KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:39 2014 Check: 00 .. Name: ENSP00000321835/1-484 Len: 534 Check: 2425 Weight: 1.00 Name: ENSBTAP00000010973/1-525 Len: 534 Check: 2638 Weight: 1.00 Name: bmy_15246T0/1-472 Len: 534 Check: 7936 Weight: 1.00 Name: BACU008448/1-456 Len: 534 Check: 6368 Weight: 1.00 Name: ENSTTRP00000015212/1-473 Len: 534 Check: 6784 Weight: 1.00 // 1 50 ENSP00000321835/1-484 ---------- ---------- ---------- ---------- ------MERR ENSBTAP00000010973/1-525 LRPSPAALGA TQGGCSGPLA APVQTPGPQV SAPARGPGRV AGGSGRMERR bmy_15246T0/1-472 ---------- ---------- ---------- ---------- ------MERR BACU008448/1-456 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015212/1-473 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000321835/1-484 MKAGYLDQQV PYTFSSKSPG NGSLREALIG PLGKLMDPGS LPPLDSEDLF ENSBTAP00000010973/1-525 MKGGYLDQQV PYTFCSKSPG NGSLREALTV PQGKLMDPGS LPPPDSEDLF bmy_15246T0/1-472 MKGGYLDQQV PYTFCSKSPG NGSLREALMV PQGKLMDPRS LPPPDS---- BACU008448/1-456 ---------- ---------- --------MV PQGKLMDPGS LPPPDSEDLF ENSTTRP00000015212/1-473 ---------- PYTFCSKSPG NGSLREALMV PQGKLMDPGS LPPPDSEDLF 101 150 ENSP00000321835/1-484 QDLSHFQETW LAEAQVPDSD EQFVPDFHSE NLAFHSPTTR IKKEPQSPRT ENSBTAP00000010973/1-525 QDLSHFQETW LAEAQVPDSD EQFVPDFHSE NLAFHSPTTR IKKEPQSPRT bmy_15246T0/1-472 ---------- --EAQVPDSD EQFVPDFHSE NLAFHSPTTR IKKEPQSPRT BACU008448/1-456 QDLSHFQETW LAEAQVPDSD EQFVPDFHSE NLAFHSPTTR IKKEPQSPRA ENSTTRP00000015212/1-473 QDLSHFQETW LAEAQVPDSD EQFVPDFHSE NLAFHSPTTR IKKEPQSPRT 151 200 ENSP00000321835/1-484 DPALSCSRKP PLPYHHGEQC LYSSAYDPPR QIAIKSPAPG ALGQSPLQPF ENSBTAP00000010973/1-525 DPALSCSRKP PLPYHHGEQC LYS------R QIAIKSPAPG APGQSPLQAF bmy_15246T0/1-472 ERALPCSRKP SLSYHHGEQC LYSSAYDPPR QIAIKSPAPG APGQSPLQPF BACU008448/1-456 ERALPCSRKP SLSYHHGEQC LYSSAYDPPR QIAIKSPAPG APGQSPLQPF ENSTTRP00000015212/1-473 ERALPCSRKP SLSYHHGEQC LYSSAYDPPR QIVIKSPAPG APGQSPLQPF 201 250 ENSP00000321835/1-484 PRAEQRNFLR SSGTSQPHPG HGYLGEHSSV FQQPLDICHS FT-SQGGGRE ENSBTAP00000010973/1-525 PRAEQRNFLR SSSTSQPHPG HGYLGEHSSI FQQPLDVCHS FTPSQGAGRE bmy_15246T0/1-472 PRAEQRSFLR SSGTSQPHPG HGYLGEHSSV FQQPLDICHS FTPSQGGGRE BACU008448/1-456 PRAEQRSFLR SSGTSQPHPG HGYLGEHSSV FQQPLDICHS FTPSQGGGRE ENSTTRP00000015212/1-473 PRAEQRSFLR SSGTSQPHPG HGYLGEHSSV -QQPLDICHS FTPSQGGGRE 251 300 ENSP00000321835/1-484 PLPAPYQHQL SEPCPPYPQQ SFKQEYHDPL YEQAGQ---P AVDQGGVNGH ENSBTAP00000010973/1-525 PLPAPYQHQL SEPCPPYPQQ SFKQEYLDPL YEQAGQ---P AVGQGGVSGH bmy_15246T0/1-472 PLPAPYQHQL SEPCPPYPQQ SFKQEYLDPL YEQAGQPGQP AVGQGGVNGH BACU008448/1-456 PLPAPYQHQL SEPCPPYPQQ SFKQEYLDPL YEQAGQPGQP AVGQGGVNGH ENSTTRP00000015212/1-473 PLPAPYQHQL SEPCPPYPQQ SFKREYLDPL YEQAGQPGQP AVGQGGINGH 301 350 ENSP00000321835/1-484 RYPGAGVVIK QEQTDFAYDS DVTGCASMYL HTEGFSGPSP GDGAMGYGYE ENSBTAP00000010973/1-525 RYPGAGVVIK QEQTDFSYDS DVPGYASMYL HTEGFSGPSP GDRTVGYGYE bmy_15246T0/1-472 RYPGAGVVIK QEQMHFSYDS DVPGYASMYL HAESFSGPSP GDGTMGYGYE BACU008448/1-456 RYPGAGVVIK QEQMDFSYDS DVPGYASMYL HAEGFSGPSP GDGTMGYGYE ENSTTRP00000015212/1-473 RYPGAGVVIK QEQMDFSYDS DVPGYASMYL HAEGFSGPSP GDGTMGYGYE 351 400 ENSP00000321835/1-484 KPLRPFPDDV CVVPEKFEGD IKQEGVGAFR EGPPYQRRGA LQLWQFLVAL ENSBTAP00000010973/1-525 KPLRPFPDDV CVVPEKFEGD IKQEGMGAFR EGPPYQRRGA LQLWQFLVAL bmy_15246T0/1-472 KPLRQFPDDV CVVPEKFEGD IKQEGVGAFR EGPPYQRRGA LQLWQFLVAL BACU008448/1-456 KPLRPFPDDV CVVPEKFEGD IKQEGVGAFR EGPPYQRRGA LQLWQFLVAL ENSTTRP00000015212/1-473 KPLRPFPDDV CVVPEKFEGD IKQEGVGAFR EGPPYQRRGA LQLWQFLVAL 401 450 ENSP00000321835/1-484 LDDPTNAHFI AWTGRGMEFK LIEPEEVARL WGIQKNRPAM NYDKLSRSLR ENSBTAP00000010973/1-525 LDDPTNAHFI AWTGRGMEFK LIEPEEVARL WGIQKNRPAM NYDKLSRSLR bmy_15246T0/1-472 LDDPTNAHFI AWTGRGMEFK LIEPEEVARL WGIQKNRPAM NYDKLSRSLR BACU008448/1-456 LDDPTNAHFI AWTGRGMEFK LIEPEEVARL WGIQKNRPAM NYDKLSRSLR ENSTTRP00000015212/1-473 LDDPTNAHFI AWTGRGMEFK LIEPEEVARL WGIQKNRPAM NYDKLSRSLR 451 500 ENSP00000321835/1-484 YYYEKGIMQK VAGERYVYKF VCEPEALFSL AFPDNQRPAL KAEFDRPVSE ENSBTAP00000010973/1-525 YYYEKGIMQK VAGERYVYKF VCEPEALFSL AFPDNQRPAL KAEFDRPVSE bmy_15246T0/1-472 YYYEKGIMQK VAGERYVYKF VCEPEALFSL AFPDNQRPTL KAEFDRPVSE BACU008448/1-456 YYYEKGIMQK VAGERYVYKF VCEPEALFSL AFPDNQRPTL KAEFDRPVSE ENSTTRP00000015212/1-473 YYYEKGIMQK VAGERYVYKF VCEPEALFSL AFPDNQRPTL KAEFDRPVSE 501 550 ENSP00000321835/1-484 EDTVPLSHLD ESPAYLPELA GPAQPFGPKG GYSY ENSBTAP00000010973/1-525 EDTVPLSHLD ESPAYLPELA GPAQPFGPKG GYSY bmy_15246T0/1-472 EDTVPLSHLD ESPSYLPELA GPAQPFGPKG GYSY BACU008448/1-456 EDTVPLSHLD ESPAYLPELA GPAQPFGPKG GYSY ENSTTRP00000015212/1-473 EDTVPLSHLD ESPAYLPELA GPAQPFGPKG GYSY