KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:40 2014 Check: 00 .. Name: ENSP00000262415/1-1220 Len: 1232 Check: 1587 Weight: 1.00 Name: ENSBTAP00000010976/1-1230 Len: 1232 Check: 2820 Weight: 1.00 Name: BACU008449/1-1161 Len: 1232 Check: 6685 Weight: 1.00 Name: bmy_15247T0/1-1149 Len: 1232 Check: 2548 Weight: 1.00 // 1 50 ENSP00000262415/1-1220 ---------- --MAVAVAMA GALIGSEPGP AEELAKLEYL SLVSKVCTEL ENSBTAP00000010976/1-1230 KDRGEGPREA VAMAVAVAMA GAVPGTELGP AEELAKLEYL SLVSKVCTEL BACU008449/1-1161 ---------- --MAVAVATA GAVPGTELGP AEELAKLEYL SLVSKVCTEL bmy_15247T0/1-1149 ---------- --MAVAVATA GAVPGTELGP AEELAKLEYL SLVSKVCTEL 51 100 ENSP00000262415/1-1220 DNHLGINDKD LAEFVISLAE KNTTFDTFKA SLVKNGAEFT DSLISNLLRL ENSBTAP00000010976/1-1230 DNHLGINDKD LAEFVISLAE KNTTFDTFKA SLVKNGAEFT DSLISNLLRL BACU008449/1-1161 DNHLGINDKD LAEFVISLAE KNTTFDTFKA SLVKNGAEFT ---------- bmy_15247T0/1-1149 DNHLGINDKD LAEFVISLAE KNTTFDTFKA SLVKNGAEFT DSLVSNLLRL 101 150 ENSP00000262415/1-1220 IQTMRPPAKP STSKDPVVKP KTEKEKLKEL FPVLCQPDNP SVRTMLDEDD ENSBTAP00000010976/1-1230 IQTMRPPAKP STSKDPVVKP KTEKEKLKEL FPVLCQPDNP SVRTMLDEDD BACU008449/1-1161 ---------- ---------- ---------- ---------- ---TMLDEDD bmy_15247T0/1-1149 IQTMRPPAKP SASKDPVVKP KTEKEKLKEL FPVLCQPDNP SVRTMLDEDD 151 200 ENSP00000262415/1-1220 VKVAVDVLKE LEALMPSAAG QEKQRDAEHR DRTKKKKRSR SRDRNRDRDR ENSBTAP00000010976/1-1230 VKVAVDVLKE LEALMPSAAG QEKHRDTEHR DKAKKKKRSR SRERDRDRER BACU008449/1-1161 VKVAVDVLKE LEALMPSAAG QEKHRDAEHR DKTKKKKRS- ---RERDRER bmy_15247T0/1-1149 VKVAVDVLKE LEALMPSAAG QEKHRDAEHR DKTKKKKRS- ---RERDRER 201 250 ENSP00000262415/1-1220 DRERNRDRDH KRRHRSRSRS RSRTRERNKV KSRYRSRSRS QSPPKDRKDR ENSBTAP00000010976/1-1230 ERERD--RDH KRRHRSRSRS RSRTRDRNKG KSRYRSRSRS QSPPRDRKDR BACU008449/1-1161 DRDRN--RDH KRRHRSRSRS RSRTRERNKG KSRYRSRSRS QSPPRDRKDR bmy_15247T0/1-1149 DRDRN--RDH KRRHRSRSRS RSRTRERNKG KSRYRSRSRS QSPPRDRKDR 251 300 ENSP00000262415/1-1220 DKYGERNLDR WRDKHVDRPP PEEPTIGDIY NGKVTSIMQF GCFVQLEGLR ENSBTAP00000010976/1-1230 DKYGDRNLDR