KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:41:59 2014 Check: 00 .. Name: ENSP00000351664/1-1067 Len: 1218 Check: 9324 Weight: 1.00 Name: ENSBTAP00000010714/1-1070 Len: 1218 Check: 8881 Weight: 1.00 Name: bmy_05570T0/1-1164 Len: 1218 Check: 5693 Weight: 1.00 Name: BACU014205/1-1077 Len: 1218 Check: 199 Weight: 1.00 Name: ENSTTRP00000003939/1-1066 Len: 1218 Check: 992 Weight: 1.00 // 1 50 ENSP00000351664/1-1067 ---------- -MASPTSTN- ---------- ---------- ---------- ENSBTAP00000010714/1-1070 ---------- -MASTISTN- ---------- ---------- ---------- bmy_05570T0/1-1164 MWLEALLNSA WPIRPVSLHL RPAQPLSKLY GLECEYPRPP LPVVQLPLHP BACU014205/1-1077 MWLEALLNSA WPVRPVSLHL RPAQPLSKLY GL-------- ---------- ENSTTRP00000003939/1-1066 ---------- -MASPTSIN- ---------- ---------- ---------- 51 100 ENSP00000351664/1-1067 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010714/1-1070 ---------- ---------- ---------- ---------- ---------- bmy_05570T0/1-1164 SRPVHPSHII CPGVYRLGRP SPHFAEVFLL PTPPRETFAL LDVPSAPVRV BACU014205/1-1077 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003939/1-1066 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000351664/1-1067 ---------- ---------- ---------- ---------- ---PAHAHFE ENSBTAP00000010714/1-1070 ---------- ---------- ---------- ---------- ---PAHAHFE bmy_05570T0/1-1164 TCGGDFHLLL RPGRWARSGT AATCPCPSLG APEVSMASPT STNPAHAHFE BACU014205/1-1077 ---------- ---------- ---------- ---------- ---ESHAHFE ENSTTRP00000003939/1-1066 ---------- ---------- ---------- ---------- ---PAHAHFE 151 200 ENSP00000351664/1-1067 SFLQAQLCQD VLSSFQELCG ALGLEPGGGL PQYHKIKDQL NYWSAKSLWT ENSBTAP00000010714/1-1070 SFLQAQLCQD VLSSFQGLCG ALGVEPGGGL SQYHKVKAQL NYWNAKSLWA bmy_05570T0/1-1164 SVLQAQLCQD VLSSFQGLCR ALGLEPGGGL PQYHKIKAQL NYWSAKSLWA BACU014205/1-1077 SVLQAQLCQD VLSSFQGLCR ALGLEPGGGL PQYHKIKAQL NYWSAKSLWA ENSTTRP00000003939/1-1066 SVLQAQLCQD VLSSFQGLCR ALGLEPGGGL PQYHKIKAQL NYWSAKSLWA 201 250 ENSP00000351664/1-1067 KLDKRAGQPV YQQGRACTST KCLVVGAGPC GLRVAVELAL LGARVVLVEK ENSBTAP00000010714/1-1070 KLDKRASQPV YQQGRACTGT KCLVVGAGPC GLRAAVELAM LGARVVLVEK bmy_05570T0/1-1164 KLDKRASQPV YQQGQACTST KCLVVGAGPC GLRAAVELAM LGARVVLVEK BACU014205/1-1077 KLDKRASQPV YQQGQACTST KCLVVGAGPC GLRAAVELAM LGARVVLVEK ENSTTRP00000003939/1-1066 KLDKRASQPV YQQGRACTGT KCLVVGAGPC GLRAAVELAM LGARVVLVEK 251 300 ENSP00000351664/1-1067 RTKFSRHNVL HLWPFTIHDL RALGAKKFYG RFCTGTLDHI SIRQLQLLLL ENSBTAP00000010714/1-1070 RTKFSRHNVL HLWPFTIHDL RALGAKKFYG RFCTGSLDHI SIRQLQLLLL bmy_05570T0/1-1164 