KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:41:58 2014 Check: 00 .. Name: ENSP00000259803/1-436 Len: 552 Check: 3631 Weight: 1.00 Name: bmy_03095T0/1-550 Len: 552 Check: 7137 Weight: 1.00 Name: ENSBTAP00000010709/1-433 Len: 552 Check: 8991 Weight: 1.00 Name: ENSTTRP00000014455/1-434 Len: 552 Check: 924 Weight: 1.00 // 1 50 ENSP00000259803/1-436 MEPDDFDSED KEILSWDIND VKLPQNVKKT DWFQEWPDSY AKHIYSSEDK bmy_03095T0/1-550 MELENIDSED KETLSWDIND MKLPQNVKKT DWFQEWPDAY EKHIYSSEDR ENSBTAP00000010709/1-433 MEPENADSAD KE-LSWDIND MKLPQNVKKT DWFQEWPDAY EKHIYSSDDR ENSTTRP00000014455/1-434 MELENVDSED KETLSWDIND MKLPQNVKKT DWFQEWPDAY EKHIYSSEDR 51 100 ENSP00000259803/1-436 NAQRHLSSWA MRNTNNHNSR ILKKSCLGVV VCGRDCLAEE GRKIYLRPAI bmy_03095T0/1-550 NAQRHVSSWA MRNTNNHNSR ILKKSCLGVV VCSRDCLVAE GRKVYLRPAI ENSBTAP00000010709/1-433 NAQRHLSSWA MRNTNNHNSR ILKKSCLGVV VCGRDCSVAE GRKVYLRPAI ENSTTRP00000014455/1-434 NAQRHMSSWA MRNTNNHNSR ILKKSCLGVV VCSRDCLVAE GRKVYLRPAI 101 150 ENSP00000259803/1-436 CDKARQKQQR ---------- ---------- ---------- ---------- bmy_03095T0/1-550 CDKARQKQRS EWGSCPEGPR RPRPSQGPIL RTGGWWRPRP VLQIILRRAS ENSBTAP00000010709/1-433 CDKARQKQQR ---------- ---------- ---------- ---------- ENSTTRP00000014455/1-434 CDKARQKQQR ---------- ---------- ---------- ---------- 151 200 ENSP00000259803/1-436 ---------- ---------- ---------- ---------- -----KRCPN bmy_03095T0/1-550 QLPGLRSSPL SCKISHSVRN CFLYHESEIG RAAQTQVTFL CFFVGKRCPN ENSBTAP00000010709/1-433 ---------- ---------- ---------- ---------- -----KRCPN ENSTTRP00000014455/1-434 ---------- ---------- ---------- ---------- -----KHCPN 201 250 ENSP00000259803/1-436 CDGPLKLIPC RGHGGFPVTN FWRHDGRFIF FQSKGEHDHP ---KPETKLE bmy_03095T0/1-550 CDGPLKLIPC RGHGGFPVTN FWRHDGRFIF FQVGFELEIP FLFNSGTLHR ENSBTAP00000010709/1-433 CDGPLKLIPC RGHGGFPVTN FWRHDGRFIF FQSKGEHDHP ---KPETKLE ENSTTRP00000014455/1-434 CDGPLKLVPC RGHGGFPVTN FWRHDGRFIF FQSKGEHDHP ---KPETKLE 251 300 ENSP00000259803/1-436 AEARRAMKKV NTAPSSVSLS LKGSTETR-S LPGETQSQGS LPLTWSFQEG bmy_03095T0/1-550 APAGVSSRKC TGGGEPAPSL GDPLDELTPP LPGETQSWES --LTWSFQEG ENSBTAP00000010709/1-433 AEARRAVKKT HSASSSVSSK LKQSPEIK-P LPGETQSWEN --LTWSFQEA ENSTTRP00000014455/1-434 AEARRAMKKA HSASSSVSSK MKQGPQIK-P LPGETQSWES --LTWSFQEG 301 350 ENSP00000259803/1-436 VQLPGSYSGH LIANTPQQNS LNDCFSFSKS YGLGGITDLT DQTSTVDPMK bmy_03095T0/1-550 VQSPSSYSGH LIGNAPQQKA LNDGSSFSES YGLGRTSDPR DPTPTLGPTQ ENSBTAP00000010709/1-433 VQLPPGYSGH VIGYTPQQKA WNDGSSFTES YGLGGTSELA NLTPTLGPPQ ENSTTRP00000014455/1-434 VQLPGSYSGH LIGNAPQPKA LNDGSSFSES YGLGRTSDPR DPTPTLGPTQ 351 400 ENSP00000259803/1-436 LYEKRKLSSS RTYSSGDLLP PSASGVYSDH GDLQAWSKNA ALGRNHLADN bmy_03095T0/1-550 LYEKCDLSNS RVSSSQDLLQ PPVSGVFSDY SDLQTWNKNV ALGRNPSKDN ENSBTAP00000010709/1-433 LYDKWDLSHS RVSSSGDLLQ PSISGVFSDY SDLQTWNKNV ALGRSPLNDN ENSTTRP00000014455/1-434 LYEKCNLSNS RVSSSQDLLQ PPVSGVFSDY SDLQTWNKNV ALGRNPSNDN 401 450 ENSP00000259803/1-436 CYSNYPFPLT SWPCSFSPSQ NSSEPFYQQL PLEPPAAKTG CPPLWPNPAG bmy_03095T0/1-550 SCPSYPFPLT SWPYDFSPSQ SSSEPFLQQI PMEPPAAKTS CHPFWPNQGG ENSBTAP00000010709/1-433 SCPSYPFPLT SWPYDFSPSQ SSSEPFHQPV PVEPPAVKSS YPPIWPNQGG ENSTTRP00000014455/1-434 SCPSYPFPLT SWPYDFSPSQ SSSEPFLQQI PMEPPAPKTS CHPFWPNQGG 451 500 ENSP00000259803/1-436 NLYEEKVHVD FNSYVQSPAY HSPQEDPFLF TYASHPHQQY SLPSKSSKWD bmy_03095T0/1-550 ELYEEKVHVD FNSYHPSTTC HSPQEDPFLL TYTSQPHHQY SLPGKSSKWD ENSBTAP00000010709/1-433 ELYEEKVPVD FNSYHPPTTC HSPQEDPLLL THTSQPYHQY ALPGKSNKWD ENSTTRP00000014455/1-434 ELYEEKVHVD FNSYHPSTTC HSPQEDPFLL TYTSQPHHQY SLPGKSSKWD 501 550 ENSP00000259803/1-436 FEEEMTYLGL DHCNN----- ----DMLLNL CPLR------ ---------- bmy_03095T0/1-550 FDEEMSIWGS QHLNCIICCI FNVLGIILNR ADMKGPGPHL CLLGNRMKEW ENSBTAP00000010709/1-433 FDEEMGCLGL DHCNN----- ----EMLLNL CPLR------ ---------- ENSTTRP00000014455/1-434 FDEEMRYMGL DHCNN----- ----EMLLNL CPLR------ ---------- 551 600 ENSP00000259803/1-436 -- bmy_03095T0/1-550 RE ENSBTAP00000010709/1-433 -- ENSTTRP00000014455/1-434 --