KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:02 2014 Check: 00 .. Name: bmy_02153T0/1-257 Len: 277 Check: 3558 Weight: 1.00 Name: ENSP00000237275/1-222 Len: 277 Check: 7942 Weight: 1.00 Name: ENSBTAP00000010726/1-219 Len: 277 Check: 5374 Weight: 1.00 Name: ENSTTRP00000008334/1-103 Len: 277 Check: 2068 Weight: 1.00 Name: BACU003660/1-199 Len: 277 Check: 738 Weight: 1.00 // 1 50 bmy_02153T0/1-257 ---------- GNQELFPCEV CGRRFAADVL ERHGPICRKL FNKKRKAFNS ENSP00000237275/1-222 MAGAEPFLAD GNQELFPCEV CGRRFAADVL ERHGPICKKL FNRKRKPFSS ENSBTAP00000010726/1-219 MAGAQPFLAD GNQELFPCEV CGRRFAADVL ERHGPICRKL FNKKRKPFNS ENSTTRP00000008334/1-103 ---------- ---------- ---------- ---------- ---------- BACU003660/1-199 ---ALGSYTD GNQELFPCEV CGRRFAADVL ERHGPICRKL FNKKRKAFNS 51 100 bmy_02153T0/1-257 LKQRLQGTDI PTVWKAPQSK PQPMRKSNWR QQHEDFINVI RSAKQCTLAI ENSP00000237275/1-222 LKQRLQGTDI PTVKKTPQSK SPPVRKSNWR QQHEDFINAI RSAKQCMLAI ENSBTAP00000010726/1-219 LKQRLRGTDI PTVGKAPQSK PQPVRKSNWR QHHEDFINAI QSAKQCTLAI ENSTTRP00000008334/1-103 ---------- ---------- ---------- ---------- ---------- BACU003660/1-199 LKQRLQGTDI PTVWKAPQSK PQPMRKSNWR QQHEDFINAT RSAKQCTLAI 101 150 bmy_02153T0/1-257 KEGRPLPAPP PPSINLDYIQ HPYYLMKPQP IGTLISARIN LLAES----L ENSP00000237275/1-222 KEGRPLPPPP PPSLNPDYIQ RPYCMRRFNE --SAAERHTN FCKDQSSRRV ENSBTAP00000010726/1-219 KEGRPLPPPP PPTVNPDYIQ CPYCKRRFNE --TAASRHIN FCKDQESRRV ENSTTRP00000008334/1-103 ---------- -------YIR CPYCMRRFNE --TAATQHIN FCKDQSSRRV BACU003660/1-199 KEGRPLPPPP PPSINLDYIQ CPYCMRRFNE --TAASRHIN FCKDQSSRRV 151 200 bmy_02153T0/1-257 IQPRQQP--- --NWHPGVQM SPEKGTTVTS AVGALLQNRA LEAS-VVPTR ENSP00000237275/1-222 FNPAQTAAKL ASRAQGRAQM GPKKEPTVTS AVGALLQNRV LVATNEVPTK ENSBTAP00000010726/1-219 FDPAQTAARL ASRAQGRAQM SPKKELTVTS AVGALLQNRA LEAS-AAPTR ENSTTRP00000008334/1-103 FYPAQTAAKL ATRSQGRVQM SPKGGTTVTS AVGALLQNRA LEAS-VVPTR BACU003660/1-199 FDPAQAAAKL ASRVQGRVQM SPEKGTTVTS AVGALLQNRA LEAS-VVPTR 201 250 bmy_02153T0/1-257 PVGYKSPKGI KRSTLLRRLY GGGDSLRERK LHRGLAVDPA SGAKFRQGFT ENSP00000237275/1-222 S--------- ---------- ---------- ---GLAMDPA SGAKLRQGFS ENSBTAP00000010726/1-219 P--------- ---------- ---------- -----AVDPA SGAKLRQGFA ENSTTRP00000008334/1-103 P--------- ---------- ---------- ---GLAADPA SGAKLRQGFT BACU003660/1-199 P--------- ---------- ---------- ---G------ ---------- 251 300 bmy_02153T0/1-257 KSSKKRLTPR GQVNQVCVPE LTEDSCN ENSP00000237275/1-222 KSSKKD---- ---------- ------- ENSBTAP00000010726/1-219 KSSKKD---- ---------- ------- ENSTTRP00000008334/1-103 K-PKKD---- ---------- ------- BACU003660/1-199 ---ELE---- ---------- -------