WRDKHVDRPP PEEPAIGDIY NGKVTSIMQF GCFVQLEGLR BACU008449/1-1161 DKYGERNLDR WRDKHVDRPP PEEPAIGDVY NGKVTSIMQF GCFVQLEGLR bmy_15247T0/1-1149 DKYGERNLDR WRDKHVDRPP PEEPAIGDVY NGKVTSIMQF GCFVQLEGLR 301 350 ENSP00000262415/1-1220 KRWEGLVHIS ELRREGRVAN VADVVSKGQR VKVKVLSFTG TKTSLSMKDV ENSBTAP00000010976/1-1230 KRWEGLVHIS ELRREGRVAN VADVVSKGQR VKVKVLSFTG TKTSLSMKDV BACU008449/1-1161 KRWEGLVHIS ELRREGRVAN VADVVSKGQR VKVKVLSFTG TKTSLSMKDV bmy_15247T0/1-1149 KRWEGLVHIS ELRREGRVAN VADVVSKGQR VKVKVLSFTG TKTSLSMKDV 351 400 ENSP00000262415/1-1220 DQETGEDLNP NRRRNLVGET NEETSMRNPD RPTHLSLVSA PEVEDDSLER ENSBTAP00000010976/1-1230 DQETGEDLNP NRRRNLVGET NEETSMRNPD RPTHLSLVSA PEVEDDSLER BACU008449/1-1161 DQETGEDLNP NRRRNLVGET NEETSMRNPD RPTHLSLVSA PEVEDDSLER bmy_15247T0/1-1149 DQETGEDLNP NRRRNLVGET NEETSMRNPD RPTHLSLVSA PEVEDDSLER 401 450 ENSP00000262415/1-1220 KRLTRISDPE KWEIKQMIAA NVLSKEEFPD FDEETGILPK VDDEEDEDLE ENSBTAP00000010976/1-1230 KRLTRISDPE KWEIKQMIAA NVLSKEEFPD FDEETGILPK VDDEEDEDLE BACU008449/1-1161 KRLTRISDPE KWEIKQMIAA NVLSKEEFPD FDEETGILPK VDDEEDEDLE bmy_15247T0/1-1149 KRLTRISDPE KWEIKQMIAA NVLSKEEFPD FDEETGILPK VDDEEDEDLE 451 500 ENSP00000262415/1-1220 IELVEEEPPF LRGHTKQSMD MSPIKIVKNP DGSLSQAAMM QSALAKERRE ENSBTAP00000010976/1-1230 IELVEEEPPF LRGHTKQSMD MSPIKIVKNP DGSLSQAAMM QSALAKERRE BACU008449/1-1161 IELVEEEPPF LRGHTKQSMD MSPIKIVKNP DGSLSQAAMM QSALAKERRE bmy_15247T0/1-1149 IELVEEEPPF LRGHTKQSMD MSPIKIVKNP DGSLSQAAMM QSALAKERRE 501 550 ENSP00000262415/1-1220 LKQAQREAEM DSIPMGLNKH WVDPLPDAEG RQIAANMRGI GMMPNDIPEW ENSBTAP00000010976/1-1230 LKQAQREAEM DSIPMGLNKH WVDPLPDAEG RQIAANMRGI GMMPNDIPEW BACU008449/1-1161 LKQAQREAEM DSIPMGLNKH WVDPLPDAEG RQIAANMRGI GMMPNDIPEW bmy_15247T0/1-1149 LKQAQREAEM DSIPMGLNKH WVDPLPDAEG RQIAANMRGI GMMPNDIPEW 551 600 ENSP00000262415/1-1220 KKHAFGGNKA SYGKKTQMSI LEQRESLPIY KLKEQLVQAV HDNQILIVIG ENSBTAP00000010976/1-1230 KKHAFGGNKA SYGKKTQMSI IEQRESLPIY KLKEQLVQAV HDNQILIVIG BACU008449/1-1161 KKHAFGGNKA SYGKKTQMSI IEQRESLPIY KLKEQLVQAV HDNQILIVIG bmy_15247T0/1-1149 KKHAFGGNKA