RTKFSRHNVL HLWPFTIHDL RALGAKKFYG RFCTGSLDHI NFH------- BACU014205/1-1077 RTKFSRHNVL HLWPFTIHDL RALGAKKFYG RFCTGSLDHI SIRQLQLLLL ENSTTRP00000003939/1-1066 RTKFSRHNVL HLWPFTIHDL RALGAKKFYG RFCTGSLDHI SIRQLQLLLL 301 350 ENSP00000351664/1-1067 KVALLLGVEI HWGVTFTGLQ PPPRKGSGWR AQLQPNPPAQ LANYEFDVLI ENSBTAP00000010714/1-1070 KVALLLGVEI HWGITFTGLQ PPPKKGSGWR AQLQPSPPAQ LAKYEFDVLI bmy_05570T0/1-1164 ---------- ----TFVPLT PSAP-GSGWR AQLQPSPPAQ LANYEFDVLI BACU014205/1-1077 KVALLLGVEI HWGVTFTGLQ PPPRKGSGWR AQLQPSPPAQ LANYEFDVLI ENSTTRP00000003939/1-1066 KVALLLGVEI HWGVTFTGLQ PPPRKGSGWR AQLQPSPPAQ LANYEFDVLI 351 400 ENSP00000351664/1-1067 SAAGGKFVPE GFKVREMRGK LAIGITANFV NGRTVEETQV PEISGVARIY ENSBTAP00000010714/1-1070 SAAGGKFVPE GFTVREMRGK LAIGITANFV NGRTVEETQV PEISGVARIY bmy_05570T0/1-1164 SAAGGKFVPE GFTVREMRGK LAIGITANFV NRXTXEETQV PEISGVARIY BACU014205/1-1077 SAAGGKFVPE GFTVREMRGK LAIGITANFV NRRTVEETQV PEISGVARIY ENSTTRP00000003939/1-1066 SAAGGKFVPE GFTVREMRGK LAIGITANFV NGRTVEETQV PEISGVARIY 401 450 ENSP00000351664/1-1067 NQSFFQSLLK ATGIDLENIV YYKDDTHYFV MTAKKQCLLR LGVLRQDWPD ENSBTAP00000010714/1-1070 NQSFFQSLLK ATGIDLENIV YYKDDTHYFV MTAKKQCLLR LGVLHKDWPD bmy_05570T0/1-1164 NQSFFQSLLK ATGIDLENIV YYKDDTHYFV MTAKKQCLLR LGVLRQDWPE BACU014205/1-1077 NQSFFQSLLK ATGIDLENIV YYKDDTHYFV MTAKKQCLLR LGVLRQDWPE ENSTTRP00000003939/1-1066 NQSFFQSLLK ATGIDLENIV YYKDDTHYFV MTAKKQCLLR LGVLRQDWPE 451 500 ENSP00000351664/1-1067 TNRLLGSANV VPEALQRFTR AAADFATHGK LGKLEFAQDA HGQPDVSAFD ENSBTAP00000010714/1-1070 TERLLGSANV VPEALQRFAR AAADFATHGK LGKLEFARDA HGRPDVSAFD bmy_05570T0/1-1164 TDRLLGSANV VPEALQRFAR AAADFATHGK LGKLEFAQDA HGRPDVSAFD BACU014205/1-1077 TDRLLGSANV VPEALQRFAR AAADFATHGK LGKLEFAQDA HGRPDVSAFD ENSTTRP00000003939/1-1066 TDRLLGSANV APEALQRFAR AAANFATHGK LGKLEFAQDA HGRPDVSAFD 501 550 ENSP00000351664/1-1067 FTSMMRAESS ARVQEKHGAR LLLGLVGDCL VEPFWPLGTG VARGFLAAFD ENSBTAP00000010714/1-1070 FTSMMRAESS ARVQERHGTR LLLGLVGDCL VEPFWPLGTG VARGFLAAFD bmy_05570T0/1-1164 FTSMMRAESS ARVQEKHGAR LLLGLVGDCL VEPFWPLGTG VARGFLAAFD BACU014205/1-1077 FTSMMRAESS ARVQEKHGAR LLLGLVGDCL VEPFWPLGTG VARGFLAAFD ENSTTRP00000003939/1-1066 FTSMMRAESS ARVQEKHGAR LLLGLVGDCL VEPFWPLGTG VARGFLAAFD 551 600 ENSP00000351664/1-1067 AAWMVKRWAE GAESLEVLAE RESLYQLLSQ TSPENMHRNV AQYGLDPATR ENSBTAP00000010714/1-1070 AAWMVKRWAE GAGPLEVLAE RESLYQLLSQ TSPENMHRNV AQYGLDPATR bmy_05570T0/1-1164 AAWMVKRWAE GAGPLEVLAE RESLYQLLSQ TSPENMHRNV AQYGLDPASR BACU014205/1-1077 AAWMVKRWAE GARPLEVLAE RESLYQLLSQ TSPENMHRNV AQYGLDPASR ENSTTRP00000003939/1-1066 