KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:00 2014 Check: 00 .. Name: ENSP00000354927/1-657 Len: 682 Check: 4269 Weight: 1.00 Name: ENSBTAP00000010716/1-626 Len: 682 Check: 3914 Weight: 1.00 Name: bmy_17564T0/1-672 Len: 682 Check: 382 Weight: 1.00 Name: ENSTTRP00000001576/1-657 Len: 682 Check: 5765 Weight: 1.00 Name: BACU006133/1-647 Len: 682 Check: 3368 Weight: 1.00 // 1 50 ENSP00000354927/1-657 MDEQEALNSI MNDLVALQMN RRHRMPGYET MKNKDTGHSN RQKKHNSSSS ENSBTAP00000010716/1-626 ADEQEALNSI MKDLVALQMS RRPRVPGYET MKSKDTGHPN RQ-------- bmy_17564T0/1-672 ---------- MKDLVALQMS RRPRVPGYET MKNKETGHPN RQKKHNSSSS ENSTTRP00000001576/1-657 MDEQEALNSI MKDLVALQMS RRPRVPGYET MKNKETGHPN RQKKHNSSSS BACU006133/1-647 ---------- MKDLVALQMS RRPRVPGYET MKNKETGHPN RQKKHNSSSS 51 100 ENSP00000354927/1-657 ALLNSPTVTT SSCAGASEKK KFLSDVRIKF EHNGERRIIA FSRPVKYEDV ENSBTAP00000010716/1-626 ---------- ---------- ---SDVRIKF EHNGERRIIA FSRPVRYEDV bmy_17564T0/1-672 ALLNSPTVTT SSCAGASEKK KFLSDVRIKF EHNGERRIIA FSRPVRYEDV ENSTTRP00000001576/1-657 ALLNSPTVTT SSCAGASEKK KFLSDVRIKF EHNGERRIIA FSRPVRYEDV BACU006133/1-647 ALLNSPTVTT SSCAGASEKK KFLSDVRIKF EHNGERRIIA FSRPVRYEDV 101 150 ENSP00000354927/1-657 EHKVTTVFGQ PLDLHYMNNE LSILLKNQDD LDKAIDILDR SSSMKSLRIL ENSBTAP00000010716/1-626 EHKVTAVFGQ PLDLHYMNNE LSILLKNQDD LDKAIDILDR SSSMKSLRIL bmy_17564T0/1-672 EHKVTTVFGQ PLELHYMNNE LSILLKNQDD LDKAIDILDR SSSMKSLRIL ENSTTRP00000001576/1-657 EHKVTTVFGQ PLDLHYMNNE LSILLKNQDD LDKAIDILDR SSSMKSLRIL BACU006133/1-647 EHKVTTVFGQ PLDLHYMNNE LSILLKNQDD LDKAIDILDR SSSMKSLRIL 151 200 ENSP00000354927/1-657 LLSQDRNHNS SSPHSGVSRQ VRIKASQSAG DINTIYQPPE PRSRHLSVSS ENSBTAP00000010716/1-626 LLSQDRNHTS SSPHSGVSRQ VRIKASQSAG DINTIYQPPE SRSRHLSVSS bmy_17564T0/1-672 LLSQDRNHTS SPPHSGVSRQ VRIKASQSAG DINTIYQPPE PRSRHLSVSS ENSTTRP00000001576/1-657 LLSQDRNHTS SPPHSGVSRQ VRIKASQSAG DINTIYQPPE PRSRHLSVSS BACU006133/1-647 LLSHDRNHTS SPPHSGVSRQ VRIKASQSAG DINTIYQPPE PRSRHLSVSS 201 250 ENSP00000354927/1-657 QNPGRSSPPP GYVPERQQHI ARQGSYTSIN SEGEFIPETS EQCMLDPLSS ENSBTAP00000010716/1-626 QNPGRSSPPP GYVPERQQRI ARQGSYTSIN SEGEFIPETS EQCMLDPLSS bmy_17564T0/1-672 QNPGRSSPPP GYVPERQQRI ARQGSYTSIN SEGEFIPETS EQCMLDPLSS ENSTTRP00000001576/1-657 QNPGRSSPPP GYVPERQQRI ARQGSYTSIN SEGEFIPETS EQCMLDPLSS BACU006133/1-647 QNPGRSSPPP GYVPERQQRI ARQGSYTSIN SEGEFIPETS EQCMLDPLSS 251 300 ENSP00000354927/1-657 AENSLSGSCQ SLDRSADSPS FRKSRMSRAQ SFPDNRQEYS DRETQLYDKG ENSBTAP00000010716/1-626 AENSLSGSCQ SLDRSADSPS FRKSRMSRAQ SFPDNRQEFS DRETPLYDKG bmy_17564T0/1-672 AENSLSGSCQ SLDRSADSPS FRKSRMSRAQ SFPDNRQEFS DRETQLYDKG ENSTTRP00000001576/1-657 AENSLSGSCQ SLDRSADSPS FRKSRMSRAQ SFPDNRQEFS DRETQLYDKG BACU006133/1-647 AENSLSGSCQ SLDRSADSPS FRKSRMSRAQ SFPDNRQEFS DRETQLYDKG 301 350 ENSP00000354927/1-657 VKGGTYPRRY HVSVHHKDYS DGRRTFPRIR RHQGNLFTLV PSSRSLSTNG ENSBTAP00000010716/1-626 VKGGTYPRRY HVSVHHKDYN DGRRTFPRIR RHQGNLFTLV