KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:43 2014 Check: 00 .. Name: ENSTTRP00000006485/1-354 Len: 411 Check: 1333 Weight: 1.00 Name: ENSP00000222572/1-354 Len: 411 Check: 9628 Weight: 1.00 Name: ENSBTAP00000011009/1-354 Len: 411 Check: 9920 Weight: 1.00 Name: bmy_19989T0/1-383 Len: 411 Check: 250 Weight: 1.00 Name: BACU016839/1-368 Len: 411 Check: 1333 Weight: 1.00 // 1 50 ENSTTRP00000006485/1-354 MGRLLSLSLL GIALALLGER LLALRNRLKA SREVESVDLP NCHLIKGI-- ENSP00000222572/1-354 MGRLVAVGLL GIALALLGER LLALRNRLKA SREVESVDLP HCHLIKGI-- ENSBTAP00000011009/1-354 MGRLLALSLL GIALALLGER LLALRNRLKA SREVESVDLP NCHLIKGI-- bmy_19989T0/1-383 MGRLLALSLL GIALALLGER LLALRKGFRL TFIKESGSLE E--KIRTI-- BACU016839/1-368 MGRLLALSLL GIALALLGER LLALRNRLKA SREVESVDLP NCHLIKGIEV 51 100 ENSTTRP00000006485/1-354 ---------- ---------- ---------- ---------- ---------- ENSP00000222572/1-354 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011009/1-354 ---------- ---------- ---------- ---------- ---------- bmy_19989T0/1-383 ---------- ---------- ----PKDTDT DKVNKALPNK SQNSNMTFIY BACU016839/1-368 HCRKGFRLTF IKESGSLEEK IGTIPKDTDT DKVNKALPNK SQNSNMTFIY 101 150 ENSTTRP00000006485/1-354 -----EAGSE DIDILPNGLA FFSVGLKXXX XXXXXXXXXX XXXXXXXXXX ENSP00000222572/1-354 -----EAGSE DIDILPNGLA FFSVGLKFPG LHSFAPDKPG GILMMDLKEE ENSBTAP00000011009/1-354 -----EAGAE DIDILPNGLA FFSVGLKCPG LHSFAPDKPG GILMMDLNEE bmy_19989T0/1-383 FLNLTEAGSE DIDILPNGLA FFSVGLKCPG LHSFAPDKPG GILMMDLKEE BACU016839/1-368 FLNLTEAGSE DIDILPNGLA FFSVGLKCPG LHSFAPDKPG GILMMDLKEE 151 200 ENSTTRP00000006485/1-354 XXXXXXXRIS RGFNLASFNP HGISTFIDDD NTVYLFVVNH PEFKNTVEIF ENSP00000222572/1-354 KPRARELRIS RGFDLASFNP HGISTFIDND DTVYLFVVNH PEFKNTVEIF ENSBTAP00000011009/1-354 NPRALELRVS RGFNLASFNP HGISTFIDSD DTVYLFVVNH PEFKNTVEIF bmy_19989T0/1-383 NPRALELRIS RGFNLASFNP HGISTFIDSD NTVYLFVVNH PEFKNTVEIF BACU016839/1-368 NPRALELRIS RGFNLASFNP HGISTFIDSD NTVYLFVVNH PEFKNTVEIF 201 250 ENSTTRP00000006485/1-354 KFEEEENSLL HLKTIKHELL PSVNDIIAVG PAHFYATNDH YFSDPFLKYL ENSP00000222572/1-354 KFEEAENSLL HLKTVKHELL PSVNDITAVG PAHFYATNDH YFSDPFLKYL ENSBTAP00000011009/1-354 KFEEEENSLL HLKTIKHELL PSVNDIIAVG PEHFYATNDH YFSDPFLKYL bmy_19989T0/1-383 KFEEEENSLL HLKTIKHELL PSVNDIIAVG PAHFYATNDH YFSDPFLKYL BACU016839/1-368 KFEEEENSLL HLKTIKHELL PSVNDIIAVG PAHFYATNDH YFSDPFLKYL 251 300 ENSTTRP00000006485/1-354 ETYLNLHWTN VVYYSPDEVK VVAEGFDSAN GINISPDKKY IYVADILAHE ENSP00000222572/1-354 ETYLNLHWAN VVYYSPNEVK VVAEGFDSAN GINISPDDKY IYVADILAHE ENSBTAP00000011009/1-354 ETYLNLHWTN VVYYSPNEVK VVAEGFDSAN GINISPDKKY IYVADILAHE bmy_19989T0/1-383 ETYLNLHWTN VVYYSPNEVK VVAEGFDSAN GINISPDKKY IYVADILAHE BACU016839/1-368 ETYLNLHWTN VVYYSPNEVK VVAEGFDSAN GINISPDKKY IYVADILAHE 301 350 ENSTTRP00000006485/1-354 IHVLEKHPNM NLTQLKVLKL DTLVDNLSID PSSGDILVGC HHNGQKLFVY ENSP00000222572/1-354 IHVLEKHTNM NLTQLKVLEL DTLVDNLSID PSSGDIWVGC HPNGQKLFVY ENSBTAP00000011009/1-354 IHVLEKHPNM NLTQLKVLKL DTLVDNLSID PSSGDVLVGC HPNGQKLFVY bmy_19989T0/1-383 IHVLEKHPNM NLTQLKVLKL DTLVDNLSID PSSGDILVGC HPNGQKLFIY BACU016839/1-368 IHVLEKHPNM NLTQLK---- ---------- ---------- ---------- 351 400 ENSTTRP00000006485/1-354 DPNNPPSSEV LRIQNILSEK PTVTTVYANN GSVLQGSSVA SVYDRKLLIG ENSP00000222572/1-354 DPNNPPSSEV LRIQNILSEK PTVTTVYANN GSVLQGSSVA SVYDGKLLIG ENSBTAP00000011009/1-354 DPKNPPSSEV LRIQNILSEK PTVTTVYANN GSVLQGSSVA SVYDKKLLIG bmy_19989T0/1-383 DPNNPPSSEV LRIQNILSEK PTVTTVYANN GSVLQGSSVA SVYDRKLLIG BACU016839/1-368 ---------V LRIQNILSEK PTVTTVYANN GSVLQGSSVA SVYDRKLLIG 401 450 ENSTTRP00000006485/1-354 TLYHRALYCQ L ENSP00000222572/1-354 TLYHRALYCE L ENSBTAP00000011009/1-354 TLYHRALYCE L bmy_19989T0/1-383 TLYHRALYCQ L BACU016839/1-368 TLYHRALYCQ L