KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:11 2014 Check: 00 .. Name: ENSP00000348757/1-595 Len: 623 Check: 5024 Weight: 1.00 Name: ENSTTRP00000001681/1-596 Len: 623 Check: 7354 Weight: 1.00 Name: ENSBTAP00000010785/1-621 Len: 623 Check: 6745 Weight: 1.00 Name: bmy_16826T0/1-616 Len: 623 Check: 8132 Weight: 1.00 // 1 50 ENSP00000348757/1-595 MTSPLCRAAS ANALPPQDQA STPSSRVKGR EASGKPSHLR GKGTAQAWTP ENSTTRP00000001681/1-596 MTSPLSWAAS ANAMPFQVQI SAP-SKVKGG QAQIKPYHPR GKGSVQAWHS ENSBTAP00000010785/1-621 MTSPLCWAAA SNAMPSQDQI STP-SKVKAT QVQLKPYRSR GKGLVPVWHS bmy_16826T0/1-616 MTSPLCWAAS ANAMPSQDQI STP-SKVKGS QAQIKPYHPR GKGSVQAWHS 51 100 ENSP00000348757/1-595 GRSKGGSFHR GAGKPSVHSQ VAELHKKIQL LEGDRKAFFE SSQWNIKKNQ ENSTTRP00000001681/1-596 LHSKAAPFHA SEGKSAVHTQ VAELQRKLQL LEGDRKAFYE TSQWNIKKNQ ENSBTAP00000010785/1-621 LHSKAGPLHA SEGKSAVNMQ VAELQRKIQL LEGDRKAFYE STQWNIKKNQ bmy_16826T0/1-616 LHSKAAPFHA SEGKSAVHTQ VAELHRKIQL LEGDRKAFYE STQWNIKKNQ 101 150 ENSP00000348757/1-595 ETISQLRKET KALELKLLDL LKGDEKVVQA VIREWKWEKP YLKNRTG-QA ENSTTRP00000001681/1-596 ETINQLHEET RALQLQLTDL LQGDEKVIQA VIREWKSEKP YLKNRTG-QA ENSBTAP00000010785/1-621 ETINQLREET RVLQLQLTAL LQGDEKVVQA VIREWKSEKP YLKNRTGQQA bmy_16826T0/1-616 ETINQLHEET RALQLQLTDL FQGDEKVIQA VIREWKSEKP YLKNRTGQQA 151 200 ENSP00000348757/1-595 LEHLDHRLRE KVKQQNALRH QVVLRQRRLE ELQLQHSLRL LEMAEAQNRH ENSTTRP00000001681/1-596 LEHLDHRLSE KVKQLNALRY QLGLRQKWLE ELQLQHSLRE LEMAEAKDSN ENSBTAP00000010785/1-621 LEHLDYRLNE KVKQLNALRH QLGLRQKWLE ELQLQHSLRE LEIAEAQDSN bmy_16826T0/1-616 LEHLDRRLSE KVKQLNALRY QLGLRQKWLE ELQLQHSLRE LEMAEAKDSN 201 250 ENSP00000348757/1-595 TEVAKTMRNL ENRLEKAQMK AQEAEHITSV YLQLKAYLMD ESLNLENRLD ENSTTRP00000001681/1-596 TEVAKTMRNL ENRLEKAQMK VEEAEHITNV YLQLKAYLQE ESLRLENRLD ENSBTAP00000010785/1-621 TEVAKTMRNL ENRLEKARMK AEEAEHITSV YLQLKAYLQE ESLHLGNRLD bmy_16826T0/1-616 TEVAKTMRNL ENRLEKAQMK VEEAEHITNV YLQLKAYLQE ESLRLENRLD 251 300 ENSP00000348757/1-595 SMEAEVVRTK HELEALHVVN QEALNARDIA KNQLQYLEET LVRERKKRER ENSTTRP00000001681/1-596 FMEAEVLRTK QELEELNLVN QEALNARDIA KXXXXXXXXX XXXXXXXXXX ENSBTAP00000010785/1-621 FMEAEVVRTK HELEELHLVN QEALNARDIA KNQLQYLEET VFRERKKRER