AAWMVKRWAE GAGPLEVLAE RESLYQLLSQ TSPENMHRNV AQYGLDPASR 601 650 ENSP00000351664/1-1067 YPNLNLRAVT PNQVRDLYDV LAKEPVQRNN DKTD------ ------TGMP ENSBTAP00000010714/1-1070 YPNLNLRAVT PSQVRDLYDM EAKEPVQRMS DETD------ ------SGKA bmy_05570T0/1-1164 YPNLNLRAVT PSQVRTPGTA RQDFPGQLPH PRAGLPSCGL PSPCPVAQLP BACU014205/1-1077 YPNLNLRAVT PSQVRDLYDV EAKEPVRRMS DKTD------ ------SGKP ENSTTRP00000003939/1-1066 YPNLNLRAVT PSQVRDLYDV EAKEPVQRMS DKTD------ ------SRKP 651 700 ENSP00000351664/1-1067 ATGSAGTQEE LLRWCQEQTA GYPGVHVSDL SSSWADGLAL CALVYRLQPG ENSBTAP00000010714/1-1070 ATGAVGSQEE LLRWCQEQTA GYPGVHVTDL SSSWADGLAL CALVHRLRPA bmy_05570T0/1-1164 LPGSVATQEE LLHWCQEQTA GYPGVHVTNL SSSWADGLAL CALVHRLRPG BACU014205/1-1077 ATGSVATQEE LLHWCQEQTA GYPGVHVTNL SSSWVDGLAL CALVHRLRPG ENSTTRP00000003939/1-1066 ATGSVATQEE LLHWCQEQTA GYPGVHVTDL SSSWADGLAL CALVHRLRPG 701 750 ENSP00000351664/1-1067 LLEPSELQGL GALEATAWAL KVAENELGIT PVVSAQAVVA GSDPLGLIAY ENSBTAP00000010714/1-1070 LLEPSELQGM GALEATSWAL KMAEHELGIT PVLSAQAMVA GSDPLGLIAY bmy_05570T0/1-1164 LLEPSELQGV GALEATSWAL KMAEHELGIT PVLSAQAMVA GNDPLGLIAY BACU014205/1-1077 LLEPSELQGV GALEATSWAL KMAEHELGIT PVLSAQAMVA GNDPLGLIAY ENSTTRP00000003939/1-1066 LLEPSELQGV GALEATSWAL KMAEHELGIT PVLSAQAMVA GNDPLGLIAY 751 800 ENSP00000351664/1-1067 LSHFHSAFKS MAHSP-GPVS QASPGTSSAV LFLSKLQRTL QRSRAKENAE ENSBTAP00000010714/1-1070 LSHFHSAFKS VPHNP-GSVS QGSPGTASAV LFLGKLQRTL QRTRTQENGE bmy_05570T0/1-1164 LSHFHSAFKS TPHNPAGPVS QGSSGTASAV LFLGKLQRTL QRTRAQGNGE BACU014205/1-1077 LSHFHSAFKS TPHNP-GPVS QGSSGTASAV LFLGKLQRTL QRT------- ENSTTRP00000003939/1-1066 LSHFHSAFKS TPHNP-GPVS QGSPGTASAV LFLGKLQRTL QRTRAQGNGE 801 850 ENSP00000351664/1-1067 DAGGKKLRLE MEAETPSTEV PPDPEPGVPL TPPSQHQEAG AGDLCALCGE ENSBTAP00000010714/1-1070 DAGGKKPRLE VKAETPSTEE PPVPKPDEPM TPPSQQQDAS AEDLCALCGQ bmy_05570T0/1-1164 DAGGKKPRV- ---------- ---------- -------EAS AEDLCALCGE BACU014205/1-1077 -------RVQ VEAETPSTEE PPVPEPDVPV TPASQYQEAS AEDLCALCGE ENSTTRP00000003939/1-1066 DAGGKKPRVE VEAETPSTEE PPVPEPDVPV TPPSQYQEAS AEDLCALCGE 851 900 ENSP00000351664/1-1067 HLYVLERLCV NGHFFHRSCF RCHTCEATLW PGGYEQHPGD GHFYCLQHLP ENSBTAP00000010714/1-1070 HLYILERLCA DGRFFHRSCF RCHICEATLW PGGYRQHPGD GYLYCLQHLP bmy_05570T0/1-1164 HLYILERLCA NGRFFHRSCF RCHICEATLW PSGYGQHPGD EHFYCLQHLP BACU014205/1-1077 HLYILERLCA NGRFFHRSCF RCHICETTLW PSGYGQHPGD GHFYCLQHLP ENSTTRP00000003939/1-1066 HLYILERLCA NGRFFHRSCF RCHICEATLW PSGYGQHPGD GHFYCLQHLP 901 950 ENSP00000351664/1-1067 QTDHKAEGSD RGPESPELPT PSENSMPPGL STPTASQEGA GPVPDPSQPT