KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:15 2014 Check: 00 .. Name: ENSP00000302851/1-602 Len: 821 Check: 3884 Weight: 1.00 Name: ENSBTAP00000010823/1-603 Len: 821 Check: 9831 Weight: 1.00 Name: BACU004119/1-759 Len: 821 Check: 3676 Weight: 1.00 Name: bmy_07877T0/1-677 Len: 821 Check: 6140 Weight: 1.00 Name: ENSTTRP00000003519/1-602 Len: 821 Check: 4464 Weight: 1.00 // 1 50 ENSP00000302851/1-602 ---------- ---------- ------MRAQ E--------- ---------- ENSBTAP00000010823/1-603 ---------- ---------- ------MRAR E--------- ---------- BACU004119/1-759 MRLLLLLLLL GAWTIPGGLG DRAPLTATAP ELDDEEKFSA HMPAHLRCDA bmy_07877T0/1-677 ---------- --MVCSGGTA HTCAPKMRAQ E--------- ---------- ENSTTRP00000003519/1-602 ---------- ---------- ------MRAQ E--------- ---------- 51 100 ENSP00000302851/1-602 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010823/1-603 ---------- ---------- ---------- ---------- ---------- BACU004119/1-759 CRAVAYQMWQ HLTKAETKLH TLDSGGRGKL SESVYTDVLD RSCSQTWQGY bmy_07877T0/1-677 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003519/1-602 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000302851/1-602 ---------- ---------- ---------- ---------- DLEGR----- ENSBTAP00000010823/1-603 ---------- ---------- ---------- ---------- DAEGQ----- BACU004119/1-759 GVGEVDQVKR LMGPGLNKGP EPSISVIIMG APWPTSFWAL GPGGRPRPSP bmy_07877T0/1-677 ---------- ---------- ---------- ---------- DPEGQ----- ENSTTRP00000003519/1-602 ---------- ---------- ---------- ---------- DPEGQ----- 151 200 ENSP00000302851/1-602 ---------- ----TQHE-- -----TTRDP STPLPTEPKF DMLYKIEDVP ENSBTAP00000010823/1-603 ---------- ----TQHESL GSAGTSTRDP PVSLSTEPKF DMLYKIEDVP BACU004119/1-759 LDSNKTSDLE SFSLQKHESL GSAGTSTKDP PTALCKEPKS DMLYNIVDVP bmy_07877T0/1-677 ---------- ----TQHESL GSAGTSTKDP PTALCKEPKS DMLYKIEDVP ENSTTRP00000003519/1-602 ---------- ----TQHE-- -----STKDP PTALCTEPKS DMLYKIEDVP 201 250 ENSP00000302851/1-602 PWYLCILLGF QHYLTCFSGT IAVPFLLAEA LCVGHDQHMV SQLIGTIFTC ENSBTAP00000010823/1-603 PWYLCILLGF QHYLTCFSGT IAVPFLLAEA LCVGRDQYMV SQLIGTIFTC BACU004119/1-759 PWYLCVLLGF QHYLTCFSGT IAVPFLLAEA LCVGRDQYMV SQLIGTIFTC bmy_07877T0/1-677 PWYLCVLLGF QHYLTCFSGT IAVPFLLAEA LCVGRDQYMV SQLIGTIFTC ENSTTRP00000003519/1-602 PWYLCVLLGF QHYLTCFSGT IAVPFLLAEA