KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:44 2014 Check: 00 .. Name: ENSP00000321029/1-514 Len: 577 Check: 7203 Weight: 1.00 Name: ENSBTAP00000011011/1-573 Len: 577 Check: 549 Weight: 1.00 Name: ENSTTRP00000009307/1-512 Len: 577 Check: 6309 Weight: 1.00 Name: bmy_09168T0/1-368 Len: 577 Check: 6134 Weight: 1.00 Name: BACU008514/1-571 Len: 577 Check: 4112 Weight: 1.00 // 1 50 ENSP00000321029/1-514 ---MEDSEFL ---------- ---------- ---------- ---------- ENSBTAP00000011011/1-573 MDLSSDYHFL NQILWRRVRL TLVCGIFEGV LQHVDPDKIV VLKTVKNVET ENSTTRP00000009307/1-512 ----AEREFL ---------- ---------- ---------- ---------- bmy_09168T0/1-368 ---------- ---------- ---------- ---------- ---------- BACU008514/1-571 MDPSSDYHFL NQILWRRVKL TLVCGIFEGV LQHVDPNKIV VLKKVKNVET 51 100 ENSP00000321029/1-514 ---------- -----AYVEL LDEVEQGSVR AKASSV--SL HAERTWMEKM ENSBTAP00000011011/1-573 GLSVPGVKMF FGHEIVNVEL LDEVEQGAVR EKASSVRYSL NTERTKMDTI ENSTTRP00000009307/1-512 ---------- -----AYVEL LDEEEQGAVR EKASSV--SL NTERNRMDTI bmy_09168T0/1-368 ---------- ---------- ---------- ---------- ---------- BACU008514/1-571 DRSVPGVKMF FGHEIVNVEL LDEEEQGAVR EKASSV--SL NTERNRMDTI 101 150 ENSP00000321029/1-514 KVEDLNVCEP ASPAPEAPAT SLLNDLKYSP SEEEEVTYTV INQFQQKFGA ENSBTAP00000011011/1-573 KDEDLNVRKP ASPAPEVPIT SLLNDFKYSP SEEEEVTYTV IDQFQQKFGA ENSTTRP00000009307/1-512 KDEDLNVYKP ASPASEAPTT SLLNDLKYSP SEEEEVTYTV IDQFQQKFGA bmy_09168T0/1-368 ---------- ---------- ---------- ---------- ---------- BACU008514/1-571 KDEDLNVYKP ASPAPEAPTT SLLNDLKYSP SEEEEVTYTV VDQFQQKFGA 151 200 ENSP00000321029/1-514 AILHIKKQNV LSVAAEGANV CRHGKLCWLQ VATNCRVYLF DIFLLGSRAF ENSBTAP00000011011/1-573 AMLHIKKQSV LSVAAEGANV CRHGKLCWLQ VATNSRVYLF DIFLLGSRAF ENSTTRP00000009307/1-512 AMLHIKKQSV LSVAAEGANV CRHGRLCWLQ VATSSRVYLF DIFLLGSRVF bmy_09168T0/1-368 ---------- ---------- ---------- ---------- ---------- BACU008514/1-571 AMLHIKKQSV LSVAAEGANV CRHGKLCWLQ VATNSRVYLF DIFLLGSRAF 201 250 ENSP00000321029/1-514 HNGLQMILED KRILKVIHDC RWLSDCLSHQ YGILLNNVFD TQVADVLQFS ENSBTAP00000011011/1-573 NNGLQMVLED KRILKVIHDC RWLSDCLSHQ YGILLNNVFD TQVADVLQFS ENSTTRP00000009307/1-512 SNGLQIVLED KRILKVIHDC RWLSDCLSHQ YGILLNNVFD TQVADVLQFS bmy_09168T0/1-368 -----MVLED KRILKVIHDC RWLSDCLCHQ YGILLNNVFD TQVADVLQFS BACU008514/1-571 SNGLRMVLED KRILKVIHDC RWLSDCLFHQ YGILLNNVFD TQVADVLQFS 251 300 ENSP00000321029/1-514 METGGYLPNC ITTLQESLIK HLQVAPKYLS FLEKRQKLIQ ENPEVWFIRP ENSBTAP00000011011/1-573 VETGGFLPNC ISTLQESLIR