KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:07 2014 Check: 00 .. Name: ENSP00000324191/1-272 Len: 273 Check: 4139 Weight: 1.00 Name: ENSBTAP00000010748/1-267 Len: 273 Check: 7250 Weight: 1.00 Name: ENSTTRP00000005959/1-273 Len: 273 Check: 8873 Weight: 1.00 Name: BACU015791/1-273 Len: 273 Check: 9134 Weight: 1.00 Name: bmy_05158T0/1-273 Len: 273 Check: 8966 Weight: 1.00 // 1 50 ENSP00000324191/1-272 MSSQELVTLN VGGKIFTTRF STIKQFPASR LARMLDGRDQ EFKMVGGQIF ENSBTAP00000010748/1-267 MSGQELVTLN VGGKVFTTRS STLQQFPGSR LMRMLDGRDK EFKMVDGQIF ENSTTRP00000005959/1-273 MSSQELVTLN VGGKIFTTRS STLKQFPASR LTRMLDGRDQ EFKMVGGQIF BACU015791/1-273 MSSQELVTLN VGGKIFTTRS STLKQFPASR LTRMLDGRDQ EFKMVGGQIF bmy_05158T0/1-273 MSSQELVTLN VGGKIFTTRS STLKQFPASR LTRMLDGRDQ EFKMVGGQIF 51 100 ENSP00000324191/1-272 VDRDGDLFSF ILDFLRTHQL LLPTEFSDYL RLQREALFYE LRSLVDLLNP ENSBTAP00000010748/1-267 VDRDGVLFSF ILDFLRTQQL LLPTDFSDHL RLQREALFYE LNPLVDLLNQ ENSTTRP00000005959/1-273 VDRDGVLFSF VLDFLRTHQL LLPTDFSDYL RLQREAVFYE LDPLVDLLNQ BACU015791/1-273 VDRDGVLFSF ILDFLRTHQL LLPTDFSDYL RLQREALFYE LYPLVDLLNQ bmy_05158T0/1-273 VDRDGVLFSF ILDFLRTHQL LLPTDFSDYL RLQREALFYE LDPLVDLLNQ 101 150 ENSP00000324191/1-272 -YLLQPRPAL VEVHFLSRNT QAFFRVFGSC SKTIEMLTGR ITVFTEQPSA ENSBTAP00000010748/1-267 EHKLQPRPAL VEVHFLSRNT QAFFRVFGSC SKTIEMLTGR ITVFIEQPSA ENSTTRP00000005959/1-273 EHLLQPRPAL VEVHFLSRNT QAFFRVFGSC SKTIEMLTGR ITVFIEQPSA BACU015791/1-273 EHLLQPRPAL VEVHFLSRNT QAFFRVFGSC SKTIEMLTGR ITVFIEQPSA bmy_05158T0/1-273 EHLLQPRPAL VEVHFLSRNT QAFFRVFGSC SKTIEMLTGR ITVFIEQPSA 151 200 ENSP00000324191/1-272 PTWNGNFFPP QMTLLPLPPQ RPSYHDLVFQ CGSDSTTDNQ TGVRYVSIKP ENSBTAP00000010748/1-267 PASSSNSF-P QMTLLPLPPQ RPSYHDLVFQ CGSDSTTDNQ TRIRYISIKP ENSTTRP00000005959/1-273 PTWSSNSFPP QMTLLPLPPQ RPSYHDLVFQ CGSDSTTDNQ TGVRYVSIKP BACU015791/1-273 RTWSSNSFRP QMTLLPLPPQ RPSYHDLVFQ CGSDSTTDNQ TGIRYVSIKP bmy_05158T0/1-273 PTWSSNSYPP QMTLLPLPPQ RPSYHDLVFQ CGSDSMTDNQ TGIRYVSIKP 201 250 ENSP00000324191/1-272 DNRKLANGTN VLGLLIDTLL KEGFHLVSTR TVSSEDKTEC YSFERIKSPE ENSBTAP00000010748/1-267 DNRKLANGTN VLGLLIDTLL MEGFHLVGTR TVSSEDRTEC YSFERIKKPD ENSTTRP00000005959/1-273 DNRKLANGTN VLGLLIDTLL MEGFHLVSTR TVSSEDKTEC YSFERIKKPE BACU015791/1-273 DNRKLANGTN VLGLLIDTLL MEGFHLVSTR TVSSEDKTEC YSFERIKKPE bmy_05158T0/1-273 DNRKLANGTN VLGLLIDTLL MEGFHLVSTR TVSSEDKTEC YSFERIKKPE 251 300 ENSP00000324191/1-272 VLITNETPKP ETIIIPEQSQ IKK ENSBTAP00000010748/1-267 ALAMNKTLKS ETTLMPEQ-- --- ENSTTRP00000005959/1-273 ALAMNKTLKP ETTLMPEQSQ KKK BACU015791/1-273 ALAMNKTLKP ETTLMPEQSQ KKK bmy_05158T0/1-273 ALAMNKTLKP ETTLMPEQSQ KKK