bmy_16826T0/1-616 FMEAEMVRTK HELEELNLVN QEALNARDIA KNQLQHLEKT VFRERKKRER 301 350 ENSP00000348757/1-595 YISECKKRAE EKKLENERME RKTHREHLLL QSDDTIQDSL HAKEEELRQR ENSTTRP00000001681/1-596 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000010785/1-621 YLTECKKRAE EKKLQNERME RKTQREHVLL QSDDTLQDSM YSKEEELKRR bmy_16826T0/1-616 YLTECKKRAE ERKLKNERME RKTQREQVLL QSDDRLQESV RSKEEELRRR 351 400 ENSP00000348757/1-595 WSMYQMEVIF GKVKDATGTD ETHSLVRRFL AQGDTFAQLE TLKSENEQTL ENSTTRP00000001681/1-596 XXXXXXXXXX XXXXDATGVA ETHAVVQRFL AQGDTFTQLE TLKSQNEQTL ENSBTAP00000010785/1-621 WSMYQMEVLF GKVKDATGVA ETHAVVRRFL AQGDTFTQLE MLKSENEQTL bmy_16826T0/1-616 WDVYQMDVLF GKVKDATGVA ETHAVVRQFL AQGDTFTQLE TLKSENEQTL 401 450 ENSP00000348757/1-595 VRLKQEKQQL QRELEDLKYS GEATLVSQQK LQAEAQERLK KEERRHAEAK ENSTTRP00000001681/1-596 MRLNQEKQRL QRELEDLKYS GETTLVSEQK LQVELQGRIK AEEQRRADTQ ENSBTAP00000010785/1-621 LRLKQEKQRL QQELEDLKYS GEALLVSEQK RQAELQGRLK MEEQRRADAQ bmy_16826T0/1-616 MRLKQEKQRL QRELEDLKYS GETMLVSEQK LQVELQGRIK AEEQRRADTQ 451 500 ENSP00000348757/1-595 DQLERALRAM QVAKDSLEHL ASKLIHITV- ---------- ---------- ENSTTRP00000001681/1-596 DQLQLAMWAM QMTKEGLEHL AGKLNHILV- ---------- ---------- ENSBTAP00000010785/1-621 NQLDRTMRAL QITKEGLEHL AGKLNHIVVA GPTYEEGSPG ASLDTKGSAT bmy_16826T0/1-616 DRLELAMRAM QMAKEGLEHL AGKLNHVLVA GPAHEE---- APQDVRGGAS 501 550 ENSP00000348757/1-595 ----EDGRFA GKELDPQADN YVPNLLGLVE EKLLKLQAQL QGHDVQEMLC ENSTTRP00000001681/1-596 ----EAGHFA RKELDPKAGD YLPNLLGLVE EKLLKLQAQL QNQNVPELLR ENSBTAP00000010785/1-621 PQPQETGRSV GK-MDPKVDD YLPNLLGLVE EKLLKLHSQL ENHNVPEMLR bmy_16826T0/1-616 --TQEAGRFA GKELDPKAGD YLPNLLGLVE EKLLKLQAQL QNHNVPEMLR 551 600 ENSP00000348757/1-595 HIANREFLAS LEGRLPEYNT RIALPLATSK DKFFD-EESE EEDNEVVTRA ENSTTRP00000001681/1-596 HIADREFYST LEGKLPMYNT RIALPVAGLK DRFFDEEESE DEDNNVVTRA ENSBTAP00000010785/1-621 HIVDLEFYAT LEGKLPSYNT RIALPVAGHK DKFFDEEESE EDDSDVVTRA bmy_16826T0/1-616 HIADCEFYST LEGKLPMYNT RIALPVAGRK DRFFDEEESE DEDNDVVTRA 601 650 ENSP00000348757/1-595 SLKIRSQKLI ESHKKHR-RS RRS ENSTTRP00000001681/1-596 ELKMRSQKLI ESRSKRRGRS RRS ENSBTAP00000010785/1-621 ALKMRSQKLI ESRSKRRGRS RRS bmy_16826T0/1-616 ALKMRSQKLI ESRSKRRGRS RRS