KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:42:47 2014 Check: 00 .. Name: ENSP00000297623/1-262 Len: 306 Check: 7274 Weight: 1.00 Name: ENSTTRP00000010046/1-261 Len: 306 Check: 5032 Weight: 1.00 Name: bmy_05689T0/1-206 Len: 306 Check: 6114 Weight: 1.00 Name: ENSBTAP00000011027/1-304 Len: 306 Check: 6481 Weight: 1.00 // 1 50 ENSP00000297623/1-262 MFLFSRKTRT PISTYSDSYR APTSIKEVYK DPPLCAWEAN KFLTPGLTHT ENSTTRP00000010046/1-261 MFLFSHKTKT PISTYSDSYK DPTSIKEGYK DPPLWAWEAN RFVTPGLTQT bmy_05689T0/1-206 MFLFSHKTKT PISTYSDSYR APTSIKEVYK DPPLWAWEAN RFVTPGLTQT ENSBTAP00000011027/1-304 MFLFSRKTKT PISTYSDSYR APTSIKEVYK DPPLWAWEAN KFVTPGLTHT 51 100 ENSP00000297623/1-262 MERHVDPEAL QKMAKCAVQD YTYRGSISGH PYLPEKYWLS QEEADKCSPN ENSTTRP00000010046/1-261 VQRHVDPEAQ QKTVKCAVQD YRYKNSIPGH PYLPEKYWLS QEEADKCNPN bmy_05689T0/1-206 VQRHVDPEAL QKMVKCAVQD YSYKSSIPGH PYLPEKYWLS QEE------- ENSBTAP00000011027/1-304 AQRHVDPDAL QKMLKCAVQD YSYKGSIPSH PYFPEKYWLC PEEADRCNPN 101 150 ENSP00000297623/1-262 YLGS------ -DWYNTWRME PYNSSCCNKY TTYLPRLPKE ARMETAVRGM ENSTTRP00000010046/1-261 HLCG------ -NQYNTWKMG PYNCTGWNKC ATYLPRLPKE AGMETVVRGM bmy_05689T0/1-206 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011027/1-304 YLCGNPNYLC SNQYNTWRMG PYN--CWNKC TTYLPRLPKE AGMETVVRGM 151 200 ENSP00000297623/1-262 PLECPPRPER LNAYEREVMV NMLNSLSRNQ QLPRITPRCG CVDPLPGRLP ENSTTRP00000010046/1-261 PLVYPPKPER LNAYEREVVV NMLNSLSRNK PLPEITPRCG CVDPLPGRLP bmy_05689T0/1-206 ---------- ----EREVVV NMLNSLSRKQ PLPQITPRCG CVDPLPGRLP ENSBTAP00000011027/1-304 PLVYPPKPER LNAYEREVVV NMLNSLSRNQ PLPQITPRCG CVDPLPGRLP 201 250 ENSP00000297623/1-262 FHGYESACSG RHYCLRGMDY YASGAPCTDR RLRPWCREQP T--------- ENSTTRP00000010046/1-261 CQGYESACSG RH-CLLGMDY CVAGPPCTER RLRLLRTERP T--------- bmy_05689T0/1-206 FQGYESGCSG RHYCLRGMDY CVAGPPCTER RLRLLRTERP TA-------- ENSBTAP00000011027/1-304 FQGYESACSG RHYCLRGMDY CVSGPPCTER RLRPLCTELP TVRSVSPCEH 251 300 ENSP00000297623/1-262 ---------- ---------- ---MCTSLRA PARNAVCCYN SPAVILPISE ENSTTRP00000010046/1-261 ---------- ---------- ---ECIALQA PAGNAMCCYN SPAVILPLSE bmy_05689T0/1-206 ---------- ---------- -RWDTSHFKK TGGPQRNNYV VHPEFVSETY ENSBTAP00000011027/1-304 RSGMQCAVIT PQPSYYPCPN LRWDTSHFKK TGGSQRNNYV VHPEFVSETY 301 350 ENSP00000297623/1-262 P----- ENSTTRP00000010046/1-261 P----- bmy_05689T0/1-206 PDYHCR ENSBTAP00000011027/1-304 PDYHCW