KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:51 2014 Check: 00 .. Name: ENSP00000315136/1-575 Len: 638 Check: 9575 Weight: 1.00 Name: bmy_15766T0/1-602 Len: 638 Check: 7240 Weight: 1.00 Name: ENSBTAP00000011048/1-578 Len: 638 Check: 5085 Weight: 1.00 Name: BACU006478/1-587 Len: 638 Check: 9269 Weight: 1.00 Name: ENSTTRP00000004150/1-384 Len: 638 Check: 4778 Weight: 1.00 // 1 50 ENSP00000315136/1-575 MDFPTISRSP SGPPAMDLEG PRDILVPSED LTPDSQWDPM PGGPGSLSRM bmy_15766T0/1-602 MEFLTTSQPP PGPPAMDLEE PRDTLSPSQD LTPDCQWHPA PGGPGSLSQM ENSBTAP00000011048/1-578 MEFLTVSQPP PGPPAMDLEE PRDTLLPSQD LTRDCQWDPT PGGSSSLSQM BACU006478/1-587 ---------- -----MDLEE PRDTLSPSQD LTPDCQWDPA PGGPSNLSQM ENSTTRP00000004150/1-384 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000315136/1-575 ELDESSLQEL VQQFEALPGD LVGPSPGGAP CPLHIATGHG LASQEIADAH bmy_15766T0/1-602 ELDGLNIQDL LQQFEALPGD LVGLSPDGPP CPLHIATGHG LAPQDITDAH ENSBTAP00000011048/1-578 ELDGLNIQDL VQQFEALPGD LVGLSPDGPP CPLHIATGHG LAPRDMADAH BACU006478/1-587 ELDGLNIQDL LQQFEALPGD LVGLSPDGPP CPLHIATGHG LAPQDITDAH ENSTTRP00000004150/1-384 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000315136/1-575 GLLSAEAGRD DLLGLLHCEE CPPSQTGPEE PLEPAPRLLQ PPEDPDEDSD bmy_15766T0/1-602 GLLSAEAGRE DLLSLLQQDE RSPSQSGPQE PPDPAPRLLQ PPDDPEGDMG ENSBTAP00000011048/1-578 GLLSAEADRE DLLNLLQQDE GPPSLPGSQK PPDPAPRLLQ PPEDPEEDTG BACU006478/1-587 GLLSAEAGRE DLLSLLQQDE CPPSQSGPQE PPDPAPHLLQ PPDDPEGDMG ENSTTRP00000004150/1-384 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000315136/1-575 SPEWVEGASA EQEGSRSSSS SPEPWLETVP LVTPEEPPAG AQSPETLASY bmy_15766T0/1-602 PQEWAEGASV EQDEGRSSSS SPEPWLETVP LVTSEEPPAS AQSPKTLASY ENSBTAP00000011048/1-578 PQEWTEGASA EQDEDRSSNS SPEPWLETSP LVTPEEPPAS VQRPKTLASY BACU006478/1-587 PQEWAEGASV EQDEGRSSSS SPEPWLETVP LVTSEEPPAS AQSPKTLASY ENSTTRP00000004150/1-384 ---------- ---------- ---------- ---------- --SPETLAS- 201 250 ENSP00000315136/1-575 PAPQEVPGPC DHEDLLDGVI FGARYLGSTQ LVSERNPPTS TRMAQAREAM bmy_15766T0/1-602 PALQEVSGPC DHEDLLDGVI FGAKYLGSTQ LVSERNPPPR TRMAQAQEAM ENSBTAP00000011048/1-578 PALQEVSGPC DHEDLLDGVI FGAKYLGSTQ LVSERNPPPS TRMAQAQEAM BACU006478/1-587 PALQEVSGPC DHEDLLDGVI FGAKYLGSTQ LVSERNPPPS TRMAQAQEAM ENSTTRP00000004150/1-384 PAL-EASGPC DHEDLLDGVI FGAKYLGSTQ LVSERNPPPS TRMAQAQEAM 251 300 ENSP00000315136/1-575 DRVKAPDGET QPMTEVDLFV STKRIKVLTA DSQEAMMDHA LHTISYTADI bmy_15766T0/1-602 DRVKAPDGET QPMTEVDLFV STKRVKVLTA DSQEALMDHA LQTISYIADI ENSBTAP00000011048/1-578 DRVKAPDGES QPMTEVDLFV STKRVKVLMT DSQEAMMDHA LQTISYIADI BACU006478/1-587 DRVKAPDGET QPMTEVDLFV STKRVKVLTA DSQEALMDHA LQTISYIADI ENSTTRP00000004150/1-384 DRVKAPDGET QPMTEVDLFV STKRVKVLTA DSQEALMDHA