KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:08 2014 Check: 00 .. Name: ENSTTRP00000001615/1-940 Len: 983 Check: 5730 Weight: 1.00 Name: ENSP00000301280/1-956 Len: 983 Check: 1695 Weight: 1.00 Name: ENSBTAP00000010763/1-964 Len: 983 Check: 6637 Weight: 1.00 Name: bmy_15826T0/1-482 Len: 983 Check: 8125 Weight: 1.00 Name: BACU002606/1-963 Len: 983 Check: 2254 Weight: 1.00 // 1 50 ENSTTRP00000001615/1-940 ---------- --------MD CKDRPAFPVK KLIQARLPFK RLNLVSKEKT ENSP00000301280/1-956 MLEELECGAP GARGAATAMD CKDRPAFPVK KLIQARLPFK RLNLVPKGKA ENSBTAP00000010763/1-964 MLEEPECGAP GARGEAAAMD CKDRPAFPVK KLIQARLPFK RLNLVPKEKI bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 ---------- --------MD CKDRPAFPVK KLIQARLPFK RLNLVPKEKT 51 100 ENSTTRP00000001615/1-940 DDGLDDMGGA QGAPVQGHVP GLETSLDHLE DSCHMGSDID FRPKLVNGKG ENSP00000301280/1-956 DDMSDD---- QGTSVQSKSP DLEASLDTLE NNCHVGSDID FRPKLVNGKG ENSBTAP00000010763/1-964 DDGLDDTGGS RAGPVQTQLH NLETSLDHLE -NCHMGSDID FRPKLVNGKG bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 DDGLDDMGGA QGAPVQGHVP DLETSLDHLE DNCHMGSDID FRPKLVNGKG 101 150 ENSTTRP00000001615/1-940 PLDNFLRSQV ETSIGQTVVI IDLTEDSSDP PDGTMGHDKL NSAASPSQEN ENSP00000301280/1-956 PLDNFLRNRI ETSIGQSTVI IDLTEDSNEQ PDSLVDHNKL NSEASPSREA ENSBTAP00000010763/1-964 PLDNFLRSQV ETSIGQAVVI IDLTEDSSNP PDNMVGHNKL NSAASSAQKN bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 PLDNFLRSQV KTSIGQTVAI IDLTEDSSDP PDGTMGHDKL NSAASPSQEN 151 200 ENSTTRP00000001615/1-940 VNGVTDEAGD DRGLPMVSQK DELAFPEEAL SDLPCKTEAG GADSGGVERR ENSP00000301280/1-956 INGQREDTGD QQGLLKAIQN DKLAFPGETL SDIPCKTEEE GVGCGGAGRR ENSBTAP00000010763/1-964 INGVPDKAGD DRGLPKARQK DELASPEEAL SEVPCKTEAG GADSGGADRR bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 VNRVTDEAGD DRGLRTVSQK DELAFPEEAL SDLPCKTEAG GADSGGAERR 201 250 ENSTTRP00000001615/1-940 GLSQKGSPQS LPELTGGLRT CSEKDQDGWS GARGILFKGK VPVVVLQDIL ENSP00000301280/1-956 GDSQECSPRS CPELTSGPRM CPRKEQDSWS EAGGILFKGK VPMVVLQDIL ENSBTAP00000010763/1-964 GLTQRGSPQN CPKLTGDLSM WSEKDRDGWS EAGGILFKGK MPVVVLQDIL bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 GLAQKGSPQS CPELTGGLRT CSEKDQDGWS GARSFLFKGK VPVVVLQDIL 251 300 ENSTTRP00000001615/1-940 AARTRA-KSP PATPPGQAVP SESEALESSP EEDSVLSHSS LSSSSPTSSP ENSP00000301280/1-956 AVRPPQIKSL PATPQGKNMT PESEVLESFP EEDSVLSHSS LSSPSSTSSP ENSBTAP00000010763/1-964 ALRPPA-RSP PATPPSQAVP SESETPESSP EEDLALSHSS LSSSSPTSSP bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 AATPRA-KSP PATPPGQAVP SESEALESSP EEDSVLSHSS LSSSSPTSSP 301 350 ENSTTRP00000001615/1-940 EGQSAPAKQH SSPSPLPAST PVRR------ ---------- ISKKLVRGSA ENSP00000301280/1-956 