KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:50 2014 Check: 00 .. Name: bmy_05622T0/1-258 Len: 264 Check: 255 Weight: 1.00 Name: ENSBTAP00000011047/1-199 Len: 264 Check: 1516 Weight: 1.00 Name: ENSP00000379210/1-195 Len: 264 Check: 3656 Weight: 1.00 Name: BACU002443/1-205 Len: 264 Check: 6820 Weight: 1.00 Name: ENSTTRP00000014998/1-197 Len: 264 Check: 8519 Weight: 1.00 // 1 50 bmy_05622T0/1-258 MAPKKPEPKK DEAKAAAKTA PAPTPAPAPA PVPEPPKEPE FDASKVKVGV ENSBTAP00000011047/1-199 MAPKKPDPKK DEAKAGAKAA AAPAPAPAPP PAPEPSKEPE FDPSKIKIEF ENSP00000379210/1-195 MAPKKPEPKK DDAKAAPKAA ----PAPAPP PEPERPKEVE FDASKIKIEF BACU002443/1-205 MAPKKPDPKK DEAKAAAKAA PAPTPAPAPA PVPEPPKEPE FDASKVKIEF ENSTTRP00000014998/1-197 MAPKKPEPKK DDAKAGAKAA PA--PAPAPA PVPEPPKEPE FDASKVKIEF 51 100 bmy_05622T0/1-258 GAGFRWEGQG RSSLHRSRLK VSGGLEPGAA GLGLGSPRLR VLPCSVGRVG ENSBTAP00000011047/1-199 T--------- ---------- ------PEQI ---------- ---------- ENSP00000379210/1-195 T--------- ---------- ------PEQI ---------- ---------- BACU002443/1-205 T--------- ---------- ------PEQI ---------- ---------- ENSTTRP00000014998/1-197 T--------- ---------- ------PEQI ---------- ---------- 101 150 bmy_05622T0/1-258 GADSRSVRSS RPLPAEFKEA FTLYDRTPKS EMKITYGQCG DVLRALGQNP ENSBTAP00000011047/1-199 ---------- ----EEFKEA FTLFDRTPKC EMKITYGQCG DVLRALGQNP ENSP00000379210/1-195 ---------- ----EEFKEA FMLFDRTPKC EMKITYGQCG DVLRALGQNP BACU002443/1-205 ---------- ----EEFKEA FTLYDRTPKC EMKITYGQCG DVLRALGQNP ENSTTRP00000014998/1-197 ---------- ----EEFKEA FMLYDRTPKC EMKITYGQCG DVLRALGQNP 151 200 bmy_05622T0/1-258 TQAEVLRVLG KPKQEELNYK MMDFDTFLPM LQHISKNKDT GTYEDFVEGL ENSBTAP00000011047/1-199 TQAEVLRVLG KPKQEELNSK MMDFDTFLPM LQHISKNKDT GTYEDFVEGL ENSP00000379210/1-195 TQAEVLRVLG KPRQEELNTK MMDFETFLPM LQHISKNKDT GTYEDFVEGL BACU002443/1-205 TQAEVLRVLG KPKQEELNSK MMDFDTFLPM LQHISKNKDT GTYEDFVEGL ENSTTRP00000014998/1-197 TQAEVLRVLG KPKQEELNSK MMDFDTFLPM LQHISKNKDT GTFEDFVEGL 201 250 bmy_05622T0/1-258 RVFDKEGNGT VMGAELRHVL ATLGERLTED EVEKLMAGQE DSNGCINYKA ENSBTAP00000011047/1-199 RVFDKEGNGT VMGAELRHVL ATLGEKLTED EVEKLMAGQE DSNGCINYEA ENSP00000379210/1-195 RVFDKEGNGT VMGAELRHVL ATLGERLTED EVEKLMAGQE DSNGCINYEA BACU002443/1-205 RVFDKEGNGT VMGAELRHVL ATLGERLTED EVEKLMAGQE DSNGCINYKG ENSTTRP00000014998/1-197 RVFDKEGNGT VMGAELRHVL ATLGERLTED EVEKLMAGQE DSNGCVNYKA 251 300 bmy_05622T0/1-258 FVKH---IMT S--- ENSBTAP00000011047/1-199 FVKH---IMA G--- ENSP00000379210/1-195 FVKH---IMS S--- BACU002443/1-205 KLSRAGSLLA GAGH ENSTTRP00000014998/1-197 FVTH---IMS S---