KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:54 2014 Check: 00 .. Name: ENSTTRP00000008315/1-621 Len: 665 Check: 6496 Weight: 1.00 Name: ENSBTAP00000010692/1-622 Len: 665 Check: 5940 Weight: 1.00 Name: ENSP00000356172/1-622 Len: 665 Check: 6637 Weight: 1.00 Name: bmy_11871T0/1-614 Len: 665 Check: 2453 Weight: 1.00 Name: BACU001095/1-656 Len: 665 Check: 2392 Weight: 1.00 // 1 50 ENSTTRP00000008315/1-621 ---------- ---------- ---------- ---------- -MSMRSPGSA ENSBTAP00000010692/1-622 ---------- ---------- ---------- ---------- -MSMRSPGSA ENSP00000356172/1-622 ---------- ---------- ---------- ---------- -MSMRSPISA bmy_11871T0/1-614 ---------- ---------- ---------- ---------- -MSMRSPGSA BACU001095/1-656 MERAGAAPAA PPPPGWPLRF PGLITSPHSW KQAPFLHPLL MMSMRSPGSA 51 100 ENSTTRP00000008315/1-621 QLALDDVGTM VNCTVKSEGK KEPCHEAPQG LATAAEPQPG DPARAPQDGA ENSBTAP00000010692/1-622 QLVLDEVGTM VNCTVKAEGK KEPCYEDPQG SATAAESQPG DPARTPQNGA ENSP00000356172/1-622 QLALDGVGTM VNCTIKSEEK KEPCHEAPQG SATAAEPQPG DPARASQDSA bmy_11871T0/1-614 QLALDDVGTM VNCTVKSEGK KEPCHEAPQG LATAAEPQPG DPARAPQDGA BACU001095/1-656 QLALDDVGTM VNCTVKSEGK KEPCHEAPQG LATAAEPQPG DPARAPQDGA 101 150 ENSTTRP00000008315/1-621 DPPAPAQVPS TLRGSWDSSS LESNGSPEPK RPGGSEAASG SQEKLDFNRN ENSBTAP00000010692/1-622 DPQAPTQ--R NRAGSWDSSS LENSESPEPR RPGGSEAASG SQEKLDFNRN ENSP00000356172/1-622 DPQAPAQ--G NFRGSWDCSS PEGNGSPEPK RPGVSEAASG SQEKLDFNRN bmy_11871T0/1-614 DPQAPAQ--- ------DSSS LESNGSPEPK RPGVSEAASG SQEKLDFNRN BACU001095/1-656 DPQAPAQ--- ------DSSS LESNGSPEPK RPGGSEAASG SQEKLDFNRN 151 200 ENSTTRP00000008315/1-621 LKEVVPAIEK LLSSDWKERF LGRSCVETKD VKGTQESLAE KELQLLVMIH ENSBTAP00000010692/1-622 LKEVVPAIEK LLSSGWKEKF LGRSSVETKD VKGTKESLAE KELQLLVMIH ENSP00000356172/1-622 LKEVVPAIEK LLSSDWKERF LGRNSMEAKD VKGTQESLAE KELQLLVMIH bmy_11871T0/1-614 LKEVVPAIEK LLSSDWKERF LGRSCVETKD VKGTQESLAE KELQLLVMIH BACU001095/1-656 LKEVVPAIEK LLSSDWKERF LGRSCVETKD VKGTQESLAE KELQLLVMIH 201 250 ENSTTRP00000008315/1-621 QLSTLRDQLL TAHSEQKNMA AMLFEKQQQQ MELARQQQEQ XXXXXXXXXX ENSBTAP00000010692/1-622 QLSALRDQLL TAHSEQKNMA AMLLEKQQQQ MELARQQQEQ IAKQQQQLIQ ENSP00000356172/1-622 QLSTLRDQLL TAHSEQKNMA AMLFEKQQQQ MELARQQQEQ IAKQQQQLIQ bmy_11871T0/1-614 QLSTLRDQLL TAHSEQKNMA AMLFEKQQQQ MELARQQQEQ IAKQQQQLIQ BACU001095/1-656 QLSTLRDQLL TAHSEQKNMA AMLFEKQQQQ MELARQQQEQ IAKQQQQLIQ 251 300 ENSTTRP00000008315/1-621 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XLP-QPI-C- ENSBTAP00000010692/1-622 QQHKINLLQQ QIQQVNMPYV MIPAFPPSHQ PLPVTPDSQL ALPIQPIPCK ENSP00000356172/1-622 QQHKINLLQQ QIQQVNMPYV MIPAFPPSHQ PLPVTPDSQL ALPIQPIPCK bmy_11871T0/1-614 QQHKINLLQQ QI-QVNMPYV MIPAFPPSHQ PLPVTPDSQL ALPIQPIPCK BACU001095/1-656 QQHKINLLQQ QIQQVNMPYV MIPAFPPSHQ PLPVTPDSQL ALPIQPIPCK 301 350 ENSTTRP00000008315/1-621 SMEYPLQLLH SPAAPVVKRP GALSAHHALQ EPSQPLNLTA KPKAPELPNA