KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:17 2014 Check: 00 .. Name: ENSP00000344967/1-322 Len: 346 Check: 8927 Weight: 1.00 Name: ENSBTAP00000010852/1-299 Len: 346 Check: 5911 Weight: 1.00 Name: ENSTTRP00000000964/1-321 Len: 346 Check: 2070 Weight: 1.00 Name: bmy_10674T0/1-345 Len: 346 Check: 3679 Weight: 1.00 Name: BACU015983/1-300 Len: 346 Check: 8078 Weight: 1.00 // 1 50 ENSP00000344967/1-322 ---------- ---------- ---MLSPLPT GPLEACFSVQ SRTSSPMEPP ENSBTAP00000010852/1-299 ---------- ---------- ---------- ---------- ------MEPP ENSTTRP00000000964/1-321 ---------- ---------- ---MLSP-PT GPLEACFSTQ PRTSGPMEPP bmy_10674T0/1-345 MLVTLRLLKL DEEDFKDISW LSSFLDSELK RPLEACFSAQ PRTSGPMEPP BACU015983/1-300 ---------- ---------- ---------- ---------- ------MEPP 51 100 ENSP00000344967/1-322 IPQSAPLTPN SVMVQPLLDS RMSHSRLQHP LTILPIDQVK TSHVENDYID ENSBTAP00000010852/1-299 IPQSVPLTPS SVMVQPLLDS RTAHSRLQHP LTILPIDQMK TSHVENDYID ENSTTRP00000000964/1-321 IPQSVPLTPS SVMVQPLLDS RMAHGRLQHP LTILPIDQMK TSHVENDYID bmy_10674T0/1-345 IPQSVPLTPS SVMVQPLLDS RMAHGRLQHP LTILPIDQMK TSHVENDYID BACU015983/1-300 IPQSVPLTPS SVMVQPLLDS RMAHGRLQHP LTILPIDQMK TSHVENDYID 101 150 ENSP00000344967/1-322 NPSLALTTGP KRTRGG-APE LAPTPARCDQ DVTHHWISFS GRPSSVSSSS ENSBTAP00000010852/1-299 NPGLAPPSGP KRTRGG-APE LAPTPARCDQ DVTHHWISFS GRPSSVSSSS ENSTTRP00000000964/1-321 NPGLAPPTGP KRTRGA-APE LALTPARCDQ DITHHWISFS GRPSSVSSSS bmy_10674T0/1-345 NPGLAPPTGP KRTRGG-APE LALTPARCDQ DITHHWISFS GRPSSVSSSS BACU015983/1-300 NPGLAPPTGP KRTRGGPAPE LALTPARCDQ DVTHHWISFS GRPSSVSSSS 151 200 ENSP00000344967/1-322 STSSDQRLLD HMAPPPVADQ ASPRAVRIQP KVVHCQPLDL KGPAVPPELD ENSBTAP00000010852/1-299 STSSDQRLLD HMAPPPVADQ ASPRAVRIQP KAIHCKPLDL KGPAGPPELD ENSTTRP00000000964/1-321 STSSDQRLLD HMAPPPVADQ ASPRAVRIQP KAIHCKPLDL KGPAVPPELD bmy_10674T0/1-345 STSSDQRLLD HVAPPPVADQ ASPRAVRIQP KAIHCKPLDL KGPAVPPELD BACU015983/1-300 STSSDQRLLD HMAPPPVADQ ASPRAVRIQP KAIHCKPLDL KGPAVPPELD 201 250 ENSP00000344967/1-322 KHFLLCEACG KCKCKECASP RTLPSCWVCN QECLCSAQTL VNYGTCMCLV ENSBTAP00000010852/1-299 KHFLLCEACG KCKCKECASP RTLPSCWVCN QECLCSAQTL VNYGTCMCLV ENSTTRP00000000964/1-321 KHFLLCEACG KCKCKECASP RTLPSCWVCN QECLCSAQTL VNYSTCMCLV bmy_10674T0/1-345 KHFLLCEACG KCKCKECASP RTLPSCWVCN QECLCSAQTL VNYGTCMCLV BACU015983/1-300 KHFLLCEACG KCKCKECASP RTLPSCWVCN QECLCSAQTL VNYGTCMCLV 251 300 ENSP00000344967/1-322 QGIFYHCTNE DDEGSCADHP CSCSRSNCCA RWSFMGALSV VLPCLLCYLP ENSBTAP00000010852/1-299 QGIFYHCTNE DDEGSCADHP CSCSRSNCCA RWSFMGALSL VLPCLLCYLP ENSTTRP00000000964/1-321 QGVFYHCTNE DDEGSCADHP CSCSRSNCCA RWSFMGALSL VLPCLLCYLP bmy_10674T0/1-345 QGVFYHCTNE DDEGSCADHP CSCSRSNCCA RWSFMGALSL VLPCLLCYLP BACU015983/1-300 QGVFYHCTNE DDEGSCADHP CSCSRSNCCA RWSFMGALSL VLPCLLCYLP 301 350 ENSP00000344967/1-322 ATGCVKLAQR GYDRLRRPGC RCKHTNSVIC KAASGDAKTS RPDKPF ENSBTAP00000010852/1-299 ATGCVKLAQR GYDRLRRPGC RCKHTNSVIC KAAAGDAKAS RPDKPF ENSTTRP00000000964/1-321 ATGCVKLAQR GYDRLRRPGC RCKHTNSVIC KAAAGDAKAS RPDKPF bmy_10674T0/1-345 ATGCVKLAQR GYDRLRRPGC RCKHTNSVIC KAAAGDAKAS RPDKPF BACU015983/1-300 ATGCVKLAQR GYDRLRRPGC RCKHTNSVIC KAAAGDAKAS RPDKPF