SYGKKTQMSI IEQRESLPIY KLKEQLVQ-- ---------- 601 650 ENSP00000262415/1-1220 ETGSGKTTQI TQYLAEAGYT SRGKIGCTQP RRVAAMSVAK RVSEEFGCCL ENSBTAP00000010976/1-1230 ETGSGKTTQI TQYLAEAGYT SRGKIGCTQP RRVAAMSVAK RVSEEFGCCL BACU008449/1-1161 ETGSGKTTQI TQYLAEAGYT SRGKIGCTQP RRVAAMSVAK RVSEEFGCCL bmy_15247T0/1-1149 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000262415/1-1220 GQEVGYTIRF EDCTSPETVI KYMTDGMLLR ECLIDPDLTQ YAIIMLDEAH ENSBTAP00000010976/1-1230 GQEVGYTIRF EDCTSPETVI KYMTDGMLLR ECLIDPDLTQ YAIIMLDEAH BACU008449/1-1161 GQEVGYTIRF EDCTSPETVI KYMTDGMLLR ECLIDPDLTQ YAIIMLDEAH bmy_15247T0/1-1149 ---VGYTIRF EDCTSPETVI KYMTDGMLLR ECLIDPDLTQ YAIIMLDEAH 701 750 ENSP00000262415/1-1220 ERTIHTDVLF GLLKKTVQKR QDMKLIVTSA TLDAVKFSQY FYEAPIFTIP ENSBTAP00000010976/1-1230 ERTIHTDVLF GLLKKTVQKR QDMKLIVTSA TLDAVKFSQY FYEAPIFTIP BACU008449/1-1161 ERTIHTDVLF GLLKKTVQKR QDMKLIVTSA TLDAVKFSQY FYEAPIFTIP bmy_15247T0/1-1149 ERTIHTDVLF GLLKKTVQKR QDMKLIVTSA TLDAVKFSQY FYEAPIFTIP 751 800 ENSP00000262415/1-1220 GRTYPVEILY TKEPETDYLD ASLITVMQIH LTEPPGDILV FLTGQEEIDT ENSBTAP00000010976/1-1230 GRTYPVEILY TKEPETDYLD ASLITVMQIH LTEPPGDILV FLTGQEEIDT BACU008449/1-1161 GRTYPVEILY TKEPETDYLD ASLITVMQIH LTEPPGDILV FLTGQEEIDT bmy_15247T0/1-1149 GRTYPVEILY TKEPETDYLD ASLITVMQIH LTEPPGDILV FLTGQEEIDT 801 850 ENSP00000262415/1-1220 ACEILYERMK SLGPDVPELI ILPVYSALPS EMQTRIFDPA PPGSRKVVIA ENSBTAP00000010976/1-1230 ACEILYERMK SLGPDVPELI ILPVYSALPS EMQTRIFDPA PPGSRKVVIA BACU008449/1-1161 ACEILYERMK SLGPDVPELI ILPVYSALPS EMQTRIFDPA PPGSRKVVIA bmy_15247T0/1-1149 ACEILYERMK SLGPDVPELI ILPVYSALPS EMQTRIFDPA PPGSRKVVIA 851 900 ENSP00000262415/1-1220 TNIAETSLTI DGIYYVVDPG FVKQKVYNSK TGIDQLVVTP ISQAQAKQRA ENSBTAP00000010976/1-1230 TNIAETSLTI DGIYYVVDPG FVKQKVYNSK TGIDQLVVTP ISQAQAKQRA BACU008449/1-1161 TNIAETSLTI DGIYYVVDPG FVKQKVYNSK TGIDQLVVTP ISQAQAKQRA bmy_15247T0/1-1149 TNIAETSLTI DGIYYVVDPG FVKQKVYNSK TGIDQLVVTP ISQAQAKQRA 901 950 ENSP00000262415/1-1220 GRAGRTGPGK CYRLYTERAY RDEMLTTNVP EIQRTNLAST VLSLKAMGIN ENSBTAP00000010976/1-1230 