KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:02 2014 Check: 00 .. Name: ENSP00000466690/1-335 Len: 413 Check: 3317 Weight: 1.00 Name: ENSBTAP00000010727/1-338 Len: 413 Check: 2256 Weight: 1.00 Name: bmy_06130T0/1-390 Len: 413 Check: 6920 Weight: 1.00 Name: ENSTTRP00000013317/1-335 Len: 413 Check: 2476 Weight: 1.00 // 1 50 ENSP00000466690/1-335 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010727/1-338 ---------- ---------- ---------- ---------- ---------- bmy_06130T0/1-390 MDYREKSDEW WKHKRSYSKS ENGDLILIIT DVVYRPKRYR LKLCKLHSHL ENSTTRP00000013317/1-335 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000466690/1-335 ---------- ---------- ----MTTVTV TTEIPPRDKM EDNSALYEST ENSBTAP00000010727/1-338 ---------- ---------- ----MTTVTG TATVPQGGKT EDDSAMYESP bmy_06130T0/1-390 RFSQLTLDVT IVPCDVAAEQ LDFTMTAVTV TTTVPLKGKI EDNTASYEST ENSTTRP00000013317/1-335 ---------- ---------- ----MTAVTV TTTVPLKGKI EDKSASYEST 101 150 ENSP00000466690/1-335 SAHIIEETEY VKKIRTTLQK IRTQMFKDEI RHDSTNHKLD AKHCGNLQQG ENSBTAP00000010727/1-338 SAHIIEETEY VRKIRTTLEK IRNQIFRDEV RHNSANHKLD AKRCGNIQNG bmy_06130T0/1-390 SAHIIEETEY VKKIRTTLEK IRNQIFKDEV RHNSTNHKQD AKHCRHIQNG ENSTTRP00000013317/1-335 SAHIIEETEY VKKIRTTLEK IRNQIFKDEV RHNNTNHKQD ARHCRHVQNG 151 200 ENSP00000466690/1-335 SDSEMDPSCC SLDLLMKKIK GKDLQLLEMN KENEVLKIKL QASREAGAAA ENSBTAP00000010727/1-338 SDSAADFSGG SLDPLMERIK GKDLQLSEMN KENEVLKIKL EASREAGAVA bmy_06130T0/1-390 FDSELDPSCC SLDLLMERIK GKDLQLLEMN KENEVLKIKL EASREAGAAA ENSTTRP00000013317/1-335 LDSEMDPSCC SLDLLMERIK GKDLQLLEMN KENEVLKIKL EASREAGAVA 201 250 ENSP00000466690/1-335 LRNVAQRLFE NYQTQSEEVR KKQEDSKQLL QVNKLEKEQK LKQHVENLNQ ENSBTAP00000010727/1-338 LRNVAQRLLE NYQTRSEEVR KKHEDRRHLL QVDKLEKEQK LKQHVENLDQ bmy_06130T0/1-390 LRNVAQRLFE NYQTQSKEVR QKHEDSRHLL QVNTLEKEXK LKQHVENLNQ ENSTTRP00000013317/1-335 LRNVAQRLFE NYQTQSKEVR KKHEDSRHLL QVNTLEKEQK LKQHVENLNQ 251 300 ENSP00000466690/1-335 VAEKLEEKHS QITELENLVQ RMEKEKRTLL ERKLSLENKL LQLKSSATYG ENSBTAP00000010727/1-338 IAEKLEEKHK QITELENLVQ RMEKEKRTLL EKKLSLENKL LHLKSNATNA bmy_06130T0/1-390 IAEKLEEKHN QITELENLVQ RMEKEKRTLL EKKLSLENKL LHLKSKATYA ENSTTRP00000013317/1-335 IAEKLEERHN QITELENLVQ RMEQEKRTLL EKKLSLENKL LHLKSNATYA 301 350 ENSP00000466690/1-335 K---SCQDLQ REISILQEQI SHLQFVIHSQ HQNLRSVIQE MEGLKNNLKE ENSBTAP00000010727/1-338 KSISSCQDLQ KEISLLQEQI SHLQFVIHSQ HQNLRSVIQE MEALKNNLKE bmy_06130T0/1-390 K---SCQDLQ KEISLLQEQI SHLQFVIHSQ HQNLRSVIQE MEGLKNNLKE ENSTTRP00000013317/1-335 K---SCQDLQ KEISLLQEQI SHLQSVIHSQ HQSLRSVIQE MEGLKNNLKE 351 400 ENSP00000466690/1-335 QDKRIENLRE KVNILEAQNK EL-KTQVALS SETPRTKVSK AVSTSELKTE ENSBTAP00000010727/1-338 QDKRIEDLQE KVNILEAQNK EL-KAKVALW PETPGTKVSK AVSTSELKTE bmy_06130T0/1-390 QDKRIEDLKE KVNILEAQED DISENQTNIY SK-------K GTLSSKLTNG ENSTTRP00000013317/1-335 QDKRIEDLKE KVNILEAQNK EL-KTKVALW SEIPRPKVSK AVSTSELKTE 401 450 ENSP00000466690/1-335 GVSPYLMLIR LRK ENSBTAP00000010727/1-338 DTTPYLMLVR LRK bmy_06130T0/1-390 ---------- --- ENSTTRP00000013317/1-335 SMTPYLMLVR LRK