KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:27 2014 Check: 00 .. Name: bmy_21947T0/1-263 Len: 311 Check: 4237 Weight: 1.00 Name: ENSTTRP00000011258/1-310 Len: 311 Check: 5298 Weight: 1.00 Name: ENSP00000328133/1-311 Len: 311 Check: 5798 Weight: 1.00 Name: ENSBTAP00000010919/1-305 Len: 311 Check: 6385 Weight: 1.00 // 1 50 bmy_21947T0/1-263 ---------- -MKHVLTW-S PVIVP----- ---------- ---------- ENSTTRP00000011258/1-310 TETLTMVLEE IETSLIMWFS YALIPCLLVX XXXXXXXXXX XXXXXXXXXX ENSP00000328133/1-311 MQTFTMVLEE IWTSLFMWFF YALIPCLLTD EVAILPAPQN LSVLSTNMKH ENSBTAP00000010919/1-305 -----MVLEE IKTSLIMWFS YALIPCLFVD GVAVLPAPQN LSVQSTNMKH 51 100 bmy_21947T0/1-263 ---------- EEIIHYSVEY QGEYESLYMS HIWIPSSWCS PTQGPECDIT ENSTTRP00000011258/1-310 XXXXXXXXXX XXXXXXXXXX XXEYESLYMS HIWIPSSWCS PTQEPECDIT ENSP00000328133/1-311 LLMWSPVIAP GETVYYSVEY QGEYESLYTS HIWIPSSWCS LTEGPECDVT ENSBTAP00000010919/1-305 VLTWSPVTVP EEIVHYSVEY QGEYESLYTS HIWIPSIWCS PTQRPECDIT 101 150 bmy_21947T0/1-263 DDITATVPYI LRVRATLGSL TSAWSTLKHP FNRNSTILTP PGMEITKDGF ENSTTRP00000011258/1-310 DDITATVPYS LRVRATLGSL TSAWSTLKHP FNRNSTILTP PGMEITKDGF ENSP00000328133/1-311 DDITATVPYN LRVRATLGSQ TSAWSILKHP FNRNSTILTR PGMEITKDGF ENSBTAP00000010919/1-305 EDITATVSYS LRVRATLGSL TSTWSTLKHR FNQNSTILTP PGMEITMDGF 151 200 bmy_21947T0/1-263 HLVIKLEDLG PQFEFFVAYW KREPGAKEHV KMVRHGGILV HLETMEPGAA ENSTTRP00000011258/1-310 HLVIKLEDLG PQFEFFVAYW KREPGAKEHV KMVRRGGIPV HLETMEPGAA ENSP00000328133/1-311 HLVIELEDLG PQFEFLVAYW RREPGAEEHV KMVRSGGIPV HLETMEPGAA ENSBTAP00000010919/1-305 HLLIKLEDLG PHFEFFVSYW RREPGAKEHI KVVRPGVLPV YLETVEPGAA 201 250 bmy_21947T0/1-263 HCVKVRTFVK AIGRHSAFSQ TECVKVQGET LPLALALFSF VGFMLILVAV ENSTTRP00000011258/1-310 HCVKVRTFVK AIGRHSAFSK TECVKVQGET LPLALALFSF VGFMLILVVV ENSP00000328133/1-311 YCVKAQTFVK AIGRYSAFSQ TECVEVQGEA IPLVLALFAF VGFMLILVVV ENSBTAP00000010919/1-305 YCVKARTFVK AIGRHSAFSP TECVKVQGEA LPLALALFAF VGFMLILVVA 251 300 bmy_21947T0/1-263 PVSVWKMGRL LRHSCCPAVM LPDTLKITNS PQKLISCRRE EVEACVAAGL ENSTTRP00000011258/1-310 PLSIWKMGRL LQHSCCPVVM LPDTLKITSS PQKLISCRRE EVEACVVAGL ENSP00000328133/1-311 PLFVWKMGRL LQYSCCPVVV LPDTLKITNS PQKLISCRRE EVDACATAVM ENSBTAP00000010919/1-305 LLSVWKMGRL LRHSCCPVVM LPDTLKITNS PQKLISCRKE EVEACVTSGL 301 350 bmy_21947T0/1-263 SSEELLRAWI - ENSTTRP00000011258/1-310 SSEELLRAWI - ENSP00000328133/1-311 SPEELLRAWI S ENSBTAP00000010919/1-305 SSEELLKAWI -