GRAGRTGPGK CYRLYTERAY RDEMLTTNVP EIQRTNLAST VLSLKAMGIN BACU008449/1-1161 GRAGRTGPGK CYRLYTERAY RDEMLTTNVP EIQRTNLAST VLSLKAMGIN bmy_15247T0/1-1149 GRAGRTGPGK CYRLYTERAY RDEMLTTNVP EIQRTNLAST VLSLKAMGIN 951 1000 ENSP00000262415/1-1220 DLLSFDFMDA PPMETLITAM EQLYTLGALD DEGLLTRLGR RMAEFPLEPM ENSBTAP00000010976/1-1230 DLLSFDFMDA PPMETLITAM EQLYTLGALD DEGLLTRLGR RMAEFPLEPM BACU008449/1-1161 DLLSFDFMDA PPMETLITAM EQLYTLGALD DEGLLTRLGR RMAEFPLEPM bmy_15247T0/1-1149 DLLSFDFMDA PPMETLITAM EQLYTLGALD DEGLLTRLGR RMAEFPLEPM 1001 1050 ENSP00000262415/1-1220 LCKMLIMSVH LGCSEEMLTI VSMLSVQNVF YRPKDKQALA DQKKAKFHQT ENSBTAP00000010976/1-1230 LCKMLIMSVH LGCSEEMLTI VSMLSVQNVF YRPKDKQALA DQKKAKFHQT BACU008449/1-1161 LCKMLIMSVH LGCSEEMLTI VSMLSVQNVF YRPKDKQALA DQKKAKFHQT bmy_15247T0/1-1149 LCKMLIMSVH LGCSEEMLTI VSMLSVQNVF YRPKDKQALA DQKKAKFHQT 1051 1100 ENSP00000262415/1-1220 EGDHLTLLAV YNSWKNNKFS NPWCYENFIQ ARSLRRAQDI RKQMLGIMDR ENSBTAP00000010976/1-1230 EGDHLTLLAV YNSWKNNKFS NPWCYENFIQ ARSLRRAQDI RKQMLGIMDR BACU008449/1-1161 EGDHLTLLAV YNSWKNNKFS NPWCYENFIQ ARSLRRAQDI RKQMLGIMDR bmy_15247T0/1-1149 EGDHLTLLAV YNSWKNNKFS NPWCYENFIQ ARSLRRAQDI RKQMLGIMDR 1101 1150 ENSP00000262415/1-1220 HKLDVVSCGK STVRVQKAIC SGFFRNAAKK DPQEGYRTLI DQQVVYIHPS ENSBTAP00000010976/1-1230 HKLDVVSCGK STVRVQKAIC SGFFRNAAKK DPQEGYRTLI DQQVVYIHPS BACU008449/1-1161 HKLDVVSCGK STVRVQKAIC SGFFRNAAKK DPQEGYRTLI DQQVVYIHPS bmy_15247T0/1-1149 HKLDVVSCGK STVRVQKAIC SGFFRNAAKK DPQEGYRTLI DQQVVYIHPS 1151 1200 ENSP00000262415/1-1220 SALFNRQPEW VVYHELVLTT KEYMREVTTI DPRWLVEFAP AFFKVSDPTK ENSBTAP00000010976/1-1230 SALFNRQPEW VVYHELVLTT KEYMREVTTI DPRWLVEFAP AFFKVSDPTK BACU008449/1-1161 SALFNRQPEW VVYHELVLTT KEYMREVTTI DPRWLVEFAP AFFKVSDPTK bmy_15247T0/1-1149 SALFNRQPEW VVYHELVLTT KEYMREVTTI DPRWLVEFAP AFFKVSDPTK 1201 1250 ENSP00000262415/1-1220 LSKQKKQQRL EPLYNRYEEP NAWRISRAFR RR ENSBTAP00000010976/1-1230 LSKQKKQQRL EPLYNRYEEP NAWRISRAFR RR BACU008449/1-1161 LSKQKKQQRL EPLYNRYEEP NAWRISRAFR RR bmy_15247T0/1-1149 LSKQKKQQRL EPLYNRYEEP NAWRISRAFR RR