ENSBTAP00000010692/1-622 PVEYPLQLLH SPPAPVVKRP GALPAHHPLQ EPSQPLNLTA KPKASELPNS ENSP00000356172/1-622 PVEYPLQLLH SPPAPVVKRP GAMATHHPLQ EPSQPLNLTA KPKAPELPNT bmy_11871T0/1-614 PVEYPLQLLH SPAAPVVKRP GALSAHHPLQ EPSQPLNLTA KPKAPELPNA BACU001095/1-656 PVEYPLQLLH SPAAPVVKRP GALSAHHPLQ EPSQPLNLTA KPKAPELPNA 351 400 ENSTTRP00000008315/1-621 SSSPSLKMSN CGPRPPSRGA PTRDLQASPP SMPLGFLGEG DAVTKAIQDA ENSBTAP00000010692/1-622 SSSPNLKLSN CGPRPPSHGA PTLDLQANPP SLPLGFLGEG DAVTKAIQDA ENSP00000356172/1-622 SSSPSLKMSS CVPRPPSHGG PTRDLQSSPP SLPLGFLGEG DAVTKAIQDA bmy_11871T0/1-614 SSSPSLKMSN CGPRPPSHGA PTRDLQASPP SLPLGFLGEG DAVTKAIQDA BACU001095/1-656 SSSPSLKMSN CGPRPPSHGA PTRDLQASPP SLPLGFLGEG DAVTKAIQDA 401 450 ENSTTRP00000008315/1-621 RQLLHGHSGA LESPPNTSFR KDLISLDTSP AKERLEESCV HPLEEAMLGC ENSBTAP00000010692/1-622 RQLLHGHSGA LDTSPSAPFR KDLISVDTSP AKERLEDSCV HPLEEAMLGC ENSP00000356172/1-622 RQLLHSHSGA LDGSPNTPFR KDLISLDSSP AKERLEDGCV HPLEEAMLSC bmy_11871T0/1-614 RQLLHGHSGA LESSPNTSFR KDLISLDTSP AKERLEESCV HPLEEAMLGC BACU001095/1-656 RQLLHGHSGA LESSPNTSFR KDLISLDTSP AKERLEESCV HPLEEAMLGC 451 500 ENSTTRP00000008315/1-621 DVDGSRHFPE SRNSSHIKRP MNAFMVWAKD ERRKILQAFP DMHNSSISKI ENSBTAP00000010692/1-622 DMDGSRHFPE SRNSSHIKRP MNAFMVWAKD ERRKILQAFP DMHNSSISKI ENSP00000356172/1-622 DMDGSRHFPE SRNSSHIKRP MNAFMVWAKD ERRKILQAFP DMHNSSISKI bmy_11871T0/1-614 DVDGSRHFPE SRNSSHIKRP MNAFMVWAKD ERRKILQAFP DMHNSSISKI BACU001095/1-656 DVDGSRHFPE SRNSSHIKRP MNAFMVWAKD ERRKILQAFP DMHNSSISKI 501 550 ENSTTRP00000008315/1-621 LGSRWKSMTN QEKQPYYEEQ ARLSRQHLEK YPDYKYKPRP KRTCIVEGKR ENSBTAP00000010692/1-622 LGSRWKSMSN QEKQPYYEEQ ARLSRQHLEK YPDYKYKPRP KRTCIVEGKR ENSP00000356172/1-622 LGSRWKSMTN QEKQPYYEEQ ARLSRQHLEK YPDYKYKPRP KRTCIVEGKR bmy_11871T0/1-614 LGSRWKSMTN QEKQPYYEEQ ARLSRQHLEK YPDYKYKPRP KRTCIVEGKR BACU001095/1-656 LGSRWKSMTN QEKQPYYEEQ ARLSRQHLEK YPDYKYKPRP KRTCIVEGKR 551 600 ENSTTRP00000008315/1-621 LRVGEYKALM RTRRQDARQS YTTPPQASQV QMSPSDVLYP RVAGVPLAQP ENSBTAP00000010692/1-622 LRVGEYKALM RTRRQDARQS YATPQQTSQV QMSPSEVLYP RVAGVPLAQP ENSP00000356172/1-622 LRVGEYKALM RTRRQDARQS YVIPPQAGQV QMSSSDVLYP RAAGMPLAQP bmy_11871T0/1-614 LRVGEYKALM RTRRQDARQS YTTPPQASQV QMSPSDVLYP RVAGVPLAQP BACU001095/1-656 LRVGEYKALM RTRRQDARQS YTTPPQASQV QMSPSDVLYP RVAGVPLAQP 601 650 ENSTTRP00000008315/1-621 LVEHYVPRSL DPNMPVIVNT CSLREEGEGT EDRHSVADGE MYRYSEDEDS ENSBTAP00000010692/1-622 LVEHCVPRGL DPNMPVIVNT CSLREEGEGT EDRHSAADGE VYRYSEDEDS ENSP00000356172/1-622 LVEHYVPRSL DPNMPVIVNT CSLREEGEGT DDRHSVADGE MYRYSEDEDS bmy_11871T0/1-614 LVEHYVPRGL DPNMPVIVNT CSLREEGEGT EDRHSVADGE MYRYSEDEDS BACU001095/1-656 LVEHYVPRGL DPNMPVIVNT CSLREEGEGT EDRHSVADGE MYRYSEDEDS 651 700 ENSTTRP00000008315/1-621 EAEEKSDGEL VVLTD ENSBTAP00000010692/1-622 EGEEKSDGEL VVLTD ENSP00000356172/1-622 EGEEKSDGEL VVLTD bmy_11871T0/1-614 EAEEKSDGEL VVLTD BACU001095/1-656 EAEEKSDGEL VVLTD