KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:49 2014 Check: 00 .. Name: ENSP00000300107/1-633 Len: 634 Check: 1035 Weight: 1.00 Name: ENSTTRP00000004708/1-634 Len: 634 Check: 5132 Weight: 1.00 Name: ENSBTAP00000011038/1-607 Len: 634 Check: 2283 Weight: 1.00 Name: bmy_12706T0/1-598 Len: 634 Check: 4929 Weight: 1.00 Name: BACU001065/1-633 Len: 634 Check: 9552 Weight: 1.00 // 1 50 ENSP00000300107/1-633 -MPSCGACTC GAAAVRLITS SLASAQRGIS GGRIHMSVLG RLGTFETQIL ENSTTRP00000004708/1-634 MSXXXXXXXX XXXXXXXXXX XXXXXXXXIS CGRIHIPVLG RLGTFETQLL ENSBTAP00000011038/1-607 ---------- ---------- -------GIS CSRIHIPVLG RLGTFETQLL bmy_12706T0/1-598 -MSGCGACTC GATAARLISS SLASAPRGIS CGRIHIPVLG RLGTFETQLL BACU001065/1-633 -MSGCGACTC GATAARLISS SLASAPRGIS CGRIHIPVLG RLGTFETLLL 51 100 ENSP00000300107/1-633 QRAPLRSFTE TPAYFASKDG ISKDGSGDGN KKSASEGSSK KSGSGNSGKG ENSTTRP00000004708/1-634 RRAPFRAFTE TPAYFASKDG MSKDGSGDGN KKSASEGSSK KSGSGNSGKG ENSBTAP00000011038/1-607 RRAPFRAFTE TPAYFASRDG ISKDGSGDGN KKSASEGSSK KSGSGNSGKG bmy_12706T0/1-598 RRAPFRAFTE TPAYFASKDG MSKDGSGDGN KKSASEGSSK KSGSGNSGKG BACU001065/1-633 RRAPFRAFTE TPAYFASKDG MSKDGSGDGN KKSASEGSSK KSGSGNSGKG 101 150 ENSP00000300107/1-633 GNQLRCPKCG DLCTHVETFV SSTRFVKCEK CHHFFVVLSE ADSKKSIIKE ENSTTRP00000004708/1-634 GNQLRCPKCG DLCTHVETFV SSTRFVKCEK CHHFFVVLSE ADSKKSIIKE ENSBTAP00000011038/1-607 GNQLRCPKCG DLCTHVETFV SSTRFVKCEK CHHFFVVLSE ADSKKSIIKE bmy_12706T0/1-598 GNQLRCPKCG DLCTHVETFV SSTRFVKCEK CHHFFVVLSE ADSKKSIIKE BACU001065/1-633 GNQLRCPKCG DLCTHVETFV SSTRFVKCEK CHHFFVVLSE ADSKKSIIKE 151 200 ENSP00000300107/1-633 PESAAEAVKL AFQQKPPPPP KKIYNYLDKY VVGQSFAKKV LSVAVYNHYK ENSTTRP00000004708/1-634 PESAAEAVKL AFQQKPPPPP KKIYNYLDKY VVGQSFAKKV LSVAVYNHYK ENSBTAP00000011038/1-607 PESAAEAVKL AFQQKPPPPP KKIYNYLDKY VVGQSFAKKV LSVAVYNHYK bmy_12706T0/1-598 PESAAEAVKL AFQQKPPPPP KKIYNYLDKY VVGQSFAKKV LSVAVYNHYK BACU001065/1-633 PESAAEAVKL AFQQKPPPPP KKIYNYLDKY VVGQSFAKKV LSVAVYNHYK 201 250 ENSP00000300107/1-633 RIYNNIPANL RQQAEVEKQT SLTPRELEIR RREDEYRFTK LLQIAGISPH ENSTTRP00000004708/1-634 RIYNNIPANV RQQAEVEKQT SLTPRELEIR RREDEYRFTK LLQIAGISPH ENSBTAP00000011038/1-607 RIYNNIPANL RQQAEVEKQT SLTPRELEIR RREDEYRFTK LLQIAGISPH bmy_12706T0/1-598 RIYNNIPANV RQQAEVEKQT SLTPRELEIR RREDEYRFTK LLQIAGISPH BACU001065/1-633 RIYNNIPANV RQQAEVEKQT SLTPRELEIR RREDEYRFTK LLQIAGISPH 251 300 ENSP00000300107/1-633 GNALGASMQQ QVNQQIPQEK RGGEVLDSSH DDIKLEKSNI LLLGPTGSGK ENSTTRP00000004708/1-634 GNALGASMQQ QVNQQIPQEK RGGEVLDSSH DDIKLEKSNI LLLGPTGSGK ENSBTAP00000011038/1-607 GNALGASVQQ QVNQQIPQEK RGGEVLDSSH DDIKLEKSNI LLLGPTGSGK bmy_12706T0/1-598 GNALGASMQQ QVNQQIPQEK RGGEVLDSSH DDIKLEKSNI LLLGPTGSGK BACU001065/1-633 GNALGASMQQ QVNQQIPQEK RGGEVLDSSH DDIKLEKSNI LLLGPTGSGK 301 350 ENSP00000300107/1-633 TLLAQTLAKC LDVPFAICDC TTLTQAGYVG EDIESVIAKL LQDANYNVEK ENSTTRP00000004708/1-634 TLLAQTLAKC LDVPFAICDC TTLTQAGYVG EDIESVIAKL LQDANYNVEK ENSBTAP00000011038/1-607 TLLAQTLAKC LDVPFAICDC TTLTQAGYVG EDIESVIAKL LQDANYNVEK bmy_12706T0/1-598 TLLAQTLAKC LDVPFAICDC TTLTQAGYVG EDIESVIAKL LQDANYNVEK BACU001065/1-633 TLLAQTLAKC LDVPFAICDC TTLTQAGYVG EDIESVIAKL LQDANYNVEK 351 400 ENSP00000300107/1-633 AQQGIVFLDE VDKIGSVPGI HQLRDVGGEG VQQGLLKLLE GTIVNVPEKN ENSTTRP00000004708/1-634 AQQGIVFLDE VDKIGSVPGI HQLRDVGGEG VQQGLLKLLE GTIVNVPEKN ENSBTAP00000011038/1-607 AQQGIVFLDE VDKIGSVPGI HQLRDVGGEG VQQGLLKLLE GTIVNVPEKN bmy_12706T0/1-598 AQQGIVFLDE VDKIGSVPGI HQLRDVGGEG VQQGLLKLLE GTIVNVPEKN BACU001065/1-633 AQQGIVFLDE VDKIGSVPGI HQLRDVGGEG VQQGLLKLLE GTIVNVPEKN 401 450 ENSP00000300107/1-633 SRKLRGETVQ VDTTNILFVA SGAFNGLDRI ISRRKNEKYL GFGTPSNLGK ENSTTRP00000004708/1-634 SRKLRGETVQ VDTTNILFVA SGAFNGLDRI ISRRKNEKYL GFGTPSNLGK ENSBTAP00000011038/1-607 SRKLRGETVQ VDTTNILFVA SGAFNGLDRI ISRRKNEKYL GFGTPSNLGK bmy_12706T0/1-598 SRKLRGETVQ VDTTNIL--- ---------- ---------- ---------- BACU001065/1-633 SRKLRGETVQ VDTTNILFVA SGAFNGLDRI ISRRKNEKYL GFGTPSNLGK 451 500 ENSP00000300107/1-633 GRRAAAAADL ANRSGESNTH QDIEEKDRLL RHVEARDLIE FGMIPEFVGR ENSTTRP00000004708/1-634 GRRAAAAADL ANRSGESNTH QDIEEKDRLL RHVEARDLIE FGMIPEFVGR ENSBTAP00000011038/1-607 GRRAAAAADL ANRSGESNTH QDIEEKDRLL RHVEARDLIE FGMIPEFVGR bmy_12706T0/1-598 --RAAAAADL ANRSGESNTH QDIEEKDRLL RHVEARDLIE FGMIPEFVGR BACU001065/1-633 GRRAAAAADL ANRSGESNTH QDIEEKDRLL RHVEARDLIE FGMIPEFVGR 501 550 ENSP00000300107/1-633 LPVVVPLHSL DEKTLVQILT EPRNAVIPQY QALFSMDKCE LNVTEDALKA ENSTTRP00000004708/1-634 LPVVVPLHSL DEKTLVQILT EPRNAVIPQY QALFSMDKCE LNVTEDALKA ENSBTAP00000011038/1-607 LPVVVPLHSL DEKTLVQILT EPRNAVIPQY QALFSMDKCE LNVTEDALKA bmy_12706T0/1-598 LPVVVPLHSL DEKTLVQILT EPRNAVIPQY QALFSMDKCE LNVTEDALKA BACU001065/1-633 LPVVVPLHSL DEKTLVQILT EPRNAVIPQY QALFSMDKCE LNVTEDALKA 551 600 ENSP00000300107/1-633 IARLALERKT GARGLRSIME KLLLEPMFEV PNSDIVCVEV DKEVVEGKKE ENSTTRP00000004708/1-634 IARLALERKT GARGLRSIME KLLLEPMFEV PNSDIVCVEV DKEVVEGKKE ENSBTAP00000011038/1-607 IARLALERKT GARGLRSIME KLLLEPMFEV PNSDIVCVEV DKEVVEGKKE bmy_12706T0/1-598 IARLALERKT GARGLRSIME KLLLEPMFEV PNSDIVCVEV DKEVVEGKKE BACU001065/1-633 IARLALERKT GARGLRSIME KLLLEPMFEV PNSDIVCVEV DKEVVEGKKE 601 650 ENSP00000300107/1-633 PGYIRAPTKE SSEEEYDSGV EEEGWPRQAD AANS ENSTTRP00000004708/1-634 PGYIRAPTKE SSEEEYDSGV EEEGWPRQAD AANS ENSBTAP00000011038/1-607 PGYIRAPTKE SSEEEYDSGV EEEGWPRQAD AANS bmy_12706T0/1-598 PGYIRAPTKE SSEEEYDSGV EEEGWPRQAD AANS BACU001065/1-633 PGYIRAPTKE SSEEEYDSGV EEEGWPRQAD AANS