EGPPAPPKQH SSTSPFPTST PLRR------ ---------- ITKKFVKGST ENSBTAP00000010763/1-964 EGQSVPTKLH TGPSPFPAST PVCR------ ---------- ITKKLVRGSA bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 EGQSAPAKQH SSPSPLPAST PVRRVSISPE SVPSESRGFW ISKKLVKGSA 351 400 ENSTTRP00000001615/1-940 EKNKMRPQRX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301280/1-956 EKNKLRLQRD QERLGKQLKL RAEREEKEKL KEEAKRAKEE AKKKKEEEKE ENSBTAP00000010763/1-964 EKNKMKLQRD KERLRRQLKL RAEKEEKEKL REEAKRAKEE ARKKREEEKE bmy_15826T0/1-482 ---------- ---------- ---------- ---------- ---------- BACU002606/1-963 EKNKMRLQRD KERLGKQLKL WAEKEEKEKL REEAKGAKEE ARKKREEEKE 401 450 ENSTTRP00000001615/1-940 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301280/1-956 LKEKERREKR EKDEKEKAEK QRLKEERRKE RQEALEAKLE EKRKKEEEKR ENSBTAP00000010763/1-964 LKEKERREKR EKDEKEKAEK QRLKEERRKE RQEALEAKLE EKRKKEEEKR bmy_15826T0/1-482 ---------- ---------- ---------- --MSLRAKLE EKRKKEEEKR BACU002606/1-963 LKEKERREKR EKDEKEKAEK QRRKEERRKE RQEALEAKLE EKRKKEEEKR 451 500 ENSTTRP00000001615/1-940 XXXXXXRIKA EKAEITRFFQ KPKTPQAPKT LAGSCGKFAP FEIKEHMVLA ENSP00000301280/1-956 LREEEKRIKA EKAEITRFFQ KPKTPQAPKT LAGSCGKFAP FEIKEHMVLA ENSBTAP00000010763/1-964 LREEEKRIKA EKAEITRFFQ KPKTPQAPKT LAGSCGKFAP FEIKEHMVLA bmy_15826T0/1-482 LREEEKRIKA EKAEITRFFQ KPKTPQAPKT LAGSCGKFAP FEIKEHMVLA BACU002606/1-963 LREEEKRIKA EKAEITRFFQ KPKTPQAPKT LAGSCGKFAP FEIKEHMVLA 501 550 ENSTTRP00000001615/1-940 PRCRTAFDQD LCDQLDQLLR QQSGEXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301280/1-956 PRRRTAFHPD LCSQLDQLLQ QQSGEFSFLK DLKGRQPLRS GPTHVSTRNA ENSBTAP00000010763/1-964 PRCRTAFDQD LCDQLDQLLQ QQSSEFSFLQ DLKSRRPLRS GPTVVSNRNT bmy_15826T0/1-482 PRCRTAFDQD LCDQLDQLLR QQSGEFSFLK DLKSRQPLRS GPTVVCNQNT BACU002606/1-963 PRCRTAFDQD LCDQLDQLLR QQSGEFSFLK DLKSRRPLRS GPTVVCNQNT 551 600 ENSTTRP00000001615/1-940 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000301280/1-956 DIFNSDVVIV ERGKGDGVPE RRKFGRMKLL QFCENHRPAY WGTWNKKTAL ENSBTAP00000010763/1-964 DLSNSDVVIV ESSKVDGVPE RRKFGRMKLL QFSENHRPAY WGTWNKKTTV bmy_15826T0/1-482 DLFNSDVVIV ESSKVDDVPE RRRFGRMKLL QFSENHRPAY WGTWNRKTTV BACU002606/1-963 DLFNSDVVIV ESSKVDDVPE RRRFGRMKLL QFSENHRPAY WGTWNRKTTV 601 650 ENSTTRP00000001615/1-940 XXXXXXXXXX XSLLDYEVDS DEEWEEDEPG ESLSHSEGDD DDEVGEDEDE ENSP00000301280/1-956 IRARDPWAQD TKLLDYEVDS DEEWEEEEPG ESLSHSEGDD DDDMGEDEDE ENSBTAP00000010763/1-964 IRPRDPWAQD RDLLDYEVDS DEEWEEEEPG ESLSHSEGDD DDDVGEDEDE bmy_15826T0/1-482 IHPRDPWAQD RDLLDYEVDS DEEWEEEEPG ESLSHSEGDD DDEVGEDEDE BACU002606/1-963 IHPRDPWAQD RDLLDYEVDS DDEWEEEEPG ESLSHSEGDD DDEVGEDEDE 651 700 ENSTTRP00000001615/1-940 