KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:12 2014 Check: 00 .. Name: ENSP00000299575/1-823 Len: 873 Check: 5644 Weight: 1.00 Name: BACU009728/1-813 Len: 873 Check: 145 Weight: 1.00 Name: ENSBTAP00000010797/1-822 Len: 873 Check: 6950 Weight: 1.00 Name: bmy_11092T0/1-764 Len: 873 Check: 9491 Weight: 1.00 Name: ENSTTRP00000007557/1-713 Len: 873 Check: 777 Weight: 1.00 // 1 50 ENSP00000299575/1-823 ---------- ---------- --------MA ASEAAAAAGS AALAAGARAV BACU009728/1-813 MWDDTQFHRH QKVWDVFQMS KGPGEDIDLF DMEQFKSSFK KILKRALKNV ENSBTAP00000010797/1-822 ---------- ---------- --------MA ASEAAAAADP AALASGAPAV bmy_11092T0/1-764 ---------- ---------- --------MA ASEAAAAAGP AALALGAAAV ENSTTRP00000007557/1-713 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000299575/1-823 PAATTGAAAA A-------SG PWVPPGPRLR GSRPRPAGAT QQPAVPAPPA BACU009728/1-813 TVSFRDAEEN AVWIRIAWGT QYRKPN-QYK PSYVVYYSQT PYAFTSSSQL ENSBTAP00000010797/1-822 PAAARGAAAA --------SG PWVPPG-RLR GSRPRPPPAR QQPAGSAPPA bmy_11092T0/1-764 PAAARGAAAA --------SG PWDPPG-RLR GSRARPTAAR QQPAGAAPPA ENSTTRP00000007557/1-713 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000299575/1-823 GELIQPSVSE LSRAVRTNIL CTVRGCGKIL PNSPALNM-- --HLVKSHRL BACU009728/1-813 KSNLPLLGQA LTIASKHHQI VKMDLRSRYL DSLKAIVFKQ YNQTFETHNS ENSBTAP00000010797/1-822 RELIQPSVSE LSRAVRTNIL CTVRGCGKIL PNSPALNM-- --HLVKSHRL bmy_11092T0/1-764 RELIQPSVSE LSRAVRTNIL CTVRGCGKIL PNSPALNM-- --HLVKSHRL ENSTTRP00000007557/1-713 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000299575/1-823 QDGIVNPTIR KDLKTGPKFY C---CPIEGC PRGPERPFSQ FSLVKQ---- BACU009728/1-813 TTPLQERSLG LDINMDSRII HENKIEKERV QRVTQEIFGD YPQPRLEFAQ ENSBTAP00000010797/1-822 QDGIVNPTVR KDLKTVPKFY C---CPIEGC PRGPDRPFSQ FSLVKQ---- bmy_11092T0/1-764 QDGIVNPTIR KDLKTVPKFY C---CPIEGC PRGPDRPFSQ FSLVKQ---- ENSTTRP00000007557/1-713 -DGIVNPTIR KDLKTVPKFY C---CPIEGC PRGPDRPFSQ FSLVKQ---- 201 250 ENSP00000299575/1-823 --HFMKMHAE KKHKCSKCSN SYGTEWDLKR HAEDCGKTFR CTCGCPYASR BACU009728/1-813 YKHFMKMHAE KKHKCSKCSN SYGTEWDLKR HAEDCGKTFQ CTCGCPYASR ENSBTAP00000010797/1-822 --HFMKMHAE KKHKCSKCSN SYGTEWDLKR HAEDCGKTFQ CTCGCPYASR bmy_11092T0/1-764 --HFMKMHAE KKHKCSKCSN SYGTEWDLKR HAEDCGKTFQ CTCGCPYASR ENSTTRP00000007557/1-713 --HFMKMHAE KKHKCSKCSN SYGTEWDLKR HAEDCGKTFQ CTCGCPYASR 251 300 ENSP00000299575/1-823 TALQSHIYRT GHEIPAEHRD PPSKKRKMEN CAQNQKLSNK TIESLNNQPI BACU009728/1-813 TALQSHIYRT GHEIPAEHRD