KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:41:57 2014 Check: 00 .. Name: bmy_19927T0/1-287 Len: 416 Check: 9479 Weight: 1.00 Name: ENSP00000319192/1-414 Len: 416 Check: 5090 Weight: 1.00 Name: ENSTTRP00000008649/1-409 Len: 416 Check: 898 Weight: 1.00 Name: ENSBTAP00000010704/1-281 Len: 416 Check: 2883 Weight: 1.00 // 1 50 bmy_19927T0/1-287 ---------- ---------- ---------- ---------- ---------- ENSP00000319192/1-414 MIPLEKPGSG GSSPGATSGS GRAGRGLSGP CRPPPPPQAR GLLTEIRAVV ENSTTRP00000008649/1-409 MIPLERPSSG GSSPAAAPGS GRVGRGLTTP RRLPPPP--R GLLTEIRTAV ENSBTAP00000010704/1-281 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_19927T0/1-287 ---------- ---------- ---------- ---------- ---------- ENSP00000319192/1-414 RTEPFQDGYS LCPGRELGRG KFAVVRKCIK KDSGKEFAAK FMRKRRKGQD ENSTTRP00000008649/1-409 CTEPFQDAYS LSPGRALGRG KFAVVRKCIK KDSGKEFAAK FMRKRRKGQD ENSBTAP00000010704/1-281 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_19927T0/1-287 ------MSSA LLSLQAEFPT VL-------- ---------- -AGPEKTEVM ENSP00000319192/1-414 CRMEIIHEIA VLELAQDNPW VINLHEVYET ASEMILVLEY AAGGEIFDQC ENSTTRP00000008649/1-409 CRTEIIHEIA VLELAQDDPW VINLHAVYET PSEMILVLEY AAGGEIFDQC ENSBTAP00000010704/1-281 ---------- ---------- ---------- ---VLLLFSS AAGGEIFDQC 151 200 bmy_19927T0/1-287 ILSADPVYPS AKDEMSLFLL LH----VISH DGLWILPLLR PQNILLTSDS ENSP00000319192/1-414 VADREEAFKE KDVQRLMRQI LEGVHFLHTR DVVHL--DLK PQNILLTSES ENSTTRP00000008649/1-409 VADR-EAF-E KDVQRLMRQI LE-VRFLHAH DVVHL--DLK PQNILLTSDS ENSBTAP00000010704/1-281 VADRDEAFTE KDVQRLMRQI LEGVCFLHAH DVVHL--DLK PQNILLTSES 201 250 bmy_19927T0/1-287 PLGDIKIVDF GLSRVMKNSE ELREIMGTPE YVAPEILSYD PISMATDMWS ENSP00000319192/1-414 PLGDIKIVDF GLSRILKNSE ELREIMGTPE YVAPEILSYD PISMATDMWS ENSTTRP00000008649/1-409 PLGDIKIVDF GLSRVLKNGE ELREIMGTPE YVAPEILSYD PISMATDMWS ENSBTAP00000010704/1-281 PLGDIKIVDF GLSRIMKKSE ELREIMGTPE YVAPEVLSYD PISTATDMWS 251 300 bmy_19927T0/1-287 IGVLAYVMLT GVSPFLGDNK QETFLNISQM NLNYSEEEFD VVSESAVDFI ENSP00000319192/1-414 IGVLTYVMLT GISPFLGNDK QETFLNISQM NLSYSEEEFD VLSESAVDFI ENSTTRP00000008649/1-409 IGVLAYVMLT GVSPFLGDNK QETFLNISQM NLSYSEEEFD VVSESAVDFI ENSBTAP00000010704/1-281 IGVLAYVMLT GISPFLGDDK QETFLNISQM NLSYSEEEFD VVSESAVDFI 301 350 bmy_19927T0/1-287 KTLLVKKPED RATAEECLKH PWLMQSSVQE PSLKVKGALE EAQALQEGDS ENSP00000319192/1-414 RTLLVKKPED RATAEECLKH PWLTQSSIQE PSFRMEKALE EANALQEGHS ENSTTRP00000008649/1-409 KTLLVKKPED RATAEECLKH PWLTQSSVQE PSLKVKGALE EAQALQEGDP ENSBTAP00000010704/1-281 KTLLVKKPED RATAEECLKH PWLTQSGVQE PAFKVKGALE EAHALQEADP 351 400 bmy_19927T0/1-287 VPESSSDTQK PETEESVVTE ELIVVTSYTL GQCRQSEKEK MEQKAISKRF ENSP00000319192/1-414 VPEINSDTDK SETKESIVTE ELIVVTSYTL GQCRQSEKEK MEQKAISKRF ENSTTRP00000008649/1-409 VPESHSDTQK PETEESVVTE ELIVVTSYTL GQCRQSEKEK MEQKAISKRF ENSBTAP00000010704/1-281 VSESNSDTQK PETEESIVTE ELILVTSYTL GQCRQSEKEK MEQKAISKRF 401 450 bmy_19927T0/1-287 KFEEPLLQDI PGDFIY ENSP00000319192/1-414 KFEEPLLQEI PGEFIY ENSTTRP00000008649/1-409 KFEEPLLQDI PGDFIY ENSBTAP00000010704/1-281 KFEEPLLQDI PGDFIY