA ENSBTAP00000010676/1-349 SHVYYRRGLA LKKIIPQCIS RDFTDLIVIN EDRKIPNGLI LSHLPNGPTA 251 300 ENSP00000359688/1-349 HFKMSSVRLR KEIKRRGKDP TEHIPEIILN NFTTRLGHSI GRMFASLFPH BACU004601/1-672 HFKMSSVRLR KEIKRRGKEP TEHIPEIILN NFTTRLGHSV GRMFASLFPH bmy_22168T0/1-378 HFKMSSVRLR KEIKRRGKEP TEHIPEIILN NFTTRLGHSV GRMFASLFPH ENSTTRP00000000742/1-349 HFKMSSVRLR KEIKRRGKDP TEHIPEIILN NFTTRLGHSV GRMFASLFPH ENSBTAP00000010676/1-349 HFKMSSVRLR KEIKRRGKDP TEHIPEIILN NFTTRLGHSI GRMFASLFPH 301 350 ENSP00000359688/1-349 NPQFIGRQVA TFHNQRDYIF FRFHRYIFRS EKKVGIQELG PRFTLKLRSL BACU004601/1-672 NPQFTGRQVA TFHNQRDYIF FRFHRYIFKS EKKVGIQELG PRFTLKLRSL bmy_22168T0/1-378 NPQFTGRQVA TFHNQRDYIF FRFHRYIFKS EKKVGIQELG PRFTLKLRSL ENSTTRP00000000742/1-349 NPQFIGRQVA TFHNQRDYIF FRFHRYIFKS EKKVGIQELG PRFTLKLRSL ENSBTAP00000010676/1-349 NPQFIGRQVA TFHNQRDYIF FRFHRYIFKS EKKVGIQELG PRFTLKLRSL 351 400 ENSP00000359688/1-349 QKGTFDSKYG EYEWVHKP-- ---------- ---------- ---------- BACU004601/1-672 QKGTFDSKYG EYEWVHKALQ PELYLLPIMD HLGNIYSASS AVSLDAQQTN bmy_22168T0/1-378 QKGTFDSKYG EYEWVHKP-- ---------- ---------- ---------- ENSTTRP00000000742/1-349 QKGTFDSKYG EYEWVHKP-- ---------- ---------- ---------- ENSBTAP00000010676/1-349 QKGTFDSKYG EYEWVHKP-- ---------- ---------- ---------- 401 450 ENSP00000359688/1-349 ---------- ---------- ---------- ---------- ---------- BACU004601/1-672 NGVAEADGII HRPLSVTLSK EEPGTDPSCL ENTLKKLLNK NQEEAGGKAT bmy_22168T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000742/1-349 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010676/1-349 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000359688/1-349 ---------- ---------- ---------- ---------- ---------- BACU004601/1-672 PNENQTGNNQ IGNAELPGSQ EDSDDDYFSG KKSQFLWKTE DDRTNIIRRE bmy_22168T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000742/1-349 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010676/1-349 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000359688/1-349 ---------- ---------- ---------- ---------- ---------- BACU004601/1-672 DNQLGKKECI SLPDLIDFPS VPCQPALSPG ITDILLLQIE RENIIEQMKQ bmy_22168T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000742/1-349 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010676/1-349 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000359688/1-349 ---------- ---------- ---------- ---------- ---------- BACU004601/1-672 VKEERKYLER IREELIKKVE RLLEQGKLKR YHACDVWKKK YFETKKVAAS bmy_22168T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000742/1-349 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010676/1-349 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000359688/1-349 ---------- ---------- ---------- ---------- ---------- BACU004601/1-672 LEEVLTKLRE DLELYYKKLL IQLGAREIKM RPKNLATITN SKNYLIIEIT bmy_22168T0/1-378 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000742/1-349 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010676/1-349 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000359688/1-349 ---------- REMDTSR--- ---------- ---------- ---RKFHL-- BACU004601/1-672 EVQHAIDQLK RKLDTDKMKL ITEIKVRKQA VSDLRTLKAE LAQKKFNTSF bmy_22168T0/1-378 ---------- REMDTSR--- ---------- ---------- ---RKFHL-- ENSTTRP00000000742/1-349 ---------- REMDTSR--- ---------- ---------- ---RKFHL-- ENSBTAP00000010676/1-349 ---------- REMDTSR--- ---------- ---------- ---RKFHL-- 701 750 ENSP00000359688/1-349 --- BACU004601/1-672 QSQ bmy_22168T0/1-378 --- ENSTTRP00000000742/1-349 --- ENSBTAP00000010676/1-349 ---