KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:21 2014 Check: 00 .. Name: ENSBTAP00000010892/1-425 Len: 514 Check: 3608 Weight: 1.00 Name: bmy_13454T0/1-464 Len: 514 Check: 6406 Weight: 1.00 Name: BACU011161/1-384 Len: 514 Check: 7540 Weight: 1.00 Name: ENSTTRP00000003464/1-406 Len: 514 Check: 9399 Weight: 1.00 // 1 50 ENSBTAP00000010892/1-425 ---------- ---------- ---------- MQILYNSNDS SVPETTSMNT bmy_13454T0/1-464 ---------M EMANYSEVLD PTYTTLEFET MQILYNSNDS SVPETTSMNT BACU011161/1-384 MRVSEPILDM EMANYSEVLD PTYTTLEFET MQILYNSN-- ---------- ENSTTRP00000003464/1-406 ---------M EMANYSEVLD PTYTTLEFET MQILYNSNDS SVPETTSMNT 51 100 ENSBTAP00000010892/1-425 ADNGVNCLCA ICGDRATGKH YGASSCDGCK GFFRRSIRKS HVYSCRFSRQ bmy_13454T0/1-464 TDNGVNCLCA ICGDRATGKH YGASSCDGCK GFFRRSIRKS HVYSCRYLKC BACU011161/1-384 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003464/1-406 TDNGVNCLCA ICGDRATGKH YGASSCDGCK GFFRRSIRKS HVYSCXXXXX 101 150 ENSBTAP00000010892/1-425 CVVDKDKRNQ CRYCRLRKCF RAGMKKEAVQ NERDRISTRR STFDGSNIPS bmy_13454T0/1-464 SFPE------ ---------- -------AVQ NERDRISTRR STFDGSNIPS BACU011161/1-384 ---------- ---------- -------AVQ NERDRISTRR STFDGSNIPS ENSTTRP00000003464/1-406 XXXXKDKRNQ CRYCRLRKCF RAGMKKEAVQ NERDRISTRR STFDGSNIPS 151 200 ENSBTAP00000010892/1-425 INTLAQAEVR SRQIS----V SSPGASADIN VKKIASIGDV CESMKQQLLV bmy_13454T0/1-464 INTLAQAEVR SRQIS----V SSPGASTDIN IKKIASIGDV CESMKQQLLV BACU011161/1-384 INTLAQAEVR SRQISVSSPV SSPGASTDIN IKKIASIGDV CESMKQQLLV ENSTTRP00000003464/1-406 INTLAQAEVR SRQIS----V SSPGVSTDIN IKKIASIGDV CESMKQQLLV 201 250 ENSBTAP00000010892/1-425 LVEWAKYIPA FCELPLDDQV ALLRAHAGEH LLLGATKRSM MYKDILLL-- bmy_13454T0/1-464 LVEWAKYIPA FCELPLDDQV ALLRAHAGEH LLLGATKRSM VYKDILLLGI BACU011161/1-384 LVEWAKYIPA FCELPLDDQV ALLRAHAGEH LLLGATKRSM VYKDILLL-- ENSTTRP00000003464/1-406 LVEWAKYIPA FCELPLDDQV ALLRAHAGEH LLLGATKRSM VYKDILLL-- 251 300 ENSBTAP00000010892/1-425 ---------- ---------- ---------- ---------G NNYVIHRNSC bmy_13454T0/1-464 RRHCQMVLSL HKLDLVGQVL TQALFFLAVN SGKFRVDVQG NNYIIHRNSC BACU011161/1-384 ---------- ---------- ---------- ---------G NNYIIHRNSC ENSTTRP00000003464/1-406 ---------- ---------- ---------- ---------G NNYIIHRNSC 301 350 ENSBTAP00000010892/1-425 EVEISRVANR VLDELVRPFQ EIQIDDNEYA CLKAIVFFDP DAKGLSDPVK bmy_13454T0/1-464 EVEISRVANR VLDELVRPFQ EIQIDDNEYA CLKAIVFFDP DAKGLSDPVK BACU011161/1-384 EVEISRVANR VLDELVRPFQ EIQIDDNEYA CLKAIVFFDP DAKGLSDPVK ENSTTRP00000003464/1-406 EVEISRVANR VLDELVRPFQ EIQIDDNEYA CLKAIVFFDP DAKGLSDPVK 351 400 ENSBTAP00000010892/1-425 IKNMRFQVQL SLEDYINDRQ YDSRGRFGEL LLLLPTLQSI TWQMIEQIQF bmy_13454T0/1-464 IKNMRFQVQL SLEDYINDRQ YDSRGRFGEL LLLLPTLQSI TWQMIEQIQF BACU011161/1-384 IKNMRFQVQL SLEDYINDRQ YDSRGRFGEL LLLLPTLQSV TWQMIEQIQF ENSTTRP00000003464/1-406 IKNMRFQVQL SLEDYINDRQ YDSRGRFGEL LLLLPTLQSI TWQMIEQIQF 401 450 ENSBTAP00000010892/1-425 VKLFGMVKID NLLQEMLLGG ASTEPNHLHH PMHPHLSQDP LTGQTILLGS bmy_13454T0/1-464 VKLFGMVKID NLLQEMLLGG ASSEANHLHH PMHPHLSQDP LTGQTILLGP BACU011161/1-384 VKLFGMVKID NLLQEMLLGG ASNEANHLHH PMHPHLSQDP LTGQTILLGP ENSTTRP00000003464/1-406 VKLFGMVKID NLLQEMLLGG ASSEANHLHH PMHPHLSQDP LTGQTILLGP 451 500 ENSBTAP00000010892/1-425 MSTLVHTDQI ---------- ----STPETP LPSPPQGSGQ EPYKIAANQA bmy_13454T0/1-464 MSTLAHTDQI ---------- ----STPETP LPSPPQGSGQ EPYKIVANQA BACU011161/1-384 MSTLVHTDQI CDCHHCIQFS DSFLATPETP LPSPPQGSGQ EPYKIVANQA ENSTTRP00000003464/1-406 MSTLVHTDQI ---------- ---------- ---------- ---------- 501 550 ENSBTAP00000010892/1-425 SVISHQSLSK QKQL bmy_13454T0/1-464 SVISHQPLSK QKQL BACU011161/1-384 SVISHQPLSK QKQL ENSTTRP00000003464/1-406 ---------- ----