KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:16 2014 Check: 00 .. Name: ENSP00000272418/1-430 Len: 430 Check: 5958 Weight: 1.00 Name: ENSBTAP00000010843/1-430 Len: 430 Check: 7163 Weight: 1.00 Name: bmy_01841T0/1-351 Len: 430 Check: 990 Weight: 1.00 Name: ENSTTRP00000004674/1-406 Len: 430 Check: 2174 Weight: 1.00 Name: BACU017734/1-365 Len: 430 Check: 6072 Weight: 1.00 // 1 50 ENSP00000272418/1-430 MATAVRAVGC LPVLCSGTAG HLLGRQCSLN TLPAASILAW KSVLGNGHLS ENSBTAP00000010843/1-430 MAAAVRAAGF LPALCGASAG RLWSRQLYLN TFPTASIWAL KAVPSNGPSS bmy_01841T0/1-351 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004674/1-406 MAATVRAAGI LPVLCGAPAG HLWSRQLYLN SFPAASILAL KTVPSNGCLS BACU017734/1-365 ---------- ---------G HLWSRQLYVN SFPTASILAL KTVPSN---- 51 100 ENSP00000272418/1-430 SLGTRDTHPY ASLSRALQTQ CCISSPSHLM SQQYRPYSFF TKLTADELWK ENSBTAP00000010843/1-430 SAGARGRCRS THLGPALQTQ CCTPAPGNVT AQQYRSYSFF TKLTADELWK bmy_01841T0/1-351 ---------- ---------- ---------M GRQYRFYSFF TKLTADELWK ENSTTRP00000004674/1-406 SPGTRDNRHF ISLTRALQTQ CCISSPSNLM GQQYRFYSFF TKLTADELWK BACU017734/1-365 ---------- ---------- ---------- ---------- --VTADELWK 101 150 ENSP00000272418/1-430 GALAETGAGA KKGRGKRTKK KKRKDLNRGQ IIGEGRYGFL WPGLNVPLMK ENSBTAP00000010843/1-430 GALAETGAGA RKGRGKRTKR KRRKDLNRGQ IIGEGRRGFL WPGLNAPLMK bmy_01841T0/1-351 GALAETGART RKGRGKRTKK KKRKDLNRGQ IIGEGRCGFL WPGLNVPLMR ENSTTRP00000004674/1-406 GALAESGAGT RKGRGKRTKK KKRKDLNRGQ IIGEGRYGFL WPGLNVPLMR BACU017734/1-365 GALAESGAGT RKGRGKRTKK KKRKDLNRAQ IIGEGRCGFL WPGLNVPLMR 151 200 ENSP00000272418/1-430 NGAVQTIAQR SKEEQEKVEA DMIQQREEWD RKKKMKVKRE RGWSGNSWGG ENSBTAP00000010843/1-430 SGAIQTITQR SKEEQEKVEA DMVQQREEWD RKRKMKVKRE RGWSGNSWGG bmy_01841T0/1-351 NGAVQTIAQR SKEEQEKVEA HMVRQREEWD WKRKMKVKRE RGWSGNTWGG ENSTTRP00000004674/1-406 NGAVQTIAQR SKEEQEKVEA DMVRQREEWD WKRKMKVKRE RGWSGNTWGG BACU017734/1-365 NGAVQTIAQR SKEEQEKVEA DMVRQREEWE WKRKMKVKRE RGWSGNTWGG 201 250 ENSP00000272418/1-430 ISLGPPDPGP CGETYEDFDT RILEVRNVFT MTAKEGRKKS IRVLVAVGNG ENSBTAP00000010843/1-430 ISLGPPDPGP NGETYDDFDT RILEVRNVFN MTAKEGRKRS VRVLVAVGNG bmy_01841T0/1-351 VGLGPPDPGP SGETYDDFDT RILEVRNVFN MTAKEGRKRS VRVLVAVGNG ENSTTRP00000004674/1-406 VSLGPPDPGP NGETYDDFDT RILEVRNVFN MTAKEGRKRS VRVLVAVGNG BACU017734/1-365 VSLGPPDPGS SGETYDDFDT RILEVRNVFN MTAKEGRKRS VRVLVAVGNG 251 300 ENSP00000272418/1-430 KGAAGFSIGK ATDRMDAFRK AKNRAVHHLH YIERYEDHTI FHDISLRFKR ENSBTAP00000010843/1-430 RGAAGFAIGK ATERADAFRK AKNRAVHYLH YIERYEDHTI YHDISLTFKR bmy_01841T0/1-351 RGAAGFAIGK ATERADAFRK AKNKAVHYLH YIERYADHTI YHDISLTFKR ENSTTRP00000004674/1-406 RGAAGFAIGK ASERADAFRK AKNKAVHYLH YIERYEDHTI YHDISLRFKR BACU017734/1-365 RGAAGFAIGK AAERADAFRK AKNKAVHYLH YIERYEDHTI YHDISLTFKR 301 350 ENSP00000272418/1-430 THIKMKKQPK GYGLRCHRAI ITICRLIGIK DMYAKVSGSI NMLSLTQGLF ENSBTAP00000010843/1-430 THIKMKKQPR GYGLRCHRAI TTICRLIGIK DMYAKVSGSV NMLSLTRGLF bmy_01841T0/1-351 THIKMKKQPR GYGLRCHRAI ITICRLIGIK DMYAKVSGSV NMLNLTWGLF ENSTTRP00000004674/1-406 THIKMKKQTR GYGLRCHRAI ITICRLIGIK DMYAKVSGSV NMLNLTRGLF BACU017734/1-365 THIKMKKQPR GYGLRCHRAI ITICRLIGIK DMYAKVSGSV NMLNLTRGLF 351 400 ENSP00000272418/1-430 RGLSRQETHQ QLADKKGLHV VEIREECGPL PIVVASPRGP LRKDPEPEDE ENSBTAP00000010843/1-430 QGLSRQETHQ QLADKKSLHV VEFREECGPL PIVVASPQGA LRKDPEPEDE bmy_01841T0/1-351 HGLSRQETHQ QLADKKSLHV VEFREECGPL PIVVASPTGA LKKDPQPEDE ENSTTRP00000004674/1-406 HGLSRQETHQ QLADKKSLHV VEFREECGPL PIVVASPKGA LRKDPEPEDE BACU017734/1-365 HGLSRQETHQ QLADKKSLHV VEFREECGPL PIVVASPKGA LRKDPEPEHE 401 450 ENSP00000272418/1-430 VPDVKLDWED VKTAQGMKRS VWSNLKRAAT ENSBTAP00000010843/1-430 VPDIKLDWDD VKAVQGMKRS VWSGLKRAAT bmy_01841T0/1-351 VPDIKLDWEE VKASQGMKRS VWSSLKRAAT ENSTTRP00000004674/1-406 VPNIKL---- ---------- ---------- BACU017734/1-365 VPDIKLDWDE VKAAQGMKRS VWSSLKRAAT