KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:22 2014 Check: 00 .. Name: ENSP00000433488/1-82 Len: 452 Check: 1497 Weight: 1.00 Name: ENSBTAP00000010899/1-451 Len: 452 Check: 2045 Weight: 1.00 Name: ENSTTRP00000005278/1-422 Len: 452 Check: 9013 Weight: 1.00 Name: bmy_07372T0/1-353 Len: 452 Check: 6898 Weight: 1.00 Name: BACU010173/1-419 Len: 452 Check: 5562 Weight: 1.00 // 1 50 ENSP00000433488/1-82 MDGTIKEALS VVSDDQSLFD SAYGAAAHLP KADMTASGSP DYGQPHKINP ENSBTAP00000010899/1-451 -DGIAHEALS VVSDDQSLFD SAYGAAAHLP KADMTASGSP DYGQPHKINP ENSTTRP00000005278/1-422 ------EALS VVSDDQSLFD SAYGPAAHLP KADMTASGSP DYGQPHKINP bmy_07372T0/1-353 ---------- ---------- ---------- ---------- ---------- BACU010173/1-419 ---------- ---------- ---------- ---MTASGSP DYGQPHKINP 51 100 ENSP00000433488/1-82 LPPQQEWINQ PVRVNVKREY DHMNGSR--- ---------- ---------- ENSBTAP00000010899/1-451 LPPQQEWMNQ PVRVNVKREY DHMNGSRESP VDCSVSKCGK LVGGGESNTM ENSTTRP00000005278/1-422 LPPQQEWMNQ PVRVSVKREY DHMNGSRESP VDCSVSKCGK LVGGGESNAM bmy_07372T0/1-353 ---------- ---------- ---------- ---------- ---------M BACU010173/1-419 LPPQQEWMNQ PVRVSVKREY DHMNGSRESP VDCSVSKCGK LVGGGESNAM 101 150 ENSP00000433488/1-82 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010899/1-451 SYTSYVDEKN GPPPPNMTTN ERRVIVPADP TLWTQEHVRQ WLEWAIKEYG ENSTTRP00000005278/1-422 SYNSYMDEKN GPPPPNMTTN ERRVIVPA-- ---------- ---------- bmy_07372T0/1-353 SYNSYMDEKN GPPPPNMTTN ERRVIVPADP TLWTQEHVRQ WLEWAIKEYG BACU010173/1-419 SYNSYMDEKN GPPPPNMTTN ERRVIVPADP TLWTQEHVRQ WLEWAIKEYG 151 200 ENSP00000433488/1-82 ---------- ----RQL--- ---------- ---------- ---------- ENSBTAP00000010899/1-451 LMEIDTSFFQ NMDGKELCKL NKEDFLRATS LYNTEVLLSH LTYLRESSLL ENSTTRP00000005278/1-422 -MERDKSFFQ NMDGKELCKL NKEDFLRATS LYNTEVLLSH -SYLRESSLL bmy_07372T0/1-353 LMEIDTSFFQ NMDGKELCKL NKEDILRATS LYNTEVLLSH LSYLRESSLL BACU010173/1-419 LMEIDTSFFQ NMDGKELCKL NKEDILRATS LYNTEVLLSH LSYLRESSLL 201 250 ENSP00000433488/1-82 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010899/1-451 PYNTTSHTDP SSRLNVKEDP SYDSVRRGGW GSNMNSGLNK SPPLAGAQTM ENSTTRP00000005278/1-422 AYNTTSHTDP SSRLNVKEDP SYDSVRRGGW GNNMNSGLNK SPPLAGAQTM bmy_07372T0/1-353 AYNTTSHTDP SSRLNVKEDP SYDSVRRGGW GNNMNSGLNK SPPLAGAQTM BACU010173/1-419 AYNTTSHTDP SSRLNVKEDP SYDSVRRGGW GNNMNSGLNK SPPLAGAQTM 251 300 ENSP00000433488/1-82 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010899/1-451 SKNTEQRPQP DPYQILGPTS SRLANPGSGQ IQLWQFLLEL LSDSANASCI ENSTTRP00000005278/1-422 SKNTEQRPQP DPYQILGPTS SRLANPGSGQ IQLWQFLLEL LSDSANASCI bmy_07372T0/1-353 SKNTEQRPQP DPYQILGPTS SRLANPGSGQ IQLWQFLLEL LSDSANASCI BACU010173/1-419 SKNTEQRPQP DPYQILGPTS SRLANPGSGQ IQLWQFLLEL LSDSANASCI 301 350 ENSP00000433488/1-82 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010899/1-451 TWEGTNGEFK MTDPDEVARR WGERKSKPNM NYDKLSRALR YYYDKNIMTK ENSTTRP00000005278/1-422 TWEGTNGEFK MTDPDEVARR WGERKSKPNM NYDKLSRALR YYYDKNIMTK bmy_07372T0/1-353 TWEGTNGEFK MTDPDEVARR WGERKSKPNM NYDKLSRALR YYYDKNIMTK BACU010173/1-419 TWEGTNGEFK MTDPDEVARR WGERKSKPNM NYDKLSRALR YYYDKNIMTK 351 400 ENSP00000433488/1-82 ---------- ---------- PH-------- ---------- ---------- ENSBTAP00000010899/1-451 VHGKRYAYKF DFHGIAQALQ PHPTESSMYK YPSDISYVPS YHTHQQKVNF ENSTTRP00000005278/1-422 VHGKRYAYKF DFHGIAQALQ PHPTESSMYK YPSDISYMPS YHTHQQKVNF bmy_07372T0/1-353 VHGKRYAYKF DFHGIAQALQ PHPTESSMYK YPSDISYMPS YHTHPQKVNF BACU010173/1-419 VHGKRYAYKF DFHGIAQALQ PHPTESSMYK YPSDISYMPS YHTHPQKVNF 401 450 ENSP00000433488/1-82 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000010899/1-451 VPPHPSSMPV TSSSFFGAAS QYWTSPTGGI YPNPNVPRHP NTHVPSHLGS ENSTTRP00000005278/1-422 VPPPPSSMPV TSSSLFGAAS QYWTSPTGGI YPNPNVPRHP NTHVPSHLGS bmy_07372T0/1-353 VPPPPSSMPV TSSSLFGAAS QYWTSPTGGI YPNPNVPRHP NTHVPSHLGS BACU010173/1-419 VPPPPSSMPV TSSSLFGAAS QYWTSPTGGI YPNPNVPRHP NTHVPSHLGS 451 500 ENSP00000433488/1-82 -- ENSBTAP00000010899/1-451 YY ENSTTRP00000005278/1-422 YY bmy_07372T0/1-353 YY BACU010173/1-419 YY