HLKIAPKHLS FLEVRQKWIR ENPELWFTRP ENSTTRP00000009307/1-512 METGGFLPNC ISTLQESLIR HLKIAPKYLS FLEERQKRIQ ENPELWFTRP bmy_09168T0/1-368 METGGFLPNC ISTLQESLIK HLKIAPKYLS FLEERQKRIR ENPELWFTRP BACU008514/1-571 METGGFLPNC ISTLQESLIK HLKIAPKHLS FLEERQKRIR ENPELWFTRP 301 350 ENSP00000321029/1-514 VSPSLLKILA LEATYLLPLR LALLDEMMSD LTTLVDGYLN TYREGSADRL ENSBTAP00000011011/1-573 LSPSLLKILA LEATYLLPLR LVLLDEMMSD LTTLVDGYLN TYREGSADRL ENSTTRP00000009307/1-512 LSPFLLKILA LEATYLLPLR LVLLDEMMSD LTTLVDGYLN TYREGSADWL bmy_09168T0/1-368 LSPSLLKILA LEATYLLPLR LVLLDEMMSD LTTLVDGYLN TYREGSADWL BACU008514/1-571 LSPSLLKILA LEATYLLPLR LVLLDEMMSD LTTLVDGYLN TYREGSADWL 351 400 ENSP00000321029/1-514 GGTEPTCMEL PEELLQLKDF QKQRREKAAR EYRVNAQGLL IRTVLQPKKL ENSBTAP00000011011/1-573 GGMEPTCMEL PEELLQLQDF QKQRRERAAK EYRVNAQGLL IRTVLHPKKS ENSTTRP00000009307/1-512 GGMERTCMEL PEELLRLKDF QRQRRERAAK EYRVNAQGLL IRTVLHPKKS bmy_09168T0/1-368 GGMERTCMEL PEELLQLKDF QRQRRERAAK EYRVNAQGLL IRTVLHPKKS BACU008514/1-571 GGMERTCMEL PEELLQLKDF QRQRRERAAK EYRVNAQGLL IRTVLHPKTS 401 450 ENSP00000321029/1-514 VTETAGKEEK VKGFLFGKNF RIDKAPSFTS QDFHGDVNLL KEESLNKQAT ENSBTAP00000011011/1-573 VTETAGKEGK VRGFLLCKNS TQDKAPNVTS ---REDVDLL KEESKSRQTT ENSTTRP00000009307/1-512 MTETAGKKGK VRGFLLCKNS RLDKAPNFTS ---HKDVNLL KEESTSKQTT bmy_09168T0/1-368 MTETAGKEGK VRGFLLCKNS RLDKAPNFTS ---HKDVNLL KEESKSKQTT BACU008514/1-571 MTETAGKEGK VRGFLLCKNS RLDKPPNFTS ---HKDVSLL KEESKSKQTT 451 500 ENSP00000321029/1-514 -NPQHLPPTE EGETSEDSSN KLICTKSKGS EDQRITQKEH FMTPKHEFQA ENSBTAP00000011011/1-573 VEPQYLPLTK E-DASEDSSY NLNYPESEGV KDQRITQKKH LKIPKQEFQT ENSTTRP00000009307/1-512 AESQHLPPIK E-EVSEDSSN KRICPESEGF KDQRITLKEY LKIPKQEFQT bmy_09168T0/1-368 AEPQHLPPIK K-EVSEDSSN KQICPESEGF KDQRITQKAY LKIPKQEFQT BACU008514/1-571 AEPQHLPPIK E-EVSEDSSN KQICPESEGF KDQRITQKAY LKIPKQEFQT 501 550 ENSP00000321029/1-514 SLSLKEETEQ LLMVENKEDL KCTKQAVSMS -SFPQETRVS PSDTFYPIRK ENSBTAP00000011011/1-573 SLSLKEEIEQ LLMVENKEDL KGTKQDVSVS PSLPQETRVS PSDIFHPFRK ENSTTRP00000009307/1-512 NLSLKEEIEQ LLMVENKEDL KCTKQDVLVS PSLPQETRVS PSDIFHPFRK bmy_09168T0/1-368 NLSLKEEIEQ LMMVENKEDL KCTKQDVLVS PSLPQETRVS PSDIFHPFRK BACU008514/1-571 NLSLKEEIEQ LLMVENKEDL KCTKQDVLVS PSLPQETGVS PSDIFHPFRK 551 600 ENSP00000321029/1-514 TVVSTLPPCP ALEKIDSWIS P-FLNLP ENSBTAP00000011011/1-573 AVLPTLPPCP ALEKTDSWLN PDSPNLP ENSTTRP00000009307/1-512 AVLPTLPPCP ALEKTDSWIN PDSPNLP bmy_09168T0/1-368 AVLPTLPPCP ALEKTDSWIN PDSTNLP BACU008514/1-571 AVLPTLPPCP ALEKTDSWIN PDSPNLP