LQTISYIADI 301 350 ENSP00000315136/1-575 GCVLVLMARR RLARRPAPQD HGRRLYKMLC HVFYAED--- ---------- bmy_15766T0/1-602 GSVLVLMARR RMARRPAPQP HSRRLYKMIC HVFHSED--- ---------- ENSBTAP00000011048/1-578 GSTLVLMARR RLAQRPAAQP HSRRLYKMIC HVFQSED--- ---------- BACU006478/1-587 GSVLVLMARR RLARRPAPQP HSRRLYKMIC LLFHSEDGCQ WLGGDLKEVG ENSTTRP00000004150/1-384 GSILVLMARR RLARRPAPQP HSRRLYKMIC HVFHSED--- ---------- 351 400 ENSP00000315136/1-575 ---------- -AQLIAQAIG QAFAAAYSQF LRESGIDPSQ VGVHPSPGAC bmy_15766T0/1-602 ---------- -AQLIAQAIG QAFAVAYSQF LRESGINPSQ VGSQQSQGTT ENSBTAP00000011048/1-578 ---------- -AQLIAQAIG QAFAVAYSQF LRESGIDPSQ VGTQQSQGAM BACU006478/1-587 GTPREVPPTP EAQLIAQAIG QAFAVAYSQF LRESGINPSQ VGSQQSQGAT ENSTTRP00000004150/1-384 ---------- -AQLIAQAIG QAFAVAYSQF LRESGINPSQ VGSQQSQGAT 401 450 ENSP00000315136/1-575 ---HLHNGDL DHFSNSDNCR EVHLEKRRGE GLGVALVESG WGSLLPTAVI bmy_15766T0/1-602 GPGHLHNGDL DHFSNSENCR EVSKRVPPPR PTECASRSAG VRV------- ENSBTAP00000011048/1-578 GPGHLHNGDL DHFSNSENCR EVFIEKRRGE GLGVALVESG WGSLLPTAVI BACU006478/1-587 GPGHLHNGDL DHFSNSENCR EVCIEKRRGE GLGVALVESG WGSLLPTAVI ENSTTRP00000004150/1-384 GPGHLHNGDL DHFSNSENCR EVCIEKRRGE GLGVALVESG WGSLLPTAVI 451 500 ENSP00000315136/1-575 ANLLHGGPAE RSGALSIGDR LTAINGTSLV GLPLAACQAA VR-------- bmy_15766T0/1-602 -----GGPAE RSGALSIGDR ITAINGTSLV GLPLAACQAA VRVPFYEWVN ENSBTAP00000011048/1-578 ANLLHGGPAE RSGALSIGDR ITAINGTSLV GLPLAACQAA VR-------- BACU006478/1-587 ANLLHGGPAE RSGALSIGDR ITAINGTSLV GLPLAACQAA VR-------- ENSTTRP00000004150/1-384 ANLLHGGPAE RSGALSIGDR ITAINGTSLV GLPLAACQAA VR-------- 501 550 ENSP00000315136/1-575 ---------- ---------- --------ET KSQTSVTLSI VHCPPVTTAI bmy_15766T0/1-602 RPRRGCSSTG SLAAPRRPSQ VNSPHPAQEV KSQTLVTLSI VHCPPVTTAI ENSBTAP00000011048/1-578 ---------- ---------- --------EV KSQTLVTLSI VHCPPVTTAI BACU006478/1-587 ---------- ---------- --------EV KSQTLVTLSI VHCPPVTTAI ENSTTRP00000004150/1-384 ---------- ---------- --------EV KSQTLVTLSI VHCPPVTTAI 551 600 ENSP00000315136/1-575 IHRPHAREQL GFCVEDGIIC SLLRGGIAER GGIRVGHRII EINGQSVVAT bmy_15766T0/1-602 IRRPHVREQL GFCVEDGIIC SLLRGGIAER GGVRVGHRII EINGQSVVAT ENSBTAP00000011048/1-578 IRRPHVREQL GFCVEDGIIC SLLRGGIAER GGVRVGHRII EINGHSVVAT BACU006478/1-587 IRRPHVREQL GFCVEDGIIC SLLRGGIAER GGVRVGHRII EINGQSVVAT ENSTTRP00000004150/1-384 IRRPHVREQL GFCVEDGIIC SLLRGGIAER GGVRVGHRII EINGQSVVAT 601 650 ENSP00000315136/1-575 PHARIIELLT EAYGEVHIKT MPAATYRLLT GQEQPVYL bmy_15766T0/1-602 PHARIIELLT EAHIEVHIKT MPAATYRLLT GQEQPVYL ENSBTAP00000011048/1-578 PHARIIELLT EAHIEVHIKT MPAATYRLLT GQEQPVYL BACU006478/1-587 PHARIIELLT EAHIEVHIKT MPAATYRLLT GQEQPVYL ENSTTRP00000004150/1-384 PHARIIELLT EAHIEVHIKT MPAATYRLLT GQEQPVYL