LCVGRDQYMV SQLIGTIFTC 251 300 ENSP00000302851/1-602 VGITTLIQTT VGIRLPLFQA SAFAFLVPAK AILALERWKC PPE------- ENSBTAP00000010823/1-603 VGITTLIQTT LGIRLPLFQA SAFAFLVPAK AILALEKWKC PPE------- BACU004119/1-759 VGITTLIQTT LGIRLPLFQA SAFAFLVPAK AILALDRWKC PPE------- bmy_07877T0/1-677 VGITTLIQTT LGIRLPLFQA SAFAFLVPAK AILALDRWKC PPEGGHISGD ENSTTRP00000003519/1-602 VGITTLIQTT LGIRLPLFQA SAFAFLVPAK AILALERWKC PPE------- 301 350 ENSP00000302851/1-602 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010823/1-603 ---------- ---------- ---------- ---------- ---------- BACU004119/1-759 ---------- ---------- ---------- ---------- ---------- bmy_07877T0/1-677 CTGEGSPRSP EVWATVPCPY PKVPSGQHLY FLSVSVPCAC VRVCVFLSTP ENSTTRP00000003519/1-602 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000302851/1-602 -EEIYGNWSL PLNTSHIWHP RIREVGLHVQ GAIMVSSVVE VVIGLLGLPG ENSBTAP00000010823/1-603 -EEIYGNWSL PLNTSHIWHP RIRE----VQ GAIMVSSMVE VVIGLMGLPG BACU004119/1-759 -EEIYGNWSL PLDTSHIWHP RIRE----VQ GAIMVSSMVE VVIGLMGLPG bmy_07877T0/1-677 PEEIYGNWSL PLNTSHIWHP RIRE----VQ GAIMVSSMVE VVIGLMGLPG ENSTTRP00000003519/1-602 -EEIYGNWSL PLNTSHIWHP RIREVGLHVQ GAIMVSSMVE VVIGLMGLPG 401 450 ENSP00000302851/1-602 ALLNYIGPLT VTPTVSLIGL SVFQAAGDRA GSHWGISACS ILLIILFSQY ENSBTAP00000010823/1-603 ALLSYIGPLT VTPTVSLIGL SVFQAAGDRA GSHWGISACS ILLIVLFSQY BACU004119/1-759 ALLSYIGPLT VTPTVSLIGL SVFQAAGDRA GSHWGISACS ILLIVLFSQY bmy_07877T0/1-677 ALLSYIGPLT VTPTVSLIGL SVFQAAGDRA GSHWGISACS ILLIVLFSQY ENSTTRP00000003519/1-602 ALLSYIGPLT VTPTVSLIGL SVFQAAGDRA GSHWGISACS ILLIVLFSQY 451 500 ENSP00000302851/1-602 LRNLTFLLPV YRWGKGLTLL RIQIFKMFPI MLAIMTVWLL CYVLTLTDVL ENSBTAP00000010823/1-603 LRNLTFLLPV YRWGKGLTLF RIQIFKMFPI VLAIMTVWLL CYVLTLTDML BACU004119/1-759 LRNLTFLLPV YCWGKGLTLF RIQIFKMFPI VLAIMTVWLL CYILTLTDVL bmy_07877T0/1-677 LRNLTFLLPV YCWGKGLTLF RIQIFKMFPI VLAIMTVWLL CYILTLTDVL ENSTTRP00000003519/1-602 LRNLTFLLPV YRWGKGLTLF RIQIFKMFPI VLAIMTVWLL CYILTLTDVL 501 550 ENSP00000302851/1-602 PTDPKAYGFQ ARTDARGDIM AIAPWIRIPY PCQWGLPTVT AAAVLGMFSA ENSBTAP00000010823/1-603 PSDPTAYGFQ ARTDARGDIM AIAPWIRIPY PCQWGLPTVT AAAVLGMFSA BACU004119/1-759 PSDPTAYGFQ ARTDARGDIV AIAPWIRIPY PCQWGLPTVT AAAVLGMFSA bmy_07877T0/1-677 PSDPTAYGFQ ARTDARGDIV AIAPWIRIPY PCQWGLPTVT AAAVLGMFSA