KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:44 2014 Check: 00 .. Name: bmy_12730T0/1-381 Len: 419 Check: 1131 Weight: 1.00 Name: ENSP00000327509/1-411 Len: 419 Check: 4440 Weight: 1.00 Name: ENSBTAP00000011014/1-419 Len: 419 Check: 4505 Weight: 1.00 Name: BACU007005/1-408 Len: 419 Check: 926 Weight: 1.00 // 1 50 bmy_12730T0/1-381 MTEMSEKENE PDDAATHTPP GTVSALQETK LQRFKRSLSL KNILRSKSME ENSP00000327509/1-411 MTEMSEKENE PDDAATHSPP GTVSALQETK LQRFKRSLSL KTILRSKSLE ENSBTAP00000011014/1-419 MTEMSEKENE PDDAATHTPP GTVSALQETK LQRFKRSLSL KTILRSKSVE BACU007005/1-408 MTEMSEKENE PDDAATHTPP GTVSALQETK LQRFKRSLSL KNILRSKSME 51 100 bmy_12730T0/1-381 NFFFRSGSEL KCPTEVLLTP PTPLPPPSPP PASADRGLPT PALSPCPIPR ENSP00000327509/1-411 NFFLRSGSEL KCPTEVLLTP PTPLPPPSPP PTASDRGLAT PSPSPCPVPR ENSBTAP00000011014/1-419 NFLFRSGSEL KCPTEVLLTP PTPLPPPTPP PASADRGLPT PAPSPCPVPR BACU007005/1-408 NFFFRSGSEL KCPTEVLLTP PTPLPPPSPP PASADRGLPT PALSPRPIPR 101 150 bmy_12730T0/1-381 PLGPLKPVRL HSFQEHVFKR ASPCELCHQF IVGNSKQGLR CKTCKVSVHL ENSP00000327509/1-411 PLAALKPVRL HSFQEHVFKR ASPCELCHQL IVGNSKQGLR CKMCKVSVHL ENSBTAP00000011014/1-419 PLAPLKPVRL HSFQEHVFKR ASPCELCHQL IVGNSKQGLR CKTCKVSVHL BACU007005/1-408 PLAPLKPVRL HSFQEHVFKR ASPCELCHQF IVGNSKQGLR CKTCKVSVHL 151 200 bmy_12730T0/1-381 WCSEEISHQQ CPGKTSSSFR RNFSSPLLVH EPPPACAMSK ESPPTGEC-- ENSP00000327509/1-411 WCSEEISHQQ CPGKTSTSFR RNFSSPLLVH EPPPVCATSK ESPPTGDSGK ENSBTAP00000011014/1-419 WCSEEISHQQ CPGKTSSSFR RNFSSPLLVH EPPPACAMSK ESPPTGASGK BACU007005/1-408 WCSEEISHQQ CPGKTSSSFR RNFSSPLLVH EPPPACAMSK ESPPTGASGK 201 250 bmy_12730T0/1-381 --PLL----- ---------- --------PL IPLWGRN--- --------GA ENSP00000327509/1-411 VDPVYETLRY GTSLALMNRS SFSSTSESPT RSLSERDELT EDGEGSIRSS ENSBTAP00000011014/1-419 VDPVYETLRY GTSLALMNRS SFSSTSESPT RSLSERDELT EDGEGSIRSS BACU007005/1-408 VDPVYETLRY GTSLALMNSS SFSSNSESPT RSLSERDELI EDGEGSIRSS 251 300 bmy_12730T0/1-381 QCGPLPAASH PRPTLASPVF TAPAESEGSG PEEKSPGQQA PRPLLRKDVG ENSP00000327509/1-411 EEGPGDS--- -----ASPVF TAPAESEGPG PEEKSPGQQL PKATLRKDVG ENSBTAP00000011014/1-419 EEGPGDSASH SGPTLASPVF TAPAESEGSG PEEKSPGQQP PRPALRKDVG BACU007005/1-408 EEGPGDS--- --------VF TAPAESEGSG PEEKSPGQQA PRPLLRKDVG 301 350 bmy_12730T0/1-381 PMYSYVALYK FLPQENNDLA LQPGDRIMLV DDSNEDWWKG KIGDRVGFFP ENSP00000327509/1-411 PMYSYVALYK FLPQENNDLA LQPGDRIMLV DDSNEDWWKG KIGDRVGFFP ENSBTAP00000011014/1-419 PMYSYVALYK FLPQEKNDLA LQPGDRIMLV DDSNEDWWKG KIGDRVGFFP BACU007005/1-408 PMYSYVALYK FLPQENNDLA LQPGDRIMLV DDSNEDWWKG KIGDRVGFFP 351 400 bmy_12730T0/1-381 ANFVQRVRPG ENVWRCCQPF SGNKEQGYMS LKESQICVGV GRSKDADGFI ENSP00000327509/1-411 ANFVQRVRPG ENVWRCCQPF SGNKEQGYMS LKENQICVGV GRSKDADGFI ENSBTAP00000011014/1-419 ANFVQRVRPG ENVWRCCQPF SGNKEQGYMS LKENQICVGV GRSKDADGFI BACU007005/1-408 ANFVQRVRPG ENVWRCCQPF SGNKEQGYMS LKESQICVGV GRSKDADGFI 401 450 bmy_12730T0/1-381 RVSSGKKRGL VPANVLIEI ENSP00000327509/1-411 RVSSGKKRGL VPVDALTEI ENSBTAP00000011014/1-419 RVSSGKKRGL VPADALTEI BACU007005/1-408 RVSSGKKRGL VPANVLTEI