KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:41:49 2014 Check: 00 .. Name: ENSTTRP00000004548/1-957 Len: 957 Check: 8591 Weight: 1.00 Name: ENSBTAP00000010687/1-957 Len: 957 Check: 2956 Weight: 1.00 Name: bmy_11469T0/1-803 Len: 957 Check: 6741 Weight: 1.00 Name: BACU003058/1-952 Len: 957 Check: 9629 Weight: 1.00 // 1 50 ENSTTRP00000004548/1-957 MTLLLLFLLL GSRLPSSSCN KANKHKPWIE AEYQGIVMEN DNTVLLNPPL ENSBTAP00000010687/1-957 MTPLLFPLLL ASLLPSSSCN KANKHKPWIE AEYQGIVMEN DNTVLLNPPL bmy_11469T0/1-803 ---------M ADFLSSVLSP AANKHKPWIE AEYQGIVMEN DNTVLLNPPL BACU003058/1-952 MPLLLLLLSL GSLLPSSSCN KANKHKPWIE AEYQGIVMEN DNTVLLSPPL 51 100 ENSTTRP00000004548/1-957 FALDKDAPLR YAGEICGFRL HGSGVPFEAV ILDKATGEGL IRAKEPVDCE ENSBTAP00000010687/1-957 FALDKDAPLR YAGEICGFRL HGSGVPFEAV ILDKATGEGL IRAKEPVDCE bmy_11469T0/1-803 FALDKDAPLR YAGEICGFRL HGSGVPFEAV ILDKATGEGL IRAKEPVDCE BACU003058/1-952 FALDKDAPLR YAGEICGFRL HGSGVPFEAV ILDKATGEGL IRAKEPVDCE 101 150 ENSTTRP00000004548/1-957 AQKEHTFTIQ AYDCGEGPDG ANTKKSHKAT VHVRVNDVNE FAPVFVERLY ENSBTAP00000010687/1-957 AQKEHTFTIQ AYDCGEGPDG ANTKKSHKAT VHVRVNDVNE FAPVFVERLY bmy_11469T0/1-803 AQKEHTFTIQ AYDCGEGPDG ANTKKSHK-- ---------- ---------- BACU003058/1-952 AQKEHTFTIQ AYDCGEGPDG ANTKKSHKAT VHVRVNDVNE FAPVFVERLY 151 200 ENSTTRP00000004548/1-957 RAAVTEGKLY DRILRVEAID GDCSPQYSQI CYYEILTPNT PFLIDNDGNI ENSBTAP00000010687/1-957 RAAVTEGKLY DRILRVEAID GDCSPQYSQI CYYEILTPNT PFLIDNDGNI bmy_11469T0/1-803 ---------- ---------- ---------- ---------- ---------- BACU003058/1-952 RAAVTEGKLY DRILRVEAID GDCSPQYSQI CYYEILTPNT PFLIDNDGNI 201 250 ENSTTRP00000004548/1-957 ENTEKLQYSG EKLYKFTVTA YDCGKKRAVD DAEVEIQVKP TCKPSWQGWN ENSBTAP00000010687/1-957 ENTEKLQYSG EKLYKFTVTA YDCGKKRAAD DAEVEIQVKP TCKPSWQGWN bmy_11469T0/1-803 ---------- ---------- ---------- ---------- ---------- BACU003058/1-952 ENTEKLQYSG EKLYKFTVTA YDCGKKRAVD DAEVEIQVKP TCKPSWQGWN 251 300 ENSTTRP00000004548/1-957 KRIEYAPGAG SLALFPGIRL ETCDEPLWNI QATIELQTNH VAKGCDRDNY ENSBTAP00000010687/1-957 KRIEYAPGAG SLALFPGIRL ETCDEPLWNI QATIELQTSH VAKGCDRDNY bmy_11469T0/1-803 --IEYAPGAG SLALFPGIRL ETCDEPLWNI QATIELQTNH VAKGCDRDNY BACU003058/1-952 KRIEYAPGAG SLALFPGIRL ETCDEPLWNI QATIELQTNH VAKGCDRDNY 301 350 ENSTTRP00000004548/1-957 SERALRKLCX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000010687/1-957 SERALRKLCG AAPGEVDLLP MPGPNANWTA GLSVHYSQDS SLIYWFNGTQ bmy_11469T0/1-803 SERALRKLCG AAPGEVDLLP MPGPNANWTA GLSVHYSQDS SLIYWFNGTQ BACU003058/1-952 SERALRKLCG AAPGEVDLLP MPGPNANWTA GLSVHYSQDS SLIYWFNGTQ 351 400 ENSTTRP00000004548/1-957 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000010687/1-957 AVQVPLGGAA GLGSGPPDSL SDHFTLSFWM KHGVTPNKGK KEEETIVCNT bmy_11469T0/1-803 AVQVPLGGTA GLGSGPQDSL SDHFTLSFWM KH-------- ---------- BACU003058/1-952 AVQVPLGGTA GLGSGPQDSL SDHFTLSFWM KHGITPNKGK KEEETIVCNT 401 450 ENSTTRP00000004548/1-957 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XVCDDEWHHY ENSBTAP00000010687/1-957 VQNEDGFSHY SLTVHGCRIA FLYWPLLESA RPVKFLWKLE QVCDDEWHHY bmy_11469T0/1-803 ---EDGFSHY SLTVHGCRIA FLYWPLLESA RPVKFLWKLE QVCDDEWHHY BACU003058/1-952 VPNEDGFSHY SLTVHGCRIA FLYWPLLESA RPVKFLWKLE QVCDDEWHHY 451 500 ENSTTRP00000004548/1-957 ALNLEFPTVT LYADGISFDP ALIHDNGLIH PPRREPALMI GACWAEEKNK ENSBTAP00000010687/1-957 ALNLEFPTVT LYADGISFDP ALIHDNGLIH PPRREPALMI GACWAEEKNK bmy_11469T0/1-803 ALNLEFPTVT LYADGISFDP ALIHDNGLIH PPRREPALMI GACWTEEKNK BACU003058/1-952 ALNLEFPTVT LYADGISFDP ALIHDNGLIH PPRREPALMI GACWTEEKNK 501 550 ENSTTRP00000004548/1-957 EKEKGGDNST DATAGDPLPI HHYFHGYLAG FSVRSGRLES REVIECLYAC ENSBTAP00000010687/1-957 EKEKGGDNST DATAGDPLPI HHYFHGYLAG FSVRSGRLES REVIECLYAC bmy_11469T0/1-803 EKEKGGDNST DATAGDPLPI HHYFHGYLAG FSVRSGRLES REVIECLYAC BACU003058/1-952 EKEKGGDNST DATAGDPLPI HHYFHGYLAG FSVRSGRLES REVIECLYAC 551 600 ENSTTRP00000004548/1-957 REGLDYRDFE SLGKGMKVHV NPSQSLLTLE GDDVETFNHA LQHVAYMNTL ENSBTAP00000010687/1-957 REGLDYRDFE SLGKGMKVHV NPSQSLLTLE GDDVETFNHA LQHVAYMNTL bmy_11469T0/1-803 REGLDYRDFE SLGKGMKVHV NPSQSLLTLE GDDVETFNHA LQHVAYMNTL BACU003058/1-952 REGLDYRDFE SLGKGMKVHV NPSQSLLTLE GDDVETFNHA LQHVAYMNTL 601 650 ENSTTRP00000004548/1-957 RFATPGVRPL RLTTAVKCFS EESCVSIPDV EGYVVVLQPD APQILLSGTA ENSBTAP00000010687/1-957 RFATPGVRPL RLTTAVKCFS EESCVSIPEV EGYVVVLQPD APQILLSGTA bmy_11469T0/1-803 RFATPGVRPL RLTTAVKCFS EESCVSIPEV EGYVVVLQPD APQILLSGTA BACU003058/1-952 RFATPGVRPL RLTTAVKCFS EESCVSIPEV EGYVVVLQPD APQILLSGTA 651 700 ENSTTRP00000004548/1-957 HFALPAVDFE GPEGVPLFPD LQITCSISHQ VEAKKDESWQ GTVTDTRMSD ENSBTAP00000010687/1-957 HFARPAVDFE GPEGVPLFPD LQITCSISHQ VEAKKDESWQ GTVTDTRMSD bmy_11469T0/1-803 HFALPAVDFE GPEGVPLFPD LQITCSISHQ VEAKKDESWQ GTVTDTRMSE BACU003058/1-952 HFALPAVDFE GPEGVPLFPD LQITCSISHQ VEAKKDESWQ GTVTDTRMSD 701 750 ENSTTRP00000004548/1-957 EIVHNLDGCE ISLVGDDLDP ERESLLLDVA SLQQRGLELT NTSAYLTIAG ENSBTAP00000010687/1-957 EIVHNLDGCE ISLVGDDLDP ERESLLLDMA SLQQRGLELT NTSAYLTIAG bmy_11469T0/1-803 EIVHNLDGCE ISLVGDDLDP ERESLLLDMA SLQQRGLELT NTSAYLTIAG BACU003058/1-952 EIVHNLDGCE ISLVGDDLDP ERESLLLDMA SLQQRGLELT NTSAYLTIAG 751 800 ENSTTRP00000004548/1-957 VEGITVYEEI LRLARYRLRR GAALYARKFR LSCSEMNGRY SSNEFVMEVS ENSBTAP00000010687/1-957 VESITVYEEI LRQARYRLRH GAALYARKFR LSCSEMNGRY SSNEFIVEVS bmy_11469T0/1-803 VEGITVYEEI LRLARYRLRR GAALYARKFR LSCSEMNGRY SSNEFVVEVS BACU003058/1-952 VEGITVYEEI LRLARYRLRR GAALYARKFR LSCSEMNGRY SSNEFVVEVS 801 850 ENSTTRP00000004548/1-957 VLHSVNRVTH PSHMLSSQQF LHRGHQPPPE MAGHSLASSH RNSMVPSAAT ENSBTAP00000010687/1-957 VLHSVNRVAH PSHMLSSQQF LHRGHQPPPE MAGHSLASSH RNSMVPSAAT bmy_11469T0/1-803 VLHSVNRVTH PSHMLSSQQF LHRGHQPPPE MAGHSLASSH RNSMVPSAAT BACU003058/1-952 VLHSVNRVTH PSHMLSSQQF LHRGHQPPPE MAGHSLASSH RNSMVPSAAT 851 900 ENSTTRP00000004548/1-957 LIIVVCVGFL VLMVVLGLVR IHSLHRRVSG AGGPPGGSSD PKDPDLFWDD ENSBTAP00000010687/1-957 LIIVVCVGFL VLMVVLGLVR IHSLHRRVSG ASGPPGASSD PKDPDLFWDD bmy_11469T0/1-803 LIIVVCVGFL VLMVVLGLVR IHSLHRRVSG AGGPPGASSD PKDPDLFWDD BACU003058/1-952 LIIVVCVGFL VLMVVLGLVR IHSLHRRVSG AGGPPGASSD PKDPDLFWDD 901 950 ENSTTRP00000004548/1-957 SALTIIVNPM ESYQGRQTSM AGAAGSQQED EDSSDSEAAD SPSSDERRII ENSBTAP00000010687/1-957 SALTIIVNPM ESYQSRQVCV AGAAGGQQDD EDSSDSEAAD SPSSDERRII bmy_11469T0/1-803 SALTIIVNPM ESYQSRQASM AGTAGSQQED EDSSDSEAAD SPSSDERRII BACU003058/1-952 SALTII---- -SYQSRQASM AGAAGSQQED EDSSDSEAAD SPSSDERRII 951 1000 ENSTTRP00000004548/1-957 ETPPHRY ENSBTAP00000010687/1-957 ETPPHRY bmy_11469T0/1-803 ETPPHRY BACU003058/1-952 ETPPHRY