KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:49 2014 Check: 00 .. Name: bmy_21662T0/1-433 Len: 639 Check: 7773 Weight: 1.00 Name: ENSP00000456743/1-616 Len: 639 Check: 6807 Weight: 1.00 Name: ENSBTAP00000011036/1-615 Len: 639 Check: 4724 Weight: 1.00 Name: BACU004335/1-234 Len: 639 Check: 8529 Weight: 1.00 Name: ENSTTRP00000011379/1-616 Len: 639 Check: 8526 Weight: 1.00 // 1 50 bmy_21662T0/1-433 MNDLELLLHA QKSCSCRRAA ILFMMEGSRQ TRVSRPYKIS ESSKVYRWAE ENSP00000456743/1-616 ---------- ---------- ---MMEGSRQ TRVSRPYKIS ESSKVYRWAD ENSBTAP00000011036/1-615 ---------- ---------- ---MMEGSRQ TRVSRPYKIS ESSKVYRWAE BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 ---------- ---------- ---MMEGSRQ TRVSRPSKIS ESSKAFRWAD 51 100 bmy_21662T0/1-433 HSSTVLQRLN EQRLRGLFCD VVLVADEQRV PAHRNLLAVC SDYFNSMFTL ENSP00000456743/1-616 HSSTVLQRLN EQRLRGLFCD VVLVADEQRV PAHRNLLAVC SDYFNSMFTI ENSBTAP00000011036/1-615 HSGTVLQRLN EQRLRGLFCD VVLVADEQRL PAHRNLLAVC SDYFNSMFTL BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 HSSTVLQRLN EQRLRGLFCD VVLVADEQRV PAHRNLLAVC SDYFNSMFTL 101 150 bmy_21662T0/1-433 GMREAFQKEV ELIGASYIGL KAVVDFLYGG ELVLDGGNID YVLETAHLLQ ENSP00000456743/1-616 GMREAFQKEV ELIGASYIGL KAVVDFLYGG ELVLDGGNID YVLETAHLLQ ENSBTAP00000011036/1-615 GMREAFQKEV ELIGASYIGL KAVVDFLYGG ELVLDGGNID YVLETAHLLQ BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 GMREAFQKEV ELIGASYVGL KAVVDFLYGG ELVLDGGNID YVLETAHLLQ 151 200 bmy_21662T0/1-433 IWTAVDFCCE YLEQEVSEDN YLYLQELASI YSLRRLDAFI DGFILGRFGT ENSP00000456743/1-616 IWTVVDFCCE YLEQEVSEDN YLYLQELASI YSLKRLDAFI DGFILNHFGT ENSBTAP00000011036/1-615 IWTAVDFCCE YLEQEVSEDN YLYLQELASI YSLKRLDAFI DSFILSRFGT BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 IWTVVDFCCE YLEQEVSEDN YLYLQKLASI YSLRRLDAFL DGFILSRFGT 201 250 bmy_21662T0/1-433 LSFTPDFLQN VSLQKLCAYL GSSEVQRECE HDLLQAALQW LTQQPEREAH ENSP00000456743/1-616 LSFTPDFLQN VSMQKLCVYL SSSEVQRECE HDLLQAALQW LTQQPEREAH ENSBTAP00000011036/1-615 LSFTPAFLQN ISMQKLCAYL GSSEVQRECE HDLLQ-ALQW LTQQPEREAH BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 LSFTPDFLQN VSVQKLCAYL GSSQVQRECE HDLLQAALQW LTQRPEREAH 251 300 bmy_21662T0/1-433 AHQVLENIHF PLIPKNDLLH RVKPAVCSLL PREANCEGFI EEAVRYHNSL ENSP00000456743/1-616 ARQVLENIHF PLIPKNDLLH RVKPAVCSLL PKEANCEGFI EEAVRYHNNL ENSBTAP00000011036/1-615 AYQVLENIHF PLIPKNDLLH RVKPAVCSLL PREANCEGFI EEAVRYHNSL BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 AYQVLENIHF PLIPKNDLLH RVKPAVCSLL PREANCEGFI EEAVRYHNSL 301 350 bmy_21662T0/1-433 AAQPVMQTKR TALRTTQACL LFVGGEVSER CLELSDDTCY