KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:38 2014 Check: 00 .. Name: ENSP00000362555/1-732 Len: 737 Check: 9249 Weight: 1.00 Name: ENSBTAP00000010969/1-732 Len: 737 Check: 7718 Weight: 1.00 Name: BACU009635/1-480 Len: 737 Check: 7301 Weight: 1.00 Name: bmy_11812T0/1-596 Len: 737 Check: 642 Weight: 1.00 Name: ENSTTRP00000008522/1-521 Len: 737 Check: 7064 Weight: 1.00 // 1 50 ENSP00000362555/1-732 MGSEKDSESP RSTSLHAAAP DPKCRSGGRR RRLTLHSVFS ASARGRRARA ENSBTAP00000010969/1-732 MGSEKDSESP RSTSLHAAAP DPKCRSGGRR RRLTFHSVFS SSARGRRARA BACU009635/1-480 ---------- ---------- ---------- ---------- ---------- bmy_11812T0/1-596 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008522/1-521 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362555/1-732 KPQAEPPPPA AQPPPAPAPA AAQGPPPEAL PAEPAAEAEA EAAAAAAEPG ENSBTAP00000010969/1-732 KPQAEPPPPA APPP----PP AXQASPPEAL PAEPAAEAEA EAAATVG-PG BACU009635/1-480 ---------- ---------- ---------- ---------- ---------- bmy_11812T0/1-596 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008522/1-521 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000362555/1-732 FDDEEAAEGG GPGAEEVECP LCLVRLPPER APRLLSCPHR SCRDCLRHYL ENSBTAP00000010969/1-732 LDDEEAAEGG GSGPEEVECP LCLVRLPPER APRLLSCPHR SCRDCLRHYL BACU009635/1-480 ---------- ---------- ---------- ---------- ---------- bmy_11812T0/1-596 ---------- ---------- ---------- ------CPHR SCRDCLRHYL ENSTTRP00000008522/1-521 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000362555/1-732 RLEISESRVP ISCPECSERL NPHDIRLLLA DPPLMHKYEE FMLRRYLASD ENSBTAP00000010969/1-732 RLEISESRVP ISCPECSERL NPHDIRLLLA DPPLMHKYEE FMLRRYLASD BACU009635/1-480 ---------- ---------- ---------- ---------- ---------- bmy_11812T0/1-596 RLEISESRVP ISCPECSERL NPHDIRLLLA DPPLMHKYEE FMLRRYLASD ENSTTRP00000008522/1-521 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000362555/1-732 PDCRWCPAPD CGYAVIAYGC ASCPKLTCER EGCQTEFCYH CKQIWHPNQT ENSBTAP00000010969/1-732 PDCRWCPAPD CGYAVIAYGC ASCPKLTCER EGCQTEFCYH CKQIWHPNQT BACU009635/1-480 ---------- ---------- ---------- ---------- ---------- bmy_11812T0/1-596 PDCRWCPAPD CGYAVIAYGC ASCPKLTCER EGCQTEFCYH CKQIWHPNQT ENSTTRP00000008522/1-521 ---------- --YAVIAYGC ASCPKLTCER EGCQTEFCYH CKQIWHPNQT 251 300 ENSP00000362555/1-732 CDMARQQRAQ TLRVRTKHTS GLSYGQESGP ADDIKPCPRC SAYIIKMNDG ENSBTAP00000010969/1-732 CDMARQQRAQ TLRVRTKHTS GLSYGQESGP ADDIKPCPRC SAYIIKMNDG BACU009635/1-480 --MARQQRAQ TLRVRTKHTS GLSYGQESGP -DDIKPCPRC SAYIIKMNDG bmy_11812T0/1-596 CDMARQQRAQ TLRVRTKHTS GLSYGQESGP -DDIKPCPRC SAYIIKMNDG ENSTTRP00000008522/1-521 CDMARQQRAQ TLRVRTKHTS GLSYGQESGP ADDIKPCPRC SAYIIKMNDG 301 350 ENSP00000362555/1-732 SCNHMTCAVC GCEFCWLCMK EISDLHYLSP SGCTFWGKKP WSRKKKILWQ ENSBTAP00000010969/1-732 SCNHMTCAVC GCEFCWLCMK EISDLHYLSP SGCTFWGKKP WSRKKKILWQ BACU009635/1-480 SCNHMTCAVC GCEFCWLCMK EISDLHYLSP SGCTFWGKKP WSRKKKILWQ bmy_11812T0/1-596 SCNHMTCAVC GCEFCWLCMK EISDLHYLSP SGCTFWGKKP WSRKKKILWQ ENSTTRP00000008522/1-521 SCNHMTCAVC GCEFCWLCMK EISDLHYLSP SGCTFWGKKP WSRKKKILWQ 351 400 