PPSKKRKMEN CLHNQKLSCK TVESLSNQAT ENSBTAP00000010797/1-822 TALQSHIYRT GHEIPAEHRD PPSKKRKMEG CLHSQKLSRK TVESLSKQPI bmy_11092T0/1-764 TALQSHIYRT GHEIPAEHRD PPSKKRKMEN CLHNQKLSSK TVESLSNQAT ENSTTRP00000007557/1-713 TALQSHIYRT GHEIPAEHRD PPSKKRKMEN CLHNQKLSSK TVESLSNQAT 301 350 ENSP00000299575/1-823 PRPDTQELEA SEIKLEPSFE DSCGSNTDKQ TLTTPPRYPQ KLLLPKPKVA BACU009728/1-813 PRPDAQELET SEIKLVASFE DSCSSNARKQ TLPTPSRYPQ KLLLPKPKVA ENSBTAP00000010797/1-822 PRPDAPQLET SEIKLVASFE DSCSSNAKQQ TLAAAPRYPQ KLLLPKPKVA bmy_11092T0/1-764 PRPDAQELET SEIKLVASFE DSCSSNARKQ TLPTPPRYPQ KLLLPKPKVA ENSTTRP00000007557/1-713 PRPDAQELET SEIKLVASFE DSCSSNARKQ TLPTPPRYPQ KLLLPKPKVA 351 400 ENSP00000299575/1-823 LVKLPVMQFS VMPVFVPTAD SSAQPVVLGV D-QGSATGAV HLMPLSVGTL BACU009728/1-813 LVKLPVMQLS PVPVFVPTAD SSAQPVVLGV DHQGSAPGAV HLLPLSIGTL ENSBTAP00000010797/1-822 LVKLPVMQFS PVPVFVPTAD SSAQPVVLGV DHQGSAPGAV HLLPLSIGTL bmy_11092T0/1-764 LVKLPVMQLS PVPVFVPTAD SSAQPVVLGV DHQGSAPGAV HLLPLSIGTL ENSTTRP00000007557/1-713 LVKLPVMQLS PVPVFVPTAD SSAQPVVLGV DHQGSTHGAV HLLPLSVGTL 401 450 ENSP00000299575/1-823 ILGLDSEACS LKESLPLFKI ANPIAGEPIS TGVQVNFGKS PSNPLQELGN BACU009728/1-813 ILGLDSEACS LKESLPLSKI VNPVAVEPIS TGVQVNFGKS PSNPLQELGN ENSBTAP00000010797/1-822 ILSLDSEACS LKESLPLSKV VNPVAVEPIS TGIQVNLGKS PFSPLQELGN bmy_11092T0/1-764 ILGLDSEACS LKESLPLSKI VNPVAVEPIS TGVQVNFGRS PSNPLQELGN ENSTTRP00000007557/1-713 ILGLDSESCS LKESLPLSKI VNPVAVEPVS TGVQVNLGKS PSNPLQELGN 451 500 ENSP00000299575/1-823 TCQKNSISSI NVQTDLSYAS QNFIPSAQWA TADSSVSSCS QTDLSFDSQV BACU009728/1-813 TCQKNSISSI NVQTELSYTT QHFIPSAEWV SPDSSVSSCS QTDLTFGSQV ENSBTAP00000010797/1-822 TCQKNSISSI NVQTDLSYTT PQFMPTAQWA SPDSSVSSCS QTDLTFGSQV bmy_11092T0/1-764 TCQKNSISSI NVQTELSYTT QHFIPSAEWV SPDSSVSSCS QTDLTFGSQV ENSTTRP00000007557/1-713 TCQKNSISSI NVQTELSYTI PHFIPSAEWA SPDSSVSSCS QTDLTFGSQV 501 550 ENSP00000299575/1-823 SLPISVHTQT FLPSSKVTSS IAAQTDAFMD TCFQSGGVSR ETQTSGIESP BACU009728/1-813 SLPISVHTQT FLPSSKVTSS IAAQTDVFID ASFQSGGISR ETQTSGMQSA ENSBTAP00000010797/1-822 SLPISVQTQT FLPSSKVTSS IAAQTDAFID ASFQPGGISR ETQTSGMQSP bmy_11092T0/1-764 SLPISVHTQT FLPSSKVTSS IAAQTDVFID ASFQSGGISR ETQTSGMQSA ENSTTRP00000007557/1-713 SLPISVHTQT FLPSSKVTSS IAAQTDVFID ASFQSGGISR ETQTSGMQSP 551 600 ENSP00000299575/1-823 TDDHVQMDQA GMCGDIFESV HSSYNVATGN IISNSLVAET VTHSLLPQNE BACU009728/1-813 TDDRVQMDQG VMCGDIFESV PSSYGVSTDN IISSSLVAET VTHGLLPQNH ENSBTAP00000010797/1-822 