PSSRSLSTNG bmy_17564T0/1-672 VKGGTYPRRY HVSVHHKDYN DGRRTFPRIR RHQGNLFTLV PSSRSLSTNG ENSTTRP00000001576/1-657 VKGGTYPRRY HVSVHHKDYN DGRRTFPRIR RHQGNLFTLV PSSRSLSTNG BACU006133/1-647 VKGGTYPRRY HVSVHHKDYN DGRRTFPRIR RHQGNLFTLV PSSRSLSTNG 351 400 ENSP00000354927/1-657 ENMGLAVQYL DPRGRLRSAD SENALSVQER NVPTKS---- ---------- ENSBTAP00000010716/1-626 ENLGLAVQYL DPRARLRSAD SENALSVQER SVPTKS---- ---------- bmy_17564T0/1-672 ENMGLAVQYL DPRGRLRSAD SENALSVQER NVPTKCLIDQ GTEPVPDGLG ENSTTRP00000001576/1-657 ENMGLAVQYL DPRGRLRSAD SENALSVQER NVPTKS---- ---------- BACU006133/1-647 ENMGLAVQYL DPRGRLRSAD SENALSVQER NVPTKS---- ---------- 401 450 ENSP00000354927/1-657 ---------- -PSAPINWRR GKLLGQGAFG RVYLCYDVDT GRELASKQVQ ENSBTAP00000010716/1-626 ---------- -PSAPINWRR GKLLGQGAFG RVYLCYDVDT GRELASKQVQ bmy_17564T0/1-672 DAMLRDVMMP APSAPINWRR GKLLGQGAFG RVYLCYDVDT GRELASKQVQ ENSTTRP00000001576/1-657 ---------- -PSAPINWRR GKLLGQGAFG RVYLCYDVDT GRELASKQVQ BACU006133/1-647 ---------- -PSAPINWRR GKLLGQGAFG RVYLCYDVDT GRELASKQVQ 451 500 ENSP00000354927/1-657 FDPDSPETSK EVSALECEIQ LLKNLQHERI VQYYGCLRDR AEKTLTIFME ENSBTAP00000010716/1-626 FDPDSPETSK EVSALECEIQ LLKNLQHERI VQYYGCLRDR AEKTLTIFME bmy_17564T0/1-672 FDPDSPETSK EVSALECEIQ LLKNLQHERI VQYYGCLRDR AEKTLTIFME ENSTTRP00000001576/1-657 FDPDSPETSK EVSALECEIQ LLKNLQHERI VQYYGCLRDR AEKTLTIFME BACU006133/1-647 FDPDSPETSK EVSALECEIQ LLKNLQHERI VQYYGCLRDR AEKTLTIFME 501 550 ENSP00000354927/1-657 YMPGGSVKDQ LKAYGALTES VTRKYTRQIL EGMSYLHSNM IVHRDIKGAN ENSBTAP00000010716/1-626 YMPGGSVKDQ LKAYGALTES VTRKYTRQIL EGMSYLHSNM IVHRDIKGAN bmy_17564T0/1-672 YMPGGSVKDQ LKAYGALTES VTRKYTRQIL EGMSYLHSNM IVHRDIKGAN ENSTTRP00000001576/1-657 YMPGGSVKDQ LKAYGALTES VTRKYTRQIL EGMSYLHSNM IVHRDIKGAN BACU006133/1-647 YMPGGSVKDQ LKAYGALTES VTRKYTRQIL EGMSYLHSNM IVHRDIKGAN 551 600 ENSP00000354927/1-657 ILRDSAGNVK LGDFGASKRL QTICMSGTGM RSVTGTPYWM SPEVISGEGY ENSBTAP00000010716/1-626 ILRDSAGNVK LGDFGASKRL QTICMSGTGM RSVTGTPYWM SPEVISGEGY bmy_17564T0/1-672 ILRDSAGNVK LGDFGASKRL QTICMSGTGM RSVTGTPYWM SPEVISGEGY ENSTTRP00000001576/1-657 ILRDSAGNVK LGDFGASKRL QTICMSGTGM RSVTGTPYWM SPEVISGEGY BACU006133/1-647 ILRDSAGNVK LGDFGASKRL QTICMSGTGM RSVTGTPYWM SPEVISGEGY 601 650 ENSP00000354927/1-657 GRKADVWSLG CTVVEMLTEK PPWAEYEAMA AIFKIATQPT NPQLPSHISE ENSBTAP00000010716/1-626 GRKADVWSLG CTVVEMLTEK PPWAEYEAMA AIFKIATQPT NPQLPSHISE bmy_17564T0/1-672 GRKADVWSLG CTVVEMLTEK PPWAEYEAMA AIFKIATQPT NPQLPSHISE ENSTTRP00000001576/1-657 GRKADVWSLG CTVVEMLTEK PPWAEYEAMA AIFKIATQPT NPQLPSHISE BACU006133/1-647 GRKADVWSLG CTVVEMLTEK PPWAEYEAMA AIFKIATQPT NPQLPSHISE 651 700 ENSP00000354927/1-657 HGRDFLRRIF VEARQRPSAE ELLTHHFAQL MY ENSBTAP00000010716/1-626 HGRDFLRRIF VEARQRPSAE ELLTHHFAQL VY bmy_17564T0/1-672 HGRDFLRRIF VEARQRPSAE ELLTHHFAQL VY ENSTTRP00000001576/1-657 HGRDFLRRIF VEARQRPSAE ELLTHQFAQL VY BACU006133/1-647 HGRDFLRRIF VEARQRPSAE ELLTHHFAQL VY