KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:37 2014 Check: 00 .. Name: ENSP00000362578/1-485 Len: 487 Check: 1405 Weight: 1.00 Name: ENSTTRP00000003788/1-450 Len: 487 Check: 6423 Weight: 1.00 Name: ENSBTAP00000010959/1-487 Len: 487 Check: 7694 Weight: 1.00 Name: bmy_05872T0/1-408 Len: 487 Check: 5526 Weight: 1.00 Name: BACU018020/1-486 Len: 487 Check: 6503 Weight: 1.00 // 1 50 ENSP00000362578/1-485 MGEPGFFVTG DRAGGRSWCL RRVGMSAGWL LLEDGCEVTV GRGFGVTYQL ENSTTRP00000003788/1-450 ---------- ---------- ---------- -------VTV GRGFGVTYQL ENSBTAP00000010959/1-487 MGDPGSLVTE GRAGERSWCL RRVGMNTEWL LLEDGNEVTV GRGFGVTYQL bmy_05872T0/1-408 ---------- ---------- ---------- ---------- ---------- BACU018020/1-486 MGDPGSLVTE GRAGDRSWCL RRVGMNAEWL LLEDGNEVTV GRGFGVTYQL 51 100 ENSP00000362578/1-485 VSKICPLMIS RNHCVLKQNP EGQWTIMDNK SLNGVWLNRA RLEPLRVYSI ENSTTRP00000003788/1-450 VSKICPLMIS RNHCILKQNA EGQWTIMDNK SLNGVWLNRE RLEPLKVYSI ENSBTAP00000010959/1-487 VSKICPLMIS RNHCILKQNA EGQWTIKDNK SLNGVWLNRE RLEPLKVYSI bmy_05872T0/1-408 ---------- ---------- ---------Q SLNGVWLNRE RLEPLKVYSI BACU018020/1-486 ISKICPLMIS RNHCILKQNA AGQWTIMDKK SLNGVWLNRE RLEPLKVYSI 101 150 ENSP00000362578/1-485 HQGDYIQLGV PLENKENAEY EYEVTEEDWE TIYPCLSPKN DQMIEKNKEL ENSTTRP00000003788/1-450 HNGDHIQLGV PLENKENAEY EYEVTEEDWE RIYPCLSPKS DQMMEKNKGL ENSBTAP00000010959/1-487 HKGDHIQLGV PLENKENAEY EYEVTEEDWE RIYPCLSPKS DQMMEKNKGL bmy_05872T0/1-408 HNGDHIQLGV PLENKENAEY EYEVTEEDWE RIYPCLSPKS DQMMEKNKGL BACU018020/1-486 HNGDHIQLGV PLENKENAEY EYEVTEEDWE KIYPCLSPKN DQMMVKNKGL 151 200 ENSP00000362578/1-485 RTKRKFSLDE LAGPGAEGPS NLKSKINKVS CESGQPVKSQ GKGEVASTPS ENSTTRP00000003788/1-450 RAKRKFSLNE LEGSGAEGPS NLKSKISKVS CEPGQPVKSH GKGEVASQPS ENSBTAP00000010959/1-487 RTKRKFSLDE LEGSGAEGPS NLKSKISKLS CEPGQQVKSH GKGKVASQPS bmy_05872T0/1-408 RTKRKFSLNE LEGSGAEGPS NLKSKISKVS CESGQPVKSH GKGEVASQPS BACU018020/1-486 RTKRKFSLNE LEGSGAEGPS NLKSKISKVS CESGQPVKSH GKGEVASQPS 201 250 ENSP00000362578/1-485 DNLDPKLTAL EPS-KTTGAP IYPGFPKVTE VHH-EQKASN SSASQRSLQM ENSTTRP00000003788/1-450 EYLDPKLTSL QLSGKTTGAH VDPGPAKVVE LHYKKQKASN PSASQSRLEL