ENSTTRP00000003519/1-602 PSDPTAYGFQ ARTDARGDIV AIAPWIRIPY PCQWGLPTVT AAAVLGMFSA 551 600 ENSP00000302851/1-602 TLAGIIESIG DYYACARLAG APPPPVHAIN RGIFTEGICC IIAGLLGTGN ENSBTAP00000010823/1-603 TLAGIIESIG DYYACARLAG APPPPVHAIN RGIFTEGICC IIAGLLGTGN BACU004119/1-759 TLAGIIESIG DYYACARLAG APPPPVHAIN RGIFTEGICC IIAGLLGTGN bmy_07877T0/1-677 TLAGIIESIG DYYACARLAG APPPPVHAIN RGIFTEGICC IIAGLLGTGN ENSTTRP00000003519/1-602 TLAGIIESIG DYYACARLAG APPPPVHAIN RGIFTEGICC IIAGLLGTGN 601 650 ENSP00000302851/1-602 GSTSSSPNIG VLGITKVGSR RVVQYGAAIM LVLGTIGKFT ALFSSLPDPI ENSBTAP00000010823/1-603 GSTSSSPNIG VLGITKVGSR RVVQYGAGIM LILGTIGKFT ALFASLPDPI BACU004119/1-759 GSTSSSPNIG VLGITKVGSR RVVQYGAGIM LVLGTIGKFT ALFASLPDPI bmy_07877T0/1-677 GSTSSSPNIG VLGITKVGSR RVVQYGAGIM LVLGTIGKFT ALFASLPDPI ENSTTRP00000003519/1-602 GSTSSSPNIG VLGITKVGSR RVVQYGAGIM LVLGTIGKFT ALFASLPDPI 651 700 ENSP00000302851/1-602 LGGMFCTLFG MITAVGLSNL QFVDMNSSRN LFVLGFSMFF GLTLPNYLES ENSBTAP00000010823/1-603 LGGMFCTLFG MITAVGLSNL QFVDMNSSRN LFVLGFSMFF GLTLPNYLDS BACU004119/1-759 LGGMFCTLFG MITAVGLSNL QFVDMNSSRN LFVLGFSMFF GLTLPNYLDS bmy_07877T0/1-677 LGGMFCTLFG MITAVGLSNL QFVDMNSSRN LFVLGFSMFF GLTLPNYLDS ENSTTRP00000003519/1-602 LGGMFCTLFG MITAVGLSNL QFVDMNSSRN LFVLGFSMFF GLTLPNYLDS 701 750 ENSP00000302851/1-602 NPGAINTGIL EVDQILIVLL TTEMFVGGCL AFILDNTVPG SPEERGLIQW ENSBTAP00000010823/1-603 NPDVINTGVP EVDQILTVLL TTEMFVGGCL AFILDNTVPG SPEERGLIQW BACU004119/1-759 NPDAINTGSP EVDQILTVLL TTEMFVGGCL AFILDNTVPG SPEERGLIQW bmy_07877T0/1-677 NPDAINTGIP EVDQILTVLL TTEMFVGGCL AFILDNTVPG SPEERGLLQW ENSTTRP00000003519/1-602 NPDAINTGIP EVDQILTVLL TTEMFVGGCL AFILDNTVPG SPEERGLIQW 751 800 ENSP00000302851/1-602 KAGAHANSDM SSSLKSYDFP IGMGIVKRIT FLKYIPICPV FKGFSSSSKD ENSBTAP00000010823/1-603 KAGAHADSEM SSSLKSYDFP IGMSMVKRIA FLKYIPICPV FKGFPSRSKN BACU004119/1-759 KAGAHANSEM STSLKSYDFP FGMSMVKRIA FLKYIPICPV FKGFSSRSKD bmy_07877T0/1-677 KAGAHANSEM STSLKSYDFP IGMSMVKRIA FLKYIPICPV FKGFSSRSKD ENSTTRP00000003519/1-602 KAGAHANSEM STSLKSYDFP IGMSMVKRIA FLKYIPICPV FKGFSSRSKD 801 850 ENSP00000302851/1-602 QIAIPEDTPE NTETASVCTK V ENSBTAP00000010823/1-603 QLPVPEDIPE NTET--VYTK V BACU004119/1-759 QLPVPEDTPQ NTETGSVCTK V bmy_07877T0/1-677 QLPVPEDTPQ NTETGSVCTK V ENSTTRP00000003519/1-602 QLPVPEDTPQ NTETGSVCTK I