DDGFFVPHGY LSEDEGVTEE CADPENHKVR QKLKAKEWDE FLAKGKRFRI ENSP00000301280/1-956 DDGFFVPHGY LSEDEGVTEE CADPENHKVR QKLKAKEWDE FLAKGKRFRV ENSBTAP00000010763/1-964 DDGFFVPHGY LSEDEGVTEE CADPENHKVR QKLKAKEWDE FLAKGKRFRI bmy_15826T0/1-482 DDGFFVPHGY LSEDEGVTEE CADPENHKVR QKLKAKEWDE FLAKGKRFRI BACU002606/1-963 DDGFFVPHGY LSEDEGVTEE CADPENHKFR QKLKAKEWDE FLAKGKRFRI 701 750 ENSTTRP00000001615/1-940 LQPVKIGCVW AADRD-SGAD LKVLQQFTAC LLETAPPEEE QTPKASKKEK ENSP00000301280/1-956 LQPVKIGCVW AADRDCAGDD LKVLQQFAAC FLETLPAQEE QTPKASKRER ENSBTAP00000010763/1-964 LQPVKIGCIW AADKD-GGAD LKVLQQFTAC LLETVPPEEE QTPKASKREK bmy_15826T0/1-482 LQPVKIGCVW AADRD-SGAD LKVLQQFTAC LLETVPPEEE QTPKASKREK BACU002606/1-963 LQPVTIGCVW AADRD-SGAD LKVLQQFTAC LLETVPPEEE QTPKASKREK 751 800 ENSTTRP00000001615/1-940 KDQQILAQLL PLLHGNVNGS KVIIREFQEC CRRGLLSKDA GSPR------ ENSP00000301280/1-956 RDEQILAQLL PLLHGNVNGS KVIIREFQEH CRRGLLSNHT GSPR------ ENSBTAP00000010763/1-964 RDQQILAQLL PLLHGNVNGS KVIIREFQEC CRRGLLSRDA GSPEDSAASP bmy_15826T0/1-482 RDQQILAQLL PLLHGNVNGS KVIIREFQEC CRRGLLSKDA GSPELSAASP BACU002606/1-963 RDQQILAQLL PLLHGNVNGS KVIIREFQEC CRRGLLSKDA GSPELSAASP 801 850 ENSTTRP00000001615/1-940 -SPPTTRPQT PTAGEDTAVP SKARLKRIIS ENSVYEKRPD YRMCWYVHPQ ENSP00000301280/1-956 -SPSTTYLHT PTPSEDAAIP SKSRLKRLIS ENSVYEKRPD FRMCWYVHPQ ENSBTAP00000010763/1-964 PSPGPARPQT PTASEDVAVP SKARLKRIIS ENSVYEKRPD FRMCWYVHPQ bmy_15826T0/1-482 PSPGPSRPQT PTAGEDTAVP SKARLKRIIS ENSVYEKRPD YRMCWYVHPQ BACU002606/1-963 PSPGPSRPQT PTAGEDTAVP SKARLKRIIS ENSVYEKRPD YRMCWYVHPQ 851 900 ENSTTRP00000001615/1-940 VLKNFAQEHL PVPCQWSYVT TVPSATREDS GSVPAAGPSQ GTPVSLKRKS ENSP00000301280/1-956 VLQSFQQEHL PVPCQWSYVT SVPSAPKEDS GSVPSTGPSQ GTPISLKRKS ENSBTAP00000010763/1-964 VLKSFAQEHL PVPCQWSYVT AVPSATREDS GSVPAPGPGQ GMPVSLKRKS bmy_15826T0/1-482 V--------- ---------- ---------- ---------- ---------- BACU002606/1-963 VLKSFAQEHL PVPCQWSYVT TVPSATREDS GSVPAPGPSQ GTPVSLKRKS 901 950 ENSTTRP00000001615/1-940 VGSMCITQFM KKRRHDGQVG AGDLDGFQAD TEEEEEEEGD CVIMDISDVG ENSP00000301280/1-956 AGSMCITQFM KKRRHDGQIG AEDMDGFQAD TEEEEEEEGD CMIVDVPDAA ENSBTAP00000010763/1-964 AGSMCITQFM KKRRHDGQVG TGDLDDFQAD TEEEDDDEGD CVIMDISDVG bmy_15826T0/1-482 ---------- ---------G AGDLDGFQAD TEEEEEEEGD CVIVDISDVG BACU002606/1-963 AGSMCITQFM KKRRHDGQVG AGDLDGFQAD TEEEEEEEGD CVIMDISDVG 951 1000 ENSTTRP00000001615/1-940 DIQAPCGTTP GAGGSVGMNT SESLVASSSL GPS ENSP00000301280/1-956 EVQAPCGAAS GAGGGVGVDT GKATLTSSPL GAS ENSBTAP00000010763/1-964 DIQAPCGTTS GAGGSVGMDT SESFVSPSSL RLS bmy_15826T0/1-482 DIQAPCGTTP GAGGSVGVDT SESLVASSSL GPS BACU002606/1-963 DIQAPCGTTS GAGGSVGVDT SESLVASSSL SPS