ENSBTAP00000010959/1-487 EYLDPKLTSF EPSVKTTGAH VNPGPAKVIE LLRKKKKASN PSASQSSLEL bmy_05872T0/1-408 EYLDPTLTSL QLSGKTTGAH VYPGPAKVVE LHYKKQKASN PSASQSSLEL BACU018020/1-486 EYLDPTLTSL QLSGKTTGAH VYPGPAKVVE LHYKKQKASN PSASQSSLEL 251 300 ENSP00000362578/1-485 FKVTMSRILR LKIQMQEKHE AVMNVKKQTQ KGNSKKVVQM EQELQDLQSQ ENSTTRP00000003788/1-450 FKVTMSRILK LKTQLQEKQV AVLNVKKQTQ KGNSKKIVKM EQELQDLQSQ ENSBTAP00000010959/1-487 FKVTMSRILM LKTQMQEKQV AVLNVKKQTK KGSSKKIVKM EQELQDLQSQ bmy_05872T0/1-408 FKVTMSRILK LKTQMQEKQV AVLNVKKQTQ KGNSKKIVKM EQELQDLQSQ BACU018020/1-486 FKVTMSRILK LKTQMQEKQV AVLNVKKQTQ KGNSKKIVKM EQELQDLQSQ 301 350 ENSP00000362578/1-485 LCAEQAQQQA RVEQLEKTFQ EEEQHLQGLE IAQGEKDLKQ QLAQALQEHW ENSTTRP00000003788/1-450 LCEEQAQQQA RVEQLEKTFQ EEQQHLQRLE KEQGEEDLKQ QLAQTLQEHR ENSBTAP00000010959/1-487 LCAEQAQQQA RVEQLEKTIQ EEQQHLEGLE KEEGEEDLKQ QLAQALQEYR bmy_05872T0/1-408 LCAEQAQQQA RVEQLEKTFQ EEQQHLQGLE KEQGEEDLKQ QLAQALQEHR BACU018020/1-486 LCAEQAQQQA RVEQLEKTFQ EEQQHLQGLE KEQGEEDLKQ QLAQALQEHR 351 400 ENSP00000362578/1-485 ALMEELNRSK KDFEAIIQAK NKELEQTKEE KEKMQAQKEE VLSHMNDVLE ENSTTRP00000003788/1-450 ALMEELNRSK KDFEAIIQAK NKELEQTKXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000010959/1-487 SLVEELNRSK KNFEAIIQAK DKELEQTKEE KEKVQAQKEE VLSHMNDVLE bmy_05872T0/1-408 ALMEQLNRSK KDFEAIIQAK NKELEQTKEE KEKVQAQKEE VLSHVNDVLE BACU018020/1-486 ALMEQLNRSK KDFEAIIQAK NKELEQTKEE KEKVQAQKEE VLSHVNDVLE 401 450 ENSP00000362578/1-485 NELQCIICSE YFIEAVTLNC AHSFCSYCIN EWMKRKIECP ICRKDIKSKT ENSTTRP00000003788/1-450 XXXXXXXXXX XXXXAVTLNC AHSFCSYCIS EWMKRKIECP ICRKDIKSKT ENSBTAP00000010959/1-487 NELQCIICSE YFVEAVTLNC AHSFCSYCIN EWMKRKVECP ICRKDIKSKT bmy_05872T0/1-408 NELQCIICSE YFIEAVTLNC AHSFCSYCIS EWMKRKIECP ICRKDIKSKT BACU018020/1-486 NELQCIICSE YFIEAVTLNC AHSFCSYCIS EWMKRKIECP ICRKDIKSKT 451 500 ENSP00000362578/1-485 YSLVLDNCIN KMVNNLSSEV KERRIVLIRE RKAKRLF ENSTTRP00000003788/1-450 HSLVLDNCIN KMVDNLSSEV KERRIVLIRE RKAKRLS ENSBTAP00000010959/1-487 RSLVLDNCIS KMVDNLNSEV KERRIVLIRE RKGKRLF bmy_05872T0/1-408 HSLVLDNCIN KMVDNLSSEV KERRIVLIRE RKAKRLS BACU018020/1-486 HSLVLDNCIN KMVDNLSSEV KERRIVLIRE RKGEWV-