KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:17 2014 Check: 00 .. Name: ENSBTAP00000010857/1-237 Len: 245 Check: 1875 Weight: 1.00 Name: BACU014590/1-175 Len: 245 Check: 1938 Weight: 1.00 Name: bmy_05234T0/1-244 Len: 245 Check: 6694 Weight: 1.00 Name: ENSP00000238831/1-244 Len: 245 Check: 6665 Weight: 1.00 Name: ENSTTRP00000001617/1-245 Len: 245 Check: 8124 Weight: 1.00 // 1 50 ENSBTAP00000010857/1-237 -------MMF GPTNVFFKFT QIAETKELSG SIAPPDVKLN LGGDFIKEST BACU014590/1-175 MQPPGPPPAY SPTNGDFTFV SSADAEDLSG SIASPDVKLN LGGDFIKEST bmy_05234T0/1-244 MQPPGPPPAY SPTNGDFTFV SSADAEDLSG SIASPDVKLN LGGDFIKEST ENSP00000238831/1-244 MQPPGPPPAY APTNGDFTFV SSADAEDLSG SIASPDVKLN LGGDFIKEST ENSTTRP00000001617/1-245 MQPPGPPPAY SPTNGDFTFV SSADAEDLSG SIASPDVKLN LGGDFIKEST 51 100 ENSBTAP00000010857/1-237 ATTFLRQRGY GWLLEVEDDD PEDNKPL-LE ELDIDLKDIY YKIRCVLMPM BACU014590/1-175 ATTFLRQRGY GWLLEVEDDD PEDNKPL-LE ELDIDLKDIY YKIRCVLMPM bmy_05234T0/1-244 ATTFLRQRGY GWLLEVEDDD PEDNKPL-LE ELDIDLKDIY YKIRCVLMPM ENSP00000238831/1-244 ATTFLRQRGY GWLLEVEDDD PEDNKPL-LE ELDIDLKDIY YKIRCVLMPM ENSTTRP00000001617/1-245 ATTFLRQRGY GWLLEVEDDD PEDNKPKNNE ELDIDLKDIY YKIRCVLMPM 101 150 ENSBTAP00000010857/1-237 PSLGFNRQVV RDNPDFWGPL AVVLFFSMIS LYGQFRVVSW IITIWIFGSL BACU014590/1-175 PSLGFNRQVV RDNPDFWGPL AVVLFFSMIS LYGQFR---- ---------- bmy_05234T0/1-244 PSLGFNRQVV RDNPDFWGPL AVVLFFSMIS LYGQFRVVSW IITIWIFGSL ENSP00000238831/1-244 PSLGFNRQVV RDNPDFWGPL AVVLFFSMIS LYGQFRVVSW IITIWIFGSL ENSTTRP00000001617/1-245 PSLGFNRQVV RDNPDFWGPL AVVLFFSMIS LYGQFRVVSW IITIWIFGSL 151 200 ENSBTAP00000010857/1-237 TIFLLARVLG GEVAYGQVLG VIGYSLLPLI VIAPILLVVG SFEVVSTLIK BACU014590/1-175 ---------- --VAYGQVLG VIGYSLLPLI VIAPILLVVG SFEVVSTLIK bmy_05234T0/1-244 TIFLLARVLG GEVAYGQVLG VIGYSLLPLI VIAPILLVVG SFEVVSTLIK ENSP00000238831/1-244 TIFLLARVLG GEVAYGQVLG VIGYSLLPLI VIAPVLLVVG SFEVVSTLIK ENSTTRP00000001617/1-245 TIFLLARVLG GEVAYGQVLG VIGYSLLPLI VIAPILLVVG SFEVVSTLIK 201 250 ENSBTAP00000010857/1-237 LFGVFWAAYS AASLLVGEEF KTKKPLLIYP IFLLYIYFLS LYTGV BACU014590/1-175 FI-------- ---------- ---------- ---------- ----- bmy_05234T0/1-244 LFGVFWAAYS AASLLVGEEF KTKKPLLIYP IFLLYIYFLS LYTGV ENSP00000238831/1-244 LFGVFWAAYS AASLLVGEEF KTKKPLLIYP IFLLYIYFLS LYTGV ENSTTRP00000001617/1-245 LFGVFWAAYS AASLLVGEEF KTKKPLLIYP IFLLYIYFLS LYTGV