ADDRVQMDQA VMCGDIFESV HSSYGVSTDS IISSSLVAES VTHDLLPQNH bmy_11092T0/1-764 TDDRVQMDQG VMCGDIFESV PSSYGVSTDN IISSSLVAET VTHGLLPQNH ENSTTRP00000007557/1-713 TDDRVQMDQA VMCGDIFESV HSSYGVSTDS IISSSLVAET VTHGLLPQNH 601 650 ENSP00000299575/1-823 PKTLNQDIEK SAPIINFSAQ -NSMLPSQNM TDNQTQTIDL LSDLENILSS BACU009728/1-813 PKTLNQDIEK SAPIINFSAQ -NSMLSSQNM TDNQTQTIDL LSDLENILSS ENSBTAP00000010797/1-822 AKTLTQDIEK STPIINFSAP -NSMLSSQNM TDNQTQTMDL LSDLENILSS bmy_11092T0/1-764 PKTLNQDIEK SAPIINFSAQ -NSMLSSQNM TDNQTQTIDL LSDLENILSS ENSTTRP00000007557/1-713 PKTLNQDIEK SAPIINFSAQ NNSILSSQNM TDNQTQTIDL LSDIENILSS 651 700 ENSP00000299575/1-823 NLPAQTLDHR SLLSDTNPGP DTQLPSGPAQ NPGIDFDIEE FFSASNIQTQ BACU009728/1-813 NLPGQTLDNR SLLSDTSTGP DTQLPSGPTQ NPAIDFDIEE FFSASNIQTQ ENSBTAP00000010797/1-822 NLPGQTLDNR SLLSDTNTGP DTQLPSGPTQ NPAIDFDIEE FFSASNIQTQ bmy_11092T0/1-764 NLPGQTLDNR SLLSDTSTGP DTQLPSGPTQ NPAIDFDIEE FFSASNIQTQ ENSTTRP00000007557/1-713 NLPGQTLDNR SLLSDTNTGP DTQLPSGPAQ NPAIDFDIEE FFSASNIQTQ 701 750 ENSP00000299575/1-823 TEESELSTMT TEPVLESLDI ETQTDFLLAD TSAQSYGCRG NSNFLGLEMF BACU009728/1-813 TEESELSTMT TEPVLESLDI ETQTDFLFAD ACAQSYSCRG NSNFLGLEMF ENSBTAP00000010797/1-822 TEESELSTMT TEPVLESLDI ETQTDFFLAD PSAQAYSCRG NSSFLGLEMF bmy_11092T0/1-764 TEESELSTMT TEPVLESLDI ETQTDFLFAD ACAQSYSCRG NSNFLGLEMF ENSTTRP00000007557/1-713 TEESELSTMT TEPVLESLDI ETQTDFFLAD ACAQSYSCRG NSNFLALEMF 751 800 ENSP00000299575/1-823 DTQTQTDLNF FLDSSPHLPL GSILKHSSFS VSTDSSDTET QTEGVSTAKN BACU009728/1-813 DTQTQTDLNF FLDSSPHLPL GSILKHSSFS MSTDSSDTET QTEGISTAKN ENSBTAP00000010797/1-822 DTQTQTDLNF FLDSSPRLPL GSILKHSSFS MSTDSSDTET QTDGISTAKN bmy_11092T0/1-764 DTQTQTDLNF FLDSSPHLPL GSILKHSSFS MSTDSSDTET QTEGISTAKN ENSTTRP00000007557/1-713 DTQTQTDLNF FLDSSPHLPL GSILKHSSFS MSTDSSDTET QTEGISTAKN 801 850 ENSP00000299575/1-823 IPALESKVQL NSTETQTMSS GFETLGSLFF TSNETQTAMD DFLLADLAWN BACU009728/1-813 LPALESKVQL NSAET----- ---------- ---------- ---------- ENSBTAP00000010797/1-822 LPALESKVQL NSAETQTMNS GFETLGSLFF TSNETQTAMD DFLLADLAWN bmy_11092T0/1-764 LPALESKVQL NSAET----- ---------- ---------- ---------- ENSTTRP00000007557/1-713 LPALESKVQL NSAETQTMNS GFETLGSLFF TSNETQTAMD DFLLADLAWN 851 900 ENSP00000299575/1-823 TMESQFSSVE TQTSAEPHTV SNF BACU009728/1-813 ---------- ---------- --- ENSBTAP00000010797/1-822 TMESQFSSVE TQTCAELHPV SNF bmy_11092T0/1-764 ---------- ---------- --- ENSTTRP00000007557/1-713 TMESQFSSVE TQTCAELHPV SNF