KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:42:58 2014 Check: 00 .. Name: ENSP00000330032/1-310 Len: 423 Check: 3662 Weight: 1.00 Name: ENSTTRP00000011421/1-294 Len: 423 Check: 6176 Weight: 1.00 Name: ENSBTAP00000011088/1-309 Len: 423 Check: 849 Weight: 1.00 Name: bmy_22235T0/1-422 Len: 423 Check: 5958 Weight: 1.00 Name: BACU007402/1-282 Len: 423 Check: 7230 Weight: 1.00 // 1 50 ENSP00000330032/1-310 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011421/1-294 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011088/1-309 ---------- ---------- ---------- ---------- ---------- bmy_22235T0/1-422 MSGDLGQSSL SPTSLLPAGR KPQGGVVGGA TGFMSNLLVT RRRPLRNKKP BACU007402/1-282 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000330032/1-310 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011421/1-294 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011088/1-309 ---------- ---------- ---------- ---------- ---------- bmy_22235T0/1-422 GGGGAGAPGG EGPREGRRRW RAGGDPRAAL LHSLAGSSRH ASGATPGGPC BACU007402/1-282 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000330032/1-310 ---------- ---MAATGAN AEKAESHNDC PVRLLNPNIA KMKEDILYHF ENSTTRP00000011421/1-294 ---------- ---------- --------DF -VQLCNPHVA AMKEDVLYHF ENSBTAP00000011088/1-309 ---------- ---MASTAAE TEKPEDHNDL -VQLCNPHIA AMKEDILYHF bmy_22235T0/1-422 AGSVCGQRPV FGDHRPAGAE TKKPGNHNDF -VQLCNPHVA AMKEDVLYHF BACU007402/1-282 ---------- ---------- ---------- ---------- -MKEDVLYHF 151 200 ENSP00000330032/1-310 NLTTSRHNFP ALFGDVKFVC VGGSPSRMKA FIRCVGAELG LDCPGRDYPN ENSTTRP00000011421/1-294 SLSTSTHDFP TMFGDVKFVC VGGSPSRMKA FIKYMAVELG LDHPGAEYPD ENSBTAP00000011088/1-309 SLSTSTHDFP AMFGDVKFVC VGGSPSRMKA FIKYVAMELG FAHPGADYPN bmy_22235T0/1-422 SLSTGTHDFP TMFGDVKFVC VGGSPSRMKA FSKYVAMELG LDHPGADYPN BACU007402/1-282 SLSTGTHDFP TMFGDVKFVC VGGSSSRMKA FSKYVAVELG LDHPGADYPN 201 250 ENSP00000330032/1-310 ICAGTDRYAM YKVGPVLSVS HGMGIPSISI MLHELIKLLY YARCSNVTII ENSTTRP00000011421/1-294 ICEGTDRYAM FKVGPVLSVS HGMGIPSIAI MLHELIKLLY HARCSDITLI ENSBTAP00000011088/1-309 ICEGTDRