KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:53 2014 Check: 00 .. Name: ENSP00000358297/1-304 Len: 341 Check: 3250 Weight: 1.00 Name: ENSTTRP00000008742/1-292 Len: 341 Check: 4548 Weight: 1.00 Name: bmy_13819T0/1-253 Len: 341 Check: 6948 Weight: 1.00 Name: BACU009445/1-217 Len: 341 Check: 1023 Weight: 1.00 Name: ENSBTAP00000010691/1-293 Len: 341 Check: 4413 Weight: 1.00 // 1 50 ENSP00000358297/1-304 MAEASAAGAD SGAAVAAHRF FCHFCKGEVS PKLPEYICPR CESGFIEEVT ENSTTRP00000008742/1-292 MAEASAAGAG AGAAVAAHRF FCHFCKGEVS PKLPEYICPR CESGFIEEMT bmy_13819T0/1-253 ---------- ---------- ---------- ---------- ---------- BACU009445/1-217 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010691/1-293 MAEASAAGAG AGSAVAAHRF FCHFCKGEVS PKLPRGICPR CESGFIEEVT 51 100 ENSP00000358297/1-304 DDSSFLGGGG SRIDNTTTTH FAELWGHLDH TMFFQDFRPF LSSSPLDQDN ENSTTRP00000008742/1-292 DDSSFLGGGS S-----TSTH FAEFWDHLDP TMFFQDFRPF LSSSLLDQDN bmy_13819T0/1-253 ---------- ---------- ---------- -MFFQDFRPF LSSSLLDQDN BACU009445/1-217 ---------- ---------- ---------- -MFFQDFRPF LSSSLLDQDN ENSBTAP00000010691/1-293 DDSSFLGGGS S-----TSTQ FSEFWDRLDP TMFFQDFRPF LSSSLLDQDN 101 150 ENSP00000358297/1-304 RANERGHQTH TDFWG-ARPP RLPLGRRYRS RGSSRPDRSP AIEGILQHIF ENSTTRP00000008742/1-292 RANERGHQTH TDFWGPSRPP RLSVTQRYRS RGSTRPDRSP AFERVLQQII bmy_13819T0/1-253 RANERGHQTH TDFWGPSRPP RLSVTQRYRS RGSTRPDRSP AFERVLQQII BACU009445/1-217 RANERGHQTH TDFWGPSRPP RLSVTQRYRS RGSTRPDRSP AFERVLQQII ENSBTAP00000010691/1-293 RANERSHQTH TDFWGPSRPP RLSVTQRYRS RGSTRPERSP AFERVLQQII 151 200 ENSP00000358297/1-304 AGFFANSAIP GSPHPFSWSG MLHSNPGDYA WGQTGLDAIV TQLLGQLENT ENSTTRP00000008742/1-292 AGF-----IP GS--PFSWSG MLHSNPGDYA WGQTGLDAIV TQXXXXXXNT bmy_13819T0/1-253 AGF-----IP GS--PFSWSG MLHSNPGDYA WGQTGLDAIV TQLLGQLENT BACU009445/1-217 AGF-----IP GS--PFSWSG MLHSNPGDYA WGQTGLDAIV TQLLGQLENT ENSBTAP00000010691/1-293 AGF-----IP GS--PFSWSG MLHSNPGDYA WGQTGLDAIV TQLLGQLENT 201 250 ENSP00000358297/1-304 GPPPADKEKI TSLPTVTVTQ EQV------- ---------- ---------- ENSTTRP00000008742/1-292 GPPPADKE-I TSLPTVTVTQ EQV------- ---------- ---------- bmy_13819T0/1-253 GPPPADKEKI TSLPTVTVTQ EQVESEDFKD RMGHLREIIL YMGKYEPMKN BACU009445/1-217 GPPPADKEKI TSLPTVTVTQ EQV------- ---------- ---------- ENSBTAP00000010691/1-293 GPPPADKEKI TSLPTVTVTQ EQV------- ---------- ---------- 251 300 ENSP00000358297/1-304 ---------D MGLECPVCKE DYTVEEEVRQ LPCNHFFHSS CIVPWLELHD ENSTTRP00000008742/1-292 ---------D RGLECPVCKE DYTVEEKVRQ LPCNHFFHSS CIVPWLELHD bmy_13819T0/1-253 VSMDMVSGSD KGLECPVCKE DYTVEEEVRQ LPCNHFFHSS CIVPWLELHD BACU009445/1-217 ---------D KGLECPVCKE DYTVEEEVRQ LPCNHFFHSS CIVPWLELHD ENSBTAP00000010691/1-293 ---------D KGLECPVCKE DYTVEEEVRQ LPCNHYFHSS CIVPWLELHD 301 350 ENSP00000358297/1-304 TCPVCRKSLN GEDSTRQSQS TEASASNRFS NDSQLHDRWT F ENSTTRP00000008742/1-292 ACPVCRKSLN GEDSTQQTQT SGSSASNRFS SDSQLHDRWT F bmy_13819T0/1-253 ACPVCRKSLN GEDSTQQTQT SGPSASNRFS SDSQLHDRWT F BACU009445/1-217 ACPVCRKSLN GEDSTQQTQT SGPSASNRFS SDSQLHDRWT F ENSBTAP00000010691/1-293 ACPVCRKSLN GEDSTQQTQR SGASASNRFS SDSQLHDRWT F