KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:15 2014 Check: 00 .. Name: ENSP00000359782/1-279 Len: 281 Check: 614 Weight: 1.00 Name: ENSBTAP00000010825/1-279 Len: 281 Check: 8319 Weight: 1.00 Name: ENSTTRP00000000867/1-279 Len: 281 Check: 9093 Weight: 1.00 Name: bmy_05051T0/1-157 Len: 281 Check: 8551 Weight: 1.00 // 1 50 ENSP00000359782/1-279 MQKIVQTDEI TNTQAFRKGK RKRTETMDSE NANSDMDKGQ RDPYSGNAFL ENSBTAP00000010825/1-279 MQKIFQTEET TDSQALRKGK RKRTEPMDSE NVNSDPDKAQ RDPYSGNAFL ENSTTRP00000000867/1-279 MQKILQTEEI TNTQALXXXX XXXXXXXXXX XXXXXXXXXX RDPYSGNAFL bmy_05051T0/1-157 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000359782/1-279 PGESSSEDEE PLAELSKEEL CAKIKSLKEK LTNTRKENSR LRQSLVMLQ- ENSBTAP00000010825/1-279 PGESSSEDEE PLAELSKEEL CTKIKSLKQK LTNIRKENSR LRQSLVMLQ- ENSTTRP00000000867/1-279 PGESSSEDED PLAELSKEEL CTKIRGLKQK LTNIRKENSR LRQSLVMLQ- bmy_05051T0/1-157 ---------- ---------- ---------- -------MTS IRKVLLFLAI 101 150 ENSP00000359782/1-279 -VLPQAVTQF EELVGMAEAL LKGGGTMSTS ASTLWRATNN SSPDSFASTC ENSBTAP00000010825/1-279 -VLPQAITQF EELVGMAEAL LKGGGTLSTS ASTLWRAANN SSPDSFASTC ENSTTRP00000000867/1-279 -VLPQAVTQF EELVGMAEAL LKGGGTLSTS ASTLWRATNN SSPDSFASTC bmy_05051T0/1-157 LVLPQAVTQF EELVGMAEAL LKGGGTLSTS ASTLWRATNN SSPDSFASTC 151 200 ENSP00000359782/1-279 SNSNSNSSSP VSLKPEEEHQ TDEKQFQIEK WQIARCNKSK PQKFINDLMQ ENSBTAP00000010825/1-279 SNSNSASSSP ISLKAEEDHQ TDEKQFKIEK WQIARCNKSK PQKFINDLMQ ENSTTRP00000000867/1-279 SNSNSNYSSP ISLKTEEEHH VDEKQFKIEK WQIARCNKSK PQKFINDLMQ bmy_05051T0/1-157 SNSNSNSSSP VSLKAEEEHH TDEKQFKIEK WQIARCNKSK PQKFINDLMQ 201 250 ENSP00000359782/1-279 VLYTNEYMAT HSLTGAKSST SRDKAVKPAM NQNEVQEIIG VTKQLFPNTD ENSBTAP00000010825/1-279 VLYTNEYMAT HSLTGAKSST SRDKAVKPAM NQNEVQEIIG ITKQLFPSTD ENSTTRP00000000867/1-279 VLYTNEYMAT HSLTGAKSST SRDKAVKPAM NQNEVQEIIG ITKQLFPNTD bmy_05051T0/1-157 VLYTNEYMAT HSLTGAKSST SRDKAVKPAM NQNEVQEIIG IIVT------ 251 300 ENSP00000359782/1-279 DVSIRRMIGQ KLNNCTKKPN LSKNLNSQDI K ENSBTAP00000010825/1-279 DASIRRMIGQ KLNNCTKKPN LSKTLSSQDI K ENSTTRP00000000867/1-279 DVSIRRMIGQ KLNNCTKKPY LSKNLNSQDI K bmy_05051T0/1-157 ---------- ---------- ---------- -