ENSBTAP00000010714/1-1070 QTGHEEDSSD RGPESQDLPM SSENNTPSGP ATPVDLHQGT SPVPNPIQPT bmy_05570T0/1-1164 QPGHKEDSSD RGPESQDLPI HSENNMPSRP SIPVAPQEGT SPVPS--QPT BACU014205/1-1077 QPGHKEDSSD RGPESQVLPI HSENNMPSRP SIPVAPQEGT SPVPS--QPT ENSTTRP00000003939/1-1066 QPGHKEDSSD RGPESQDLPT HSENNMPSRP SIPGAPQEGT TPVPS--QPT 951 1000 ENSP00000351664/1-1067 RRQIRLSSPE RQRLSSLNLT PDPEMEPPPK PPRSCSALAR HALESSFVGW ENSBTAP00000010714/1-1070 RRLIRLSSPE RQRLSSLHLT PDPEMEPPPK PPRSCSTLAH QALEASFKGW bmy_05570T0/1-1164 RRLIRLSSPE RQRLSSLHLT PDPEMEAPPK PPRSCSVLAR QALEGSFVGW BACU014205/1-1077 RRLIRLSSPE RQRLSSLHLT PDPEMEAPPK PPRSCSILAR QALEGSFVGW ENSTTRP00000003939/1-1066 RQLIRLSSPE RQRLSSLHLT PDPEMEAPPK PPRSCSVLAR QALEGSFVGW 1001 1050 ENSP00000351664/1-1067 GLPVQSPQAL VAMEK-EEKE SPFSSE--EE EEDVPLDSDV EQALQTFAKT ENSBTAP00000010714/1-1070 GMPVQSPQVL EAMEMGEEER SSSSEEETEE EEDVPLDSDM EHFLRNLAEN bmy_05570T0/1-1164 GMPVQSPQVL VAVEE-EEEE SPCSSDE-EV EEDVPLDSDT EQVLWNLAKN BACU014205/1-1077 GMPVQSPQVL VAVEKEEEEE SPCSSDE-EA EEDVPLDSDT EQVLWNLAKN ENSTTRP00000003939/1-1066 GMPVQSPQVL VAVEK-EEEE SPCSSDE-EA EEDVPLDSDT EQVLWNLAKN 1051 1100 ENSP00000351664/1-1067 SGTMNNYPTW RRTLLRRAKE EEMKRFCKAQ TIQRRLNEIE AALRELEAEG ENSBTAP00000010714/1-1070 SGTMNNYPTW RRTLLRRAKE EEMKRFCKAQ AIQRRLNEIE AALRELEARG bmy_05570T0/1-1164 SGTMNSYPTW RRTLLRRAKE EEMKRFCKAQ AIQRRQNEIE AALRELEAEG BACU014205/1-1077 SGTMNSYPTW RRTLLRRAKE EEMKRFCKAQ AIQRRQNEIE AALRELEAKG ENSTTRP00000003939/1-1066 SGTMNSYPTW RRTLLRRAKE EEMKRFCKAQ AIQRRQNEIE AALRELEAKG 1101 1150 ENSP00000351664/1-1067 VKLELALRRQ SSSPEQQKKL WVGQLLQLVD KKNSLVAEEA ELMITVQELN ENSBTAP00000010714/1-1070 TELELALRSQ SSSPEKQKAL WVEQLLQLVQ KKNSLVAEEA ELMITVQELN bmy_05570T0/1-1164 TELELALRSR GSSPEQQKAL WLEQLLQLVQ KKNSLVAEEA ELMITVQELN BACU014205/1-1077 MELELALRSR GSSPEQQKAL WLEQLLQLVQ KKNSLVAEEA ELMITVQELN ENSTTRP00000003939/1-1066 MELELALRSR SSSPEQQKAL WLEQLLQLVQ KKNSLVAEEA ELMITVQELN 1151 1200 ENSP00000351664/1-1067 LEEKQWQLDQ ELRGYMNREE NLKTAADRQA EDQVLRKLVD LVNQRDALIR ENSBTAP00000010714/1-1070 LEEKQWQLDQ ELRTYMNREE TLKTAADRQA EDQVLRKLLD VVNQRDALIR bmy_05570T0/1-1164 LEEKQWQLDQ ELRTYMNREE TLKTAADQQA EDEVLRKLVD VVNQRDALIR BACU014205/1-1077 LEEKQWQLDQ ELRTYMNQEE ALKTAADQQA EDKVLRKLVD VVNQRDALIR ENSTTRP00000003939/1-1066 LEEKQWQLDQ ELRTYMNREE TLKTAADRQA EDQVLRKLVD VVNQRDALIR 1201 1250 ENSP00000351664/1-1067 FQEERRLSEL ALGTGAQG ENSBTAP00000010714/1-1070 LQEERRLSEL ASEPGVQG bmy_05570T0/1-1164 FQEERRLSEL PSGPGPQG BACU014205/1-1077 FQEERRLSEL PSGPGPQG ENSTTRP00000003939/1-1066 FQEERRLSEL ASGPGPQG