ENSP00000362555/1-732 LGTLIGAPVG ISLIAGIAIP AMVIGIPVYV GRKIHSRYEG RKTSKHKRNL ENSBTAP00000010969/1-732 LGTLIGAPVG ISLIAGIAIP AMVIGIPVYV GRKIHSRYEG RKTSKHKRNL BACU009635/1-480 LGTLIGAPVG ISLIAGIAIP AMVIGIPVYV GRKIHSRYEG RKTSKHKRNL bmy_11812T0/1-596 LGTLIGAPVG ISLIAGIAIP AMVIGIPVYV GRKIHSRYEG RKTSKHKRNL ENSTTRP00000008522/1-521 LGTLIGAPVG ISLIAGIAIP AMVIGIPVYV GRKIHSRYEG RKTSKHKRNL 401 450 ENSP00000362555/1-732 AITGGVTLSV IASPVIAAVS VGIGVPIMLA YVYGVVPISL CRGGGCGVST ENSBTAP00000010969/1-732 AITGGVTLSV IASPVIAAVS VGIGVPIMLA YVYGVVPISL CRGGGCGVST BACU009635/1-480 AITGGVTLSV IASPVIAAVS VGIGVPIMLA YVYGVVPISL CRGGGCGVST bmy_11812T0/1-596 AITGGVTLSV IASPVIAAVS VGIGVPIMLA YVYGVVPISL CRGGGCGVST ENSTTRP00000008522/1-521 AITGGVTLSV IASPVIAAVS VGIGVPIMLA YVYGVVPISL CRGGGCGVST 451 500 ENSP00000362555/1-732 ANGKGVKIEF DEDDGPITVA DAWRALKNPS IGESSIEGLT SVLSTSGSPT ENSBTAP00000010969/1-732 ANGKGVKIEF DEDDGPITVA DAWRALKNPS IGESSIEGLT SVLSTSGSPT BACU009635/1-480 ANGKGVKIEF DEDDGPITVA DAWRALKNPS IGESSIEGLT SVLSTSGSPT bmy_11812T0/1-596 ANGKGVKIEF DEDDGPITVA DAWRALKNPS IGESSIEGLT SVLSTSGSPT ENSTTRP00000008522/1-521 ANGKGVKIEF DEDDGPITVA DAWRALKNPS IGESSIEGLT SVLSTSGSPT 501 550 ENSP00000362555/1-732 DGLSVMQGPY SETASFAALS GGTLSGGILS SGKGKYSRLE VQADVQKEIF ENSBTAP00000010969/1-732 DGLSVMQGPY SETASFAALS GGTLSGGILS SGKGKYSRLE VQADVQKEIF BACU009635/1-480 DGLSVVQGPY SETASFAALS GGTLSGGILS SGKGKYSRLE VQADVQKEIF bmy_11812T0/1-596 DGLSVVQGPY SETASFAALS GGTLSGGILS SGKGKYSRLE VQADVQKEIF ENSTTRP00000008522/1-521 DGLSVMQGPY SETASFAALS GGTLSGGILS SGKGKYSRLE VQADVQKEIF 551 600 ENSP00000362555/1-732 PKDTASLGAI SDNASTRAMA GSIISSYNPQ DRECNNMEIQ VDIEAKPSHY ENSBTAP00000010969/1-732 PKDTASLGAI SDNASTRAMA GSIISSYNPQ DRECNNMEIQ VDIEAKPSHY BACU009635/1-480 PKDTASLGAI SDNASTRAMA GSIISSYNPQ DRECNNMEIQ VDIEAKPSHY bmy_11812T0/1-596 PKDTASLGAI SDNASTRAMA GSIISSYNPQ DRECNNMEIQ VDIEAKPSHY ENSTTRP00000008522/1-521 PKDTASLGAI SDNASTRAMA GSIISSYNPQ DRECNNMEIQ VDIEAKPSHY 601 650 ENSP00000362555/1-732 QLVSGSSTED SLHVHAQMAE NEEEGSGG-- ---GGSEEDP PCRHQSCEQK ENSBTAP00000010969/1-732 QLVSGSSTED SLHVHAQMAE NEEEGGGGSS GSSGNGEEDP PCKHQSCEQK BACU009635/1-480 QLVSGSSTED SLHVHAQMVE NEEEGGGG-- --GGSNEEDP PCKHQSCEQK bmy_11812T0/1-596 QLVSGSSTED SLHVHAQMVE NEEEGGGG-- --GGSNEEDP PCKHQSCEQK ENSTTRP00000008522/1-521 QLVSGSSTED SLHVHSQMVE NEEEGGGG-- --GGSNEEDP PCKHQNCEQK 651 700 ENSP00000362555/1-732 DCLASKPWDI SLAQPESIRS DLESSDAQSD DVPDITSDEC GSPRSHTAAC ENSBTAP00000010969/1-732 DCLASKPWDI SLAQPESIRS DLESSDTQSD DVPDITSDEC GSPRSQAAAC BACU009635/1-480 DCQASRPWDT SLAQPESIRS DLESSDTQSD DVPDITSDEC GSPHSPAAAC bmy_11812T0/1-596 DCQASRPWDI SLAQPESIRS DLESSDTQSD DVPDITSDEC GSPHSQAAAC ENSTTRP00000008522/1-521 DCQASRPWDI SLAQPESIRS DLESSDTQSD DVPDITSDEC GSPHSQAAAC 701 750 ENSP00000362555/1-732 PSTPRAQGAP SPSAHMNLSA LAEGQTVLKP EGGEARV ENSBTAP00000010969/1-732 PSTPRAPGAP SPSAHMNLSA PAEGKTILRP EDAEARV BACU009635/1-480 PSTPRAPGAP SPSAHMDLSA PAEGTAVLKP EDAEARV bmy_11812T0/1-596 PSTPRAPGAP SPSAHMNLSA PAEGTTVLKP EEAEARV ENSTTRP00000008522/1-521 PSTPRAPGAP SPSAHMNLSA PAEGTTVLKP EDAEARV