LDAQSEQWVK ENSP00000456743/1-616 AAQPVMQTKR TALRTNQERL LFVGGEVSER CLELSDDTCY LDAKSEQWVK ENSBTAP00000011036/1-615 AAQPVMQTKR TALRTTQECL LFVGGEVSER CLELSDDTCY LDAQSEQWVK BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 AAQPVMQTKR TALRTTQECL LFVGGEVSER CLELSDDTCY LDAQSEQWVK 351 400 bmy_21662T0/1-433 ETPLPARRSH HCVAVLGGFI FIAGGSFSRD NGGDAASNLL YRYDPRCKQW ENSP00000456743/1-616 ETPLPARRSH HCVAVLGGFI FIAGGSFSRD NGGDAASNLL YRYDPRCKQW ENSBTAP00000011036/1-615 ETPLPARRSH HCVAVLGGFI FIAGGSFSRD NGGDAASNLL YRYDPRCKQW BACU004335/1-234 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011379/1-616 ETPLPARRSH HCVAVLGGFI FIAGGSFSRD NGGDAASNLL YRYDPRCKQW 401 450 bmy_21662T0/1-433 IKV----RLK PDYFF----- ---------- ---------- ---------- ENSP00000456743/1-616 IKVASMNQRR VDFYLASIED MLVAIGGRNE NGALSSVETY SPKTDSWSYV ENSBTAP00000011036/1-615 IKVASMNQRR VDFYLASIED MLVAVGGRNE NGALSSVETY SPKTDSWSYV BACU004335/1-234 -----MNQRR VDFYLASIED MLVAVGGRNE NGALSSVETY SPKTDSWSYV ENSTTRP00000011379/1-616 IKVASMNQRR VDFYLASIED MLVAVGGRNE NGALSSVETY SPKTDSWSYV 451 500 bmy_21662T0/1-433 ---------- ---------- ---------- ---------- ---------- ENSP00000456743/1-616 AGLPRFTYGH AGTIYKDFVY ISGGHDYQIG PYRKNLLCYD HRTDVWEERR ENSBTAP00000011036/1-615 AGLPRFTYGH AGTIYKDFVY ISGGHDYQIG PYRKNLLCYD HRTDVWEERR BACU004335/1-234 AGLPRFTYGH AGTIYKDFVY ISGGHDYQIG PYRKNLLCYD HRTDVWEERR ENSTTRP00000011379/1-616 AGLPRFTYGH AGTIYKDFVY ISGGHDYQIG PYRKNLLCYD HRTDVWEERR 501 550 bmy_21662T0/1-433 ---------- ---------- ---------T LEDFYLLNLS LDCPP----- ENSP00000456743/1-616 PMTTARGWHS MCSLGDSIYS IGGSDDNIES MERFDVLGVE AYSPQCNQWT ENSBTAP00000011036/1-615 PMSTARGWHS MCSLGDSIYS IGGSDDSLES MERFDVLGVE AYSPQCNQWT BACU004335/1-234 PMTTARGWHS MCSLGDSIYS IGGSDDSLES MERFDVLGVE AYSPQCNQWT ENSTTRP00000011379/1-616 PMTTARGWHS MCSLGDSIYS IGGSDDSLES MERFDVLGVE AYSPQCNQWT 551 600 bmy_21662T0/1-433 ---------- ---------- ---------- ---------- ---------- ENSP00000456743/1-616 RVAPLLHANS ESGVAVWEGR IYILGGYSWE NTAFSKTVQV YDREADKWSR ENSBTAP00000011036/1-615 RVAPLLHANS ESGVAVWEGR IYILGGYSWE NTAFSKTVQV YDRDKDKWSE BACU004335/1-234 RVAPLLHANS ESGVAVWEGR IYILGGYSWE NTAFSKTVQV YDREQDKWSK ENSTTRP00000011379/1-616 RVAPLLHANS ESGVAVWEGR IYILGGYSWE NTAFSKTVQV YDREKDKWSK 601 650 bmy_21662T0/1-433 ---------- ---------- ---------- ---PPSLGP ENSP00000456743/1-616 GVDLPKAIAG GSACVCALEP RPEDKKKKGK GKRHQDRGQ ENSBTAP00000011036/1-615 GTELPKAIAG VSACVCALKP RLEDKKKKGK GKRPQDHGQ BACU004335/1-234 GTDLPKAIAG VSACVCALKP RLEDKKKKGK GKRPQDRGQ ENSTTRP00000011379/1-616 GTDLPKAIAG VSACVCALKP RLEDKKKKGK GKRPQDRGQ