KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:55 2014 Check: 00 .. Name: ENSTTRP00000013070/1-759 Len: 760 Check: 6380 Weight: 1.00 Name: ENSP00000188790/1-760 Len: 760 Check: 991 Weight: 1.00 Name: ENSBTAP00000010702/1-760 Len: 760 Check: 7783 Weight: 1.00 Name: bmy_06229T0/1-650 Len: 760 Check: 324 Weight: 1.00 Name: BACU010079/1-760 Len: 760 Check: 8349 Weight: 1.00 // 1 50 ENSTTRP00000013070/1-759 MKTWLKIVLG VATSAVLALL VMCIVLRPSR VHNSEGRTTR ALTLKDILNG ENSP00000188790/1-760 MKTWVKIVFG VATSAVLALL VMCIVLRPSR VHNSEENTMR ALTLKDILNG ENSBTAP00000010702/1-760 MKTWLKIVFG VATSAVLALL VMCIVLRPSR VHNSEESTTR ALTLKDILNG bmy_06229T0/1-650 ---------- ---------- ---------- ---------- ---------- BACU010079/1-760 MKTWLKIVLG VATSAVLALL VMCIVLRPSR VHKSEGSTTR ALTLKDILNG 51 100 ENSTTRP00000013070/1-759 TFSYKTFFPN WISGQEYLHQ STDNNIVFYN IETGESYTIL SNTTMKSVNA ENSP00000188790/1-760 TFSYKTFFPN WISGQEYLHQ SADNNIVLYN IETGQSYTIL SNRTMKSVNA ENSBTAP00000010702/1-760 TFSYKTFFPN WISGQEYLHQ STDNNVVFYN IETGESYTIL SNTTMKSVNA bmy_06229T0/1-650 ---------- ---------- ---------- ---------- ----MKSVNA BACU010079/1-760 TFSYKTFFPN WISGQEYLRQ STDNNIVFYN IETGESYTIL SNATMKSVNA 101 150 ENSTTRP00000013070/1-759 SNYGXXXXXX XXXXXXXXXX LWRYSYTATY HIYHLTNGEF IRRNELPRPI ENSP00000188790/1-760 SNYGLSPDRQ FVYLESDYSK LWRYSYTATY YIYDLSNGEF VRGNELPRPI ENSBTAP00000010702/1-760 SNYGLSPDRQ FAYLESDYSK LWRYSYTATY HIYDLTNGEF IRRNELPRPI bmy_06229T0/1-650 SNYGLSPDRQ FAYLESDYSK GY---YHNNY PAL-----EI LLHSNVSHLP BACU010079/1-760 SNYGLSPDRQ FAYLESDYSK LWRYSYTATY HIYHLTNGEF IRRNELPRPI 151 200 ENSTTRP00000013070/1-759 QYLCWSPVGS KLAYVYQNNI YLKQRPEDPP FQITYNGKEN KIFNGIPDWV ENSP00000188790/1-760 QYLCWSPVGS KLAYVYQNNI YLKQRPGDPP FQITFNGREN KIFNGIPDWV ENSBTAP00000010702/1-760 QYLCWSPVGS KLAYVYQNNI YLKQRPEDPP FQITYNGKEN KIFNGIPDWV bmy_06229T0/1-650 PY-------- KWAYVYQNNI YLKQRPEDPP FQITYNGKEN KIFNGIPDWV BACU010079/1-760 QYLCWSPVGS KLAYVYQNNI YLKQRPEDPP FQITYNGKEN KVFNGIPDWV 201 250 ENSTTRP00000013070/1-759 YEEEMLATKY ALWWSPNGKF LAYAEFNDTE IPVIAYSYYG DEQYPRTINI ENSP00000188790/1-760 YEEEMLATKY ALWWSPNGKF LAYAEFNDTD IPVIAYSYYG DEQYPRTINI ENSBTAP00000010702/1-760 YEEEMLATKY ALWWSPNGKF LAYAEFNDTE IPVIAYSYYG DEQYPRTINI bmy_06229T0/1-650 YEEEMLATKY ALWWSPNGKF LAYAEFNDTE IPVIAYSYYG DEQYPRTINI BACU010079/1-760 YEEEMLATKY ALWWSPNGKF LAYAEFNDTE IPVIAYSYYG DEQYPRTINI 251 300 ENSTTRP00000013070/1-759 PYPKAGAKNP IVRIFIVDAT YPEHVGPREA PVPAMIASSD YYFSWLTWVT ENSP00000188790/1-760 PYPKAGAKNP VVRIFIIDTT YPAYVGPQEV PVPAMIASSD YYFSWLTWVT ENSBTAP00000010702/1-760 PYPKAGAKNP VVRIFIIDAT YPEHIGPREV PVPAMIASSD YYFSWLTWVT bmy_06229T0/1-650 PYPKAGAKNP IVRIFIVDAT YPEHVGPREV PVPAMIASSD YYFSWLTWVT BACU010079/1-760 PYPKAGAKNP IVRIFIVDGT YPEHVGPREV PVPAMIASSD YYFSWLTWVT 301 350 ENSTTRP00000013070/1-759 DERICLQWLK RIQNISVLSI CDFREDWKTW SCPKTQEHIE ESRTGWAGGF ENSP00000188790/1-760 DERVCLQWLK RVQNVSVLSI CDFREDWQTW DCPKTQEHIE ESRTGWAGGF ENSBTAP00000010702/1-760 DDRICLQWLK RIQNVSVLST CDFREDWQTW NCPKTQEHIE ESRTGWAGGF bmy_06229T0/1-650 DERICLQWLK RIQNVSVLSI CDFREDWKTW SCPKTQEHIE ESRTGWDGGF BACU010079/1-760 DERICLQWLK RIQNVSVLSI CDFREDWKTW SCPKTQEHIE ESRTGWDGGF 351 400 ENSTTRP00000013070/1-759 FVSTPVFSYD AISYYKIFSD KNGYKHIHYI KDTVENAIQI TSGKWEAINI ENSP00000188790/1-760 FVSTPVFSYD AISYYKIFSD KDGYKHIHYI KDTVENAIQI TSGKWEAINI ENSBTAP00000010702/1-760 FVSTPVFSHD TISYYKIFSD KDGYKHIHYI RDTVENAIQI TSGKWEAINI bmy_06229T0/1-650 FVSTPAFSYD AISYYKIFSD KNGYKHIHYI KDTVENAIQI TSGKWEAINI BACU010079/1-760 FVSTPAFSYD AISYYKIFSD KNGYKHIHYI KDTVENAIQI TSGKWEAINI 401 450 ENSTTRP00000013070/1-759 FRVTQDSLXX XXXXXXXXXX XXXXXXISIG SYPPSKKCIT CHLRRKRCQY ENSP00000188790/1-760 FRVTQDSLFY SSNEFEEYPG RRNIYRISIG SYPPSKKCVT CHLRKERCQY ENSBTAP00000010702/1-760 FRVTQDSLFY SSNEFEGYPG RRNIYRISIG SHSPSKKCIT CHLRKKRCQY bmy_06229T0/1-650 FRVTQDSLFY SSNEFEGYPG RRNIYRISIG SYPPSKKCIT CHLRRKRCQY BACU010079/1-760 FRVTQDSLFY SSNEFEGYPG RRNIYRISIG SYPPSKKCIT CHLRRKRCQY 451 500 ENSTTRP00000013070/1-759 YTASFSDYAK YYALVCYGPG LPISTLHDGH TDQEIKILEE NKELENALKN ENSP00000188790/1-760 YTASFSDYAK YYALVCYGPG IPISTLHDGR TDQEIKILEE NKELENALKN ENSBTAP00000010702/1-760 YTASFSDYAK YYALVCYGPG LPISTLHDGR TDQEIKILED NKELENALKN bmy_06229T0/1-650 YTASFSDYAK YYALVCYGPG LPISTLHDGH TDQEIKILEE NKELENALKN BACU010079/1-760 YTASFSDYAK YYVLVCYGPG LPISTLHDGH TDQELKILEE NKELENALKN 501 550 ENSTTRP00000013070/1-759 IQLPKEEIKK LEVDDITLWY KMILPPRFDR SKKYPLLIQV YGGPCSQSVR ENSP00000188790/1-760 IQLPKEEIKK LEVDEITLWY KMILPPQFDR SKKYPLLIQV YGGPCSQSVR ENSBTAP00000010702/1-760 IQLPKEEIKK LKVDDITLWY KMILPPQFDK SKKYPLLIQV YGGPCSQSVR bmy_06229T0/1-650 IQLPKEEIKK LEVDDITLWY KMILPPQFDR SKKYPLLIQV YGGPCSQSVR BACU010079/1-760 IQLPKEEIKK LEVDDITLWY KMILPPQFDR SKKYPLLIQV YGGPCSQSVR 551 600 ENSTTRP00000013070/1-759 SVFSISWISY LASKEGIVIA LVDGRGTAFQ GDKLLYAVYR KLGVYEVEDQ ENSP00000188790/1-760 SVFAVNWISY LASKEGMVIA LVDGRGTAFQ GDKLLYAVYR KLGVYEVEDQ ENSBTAP00000010702/1-760 SIFAVSWISY LASKEGIVIA LVDGRGTAFQ GDKLLYAVYR KLGVYEVEDQ bmy_06229T0/1-650 SVFAISWISY LASKEGIVIA LVDGRGTAFQ GDKLLYAVYR KLGVYEVEDQ BACU010079/1-760 SVFAVSWISY LASKEGIVIA LVDGRGTAFQ GDKLLYAVYR KLGVYEVEDQ 601 650 ENSTTRP00000013070/1-759 ITAVRKFIEM GFIDEKRIAI WGWSYGGYVS SLALASGSGL FKCGIAVAPV ENSP00000188790/1-760 ITAVRKFIEM GFIDEKRIAI WGWSYGGYVS SLALASGTGL FKCGIAVAPV ENSBTAP00000010702/1-760 ITAVRKFIEM GFIDEKRIAI WGWSYGGYVS SLALASGTGL FKCGIAVAPV bmy_06229T0/1-650 ITAVRKFIEM GFIDEKRIAI WGWSYGGYVS SLALASGSGL FKCGIAVAPV BACU010079/1-760 ITAVRKFIEM GFIDEKRIAI WGWSYGGYVS SLALASGSGL FKCGIAVAPV 651 700 ENSTTRP00000013070/1-759 SSWEYYASIY TERFMGLPTK DDNLEHYKNS TVMARAE-FR NXXXXXXXXX ENSP00000188790/1-760 SSWEYYASVY TERFMGLPTK DDNLEHYKNS TVMARAEYFR NVDYLLIHGT ENSBTAP00000010702/1-760 SSWEYYASIY TERFMGLPTK DDNLKHYKNS TVMARAEYFR NVDYLLIHGT bmy_06229T0/1-650 SSWEYYASIY TERFMGLPTK DDNLEHYKNS TVMARAEYFR NVDYLLIHGT BACU010079/1-760 SSWEYYASIY TERFMGLPTK DDNLEHYKNS TVMARAEYFR NVDYLLIHGT 701 750 ENSTTRP00000013070/1-759 XXXXXXXXXX XXXXXXXXXX XXXXXXXWYS DQNHGISGLS TKHLYTHMTH ENSP00000188790/1-760 ADDNVHFQNS AQIAKALVNA QVDFQAMWYS DQNHGLSGLS TNHLYTHMTH ENSBTAP00000010702/1-760 ADDNVHFQNS AQIAKALVNA QVDFQAMWYS DQNHGLSGLS TKHLYTHMTH bmy_06229T0/1-650 ADDNVHFQNS AQIAKALVNA QVDFQAMWYS DQNHGISGLS TKHLYTHMTH BACU010079/1-760 ADDNVHFQNS AQIAKALVNA QVDFQAMWYS DQNHGISGLS TKHLYTHMTH 751 800 ENSTTRP00000013070/1-759 FLKQCFSLSE ENSP00000188790/1-760 FLKQCFSLSD ENSBTAP00000010702/1-760 FLKQCFSLSD bmy_06229T0/1-650 FLKQCFSLSE BACU010079/1-760 FLKQCFSSSE