KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:20 2014 Check: 00 .. Name: ENSTTRP00000010936/1-143 Len: 242 Check: 22 Weight: 1.00 Name: ENSP00000397453/1-191 Len: 242 Check: 746 Weight: 1.00 Name: ENSBTAP00000010872/1-151 Len: 242 Check: 1963 Weight: 1.00 Name: bmy_02180T0/1-180 Len: 242 Check: 6143 Weight: 1.00 Name: BACU011152/1-133 Len: 242 Check: 8968 Weight: 1.00 // 1 50 ENSTTRP00000010936/1-143 ---------- ---------- ---------- ---------- -----KRLQK ENSP00000397453/1-191 MLSPRGVTRA RQLLPLRLWP RRSWGDGSIM ASMQTTGRRV EVWFPKRLQK ENSBTAP00000010872/1-151 ---------- ---------- ---------M ASMQ------ -----KRLQK bmy_02180T0/1-180 ---------- ---------- ---------- ---------- ---------- BACU011152/1-133 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010936/1-143 ELLALQNDPP PGMTLNEKSV QNSITQWIVD MEGAPGTLYE GEKFQLLFKF ENSP00000397453/1-191 ELLALQNDPP PGMTLNEKSV QNSITQWIVD MEGAPGTLYE GEKFQLLFKF ENSBTAP00000010872/1-151 ELLALQNDPP PGMTLNEKSV QNSITQWIVD MEGAPGTLYE GEKFQLLFKF bmy_02180T0/1-180 ---------- --MTLNEKSV QNSITQWIVD MEGAPGTLYE GEKFQLLFKF BACU011152/1-133 ---------- --MTLNEKSV QNSITQWIVD MEGAPGTLYE GEKFQLLFKF 101 150 ENSTTRP00000010936/1-143 SSRYPFDSPQ VMFTGENIPV HPHVYSNGHI CLSILTDYCS LALSLHSVCL ENSP00000397453/1-191 SSRYPFDSPQ VMFTGENIPV HPHVYSNGHI CLSILTEDWS PALSVQSVCL ENSBTAP00000010872/1-151 SSRYPFDSPQ VMFTGENIPV HPHVYSNGHI CLSILTEDWS PALSVQSVCL bmy_02180T0/1-180 SSRYPFDSPQ VMFTGENIPV HPHVYSNGHI CLSILTEDWS PALSVQSVCL BACU011152/1-133 SSRYPFDSPQ VMFTGENIPV HPHVYSNGHI CLSILTEDWS PALSVQSVCL 151 200 ENSTTRP00000010936/1-143 STIIMLSSCK -KRRPPDNSF YVRTCNKNPK KTKWWYH--- ---------- ENSP00000397453/1-191 SIISMLSSCK EKRRPPDNSF YVRTCNKNPK KTKWWYH--- ---------- ENSBTAP00000010872/1-151 SIISMLSSCK EKRRPPDNSF YVRTCNKNPK KTKWWYH--- ---------- bmy_02180T0/1-180 SIISMLSSCK EKRRPPDNSF YVRTCNKNPK KTKWWYHVFW FERLYICLLG BACU011152/1-133 SIISMLSSCK EKMILVDATV IILLAEDSPT EK-------- ---------- 201 250 ENSTTRP00000010936/1-143 ---------- ---DG----- ---------- ---------- -- ENSP00000397453/1-191 ---------- ---DDTC--- ---------- ---------- -- ENSBTAP00000010872/1-151 ---------- ---DDTC--- ---------- ---------- -- bmy_02180T0/1-180 KKREYIIDVM ILVDATVIIL LAEDSPTEKM STLIIQSLNF NL BACU011152/1-133 ---------- ---------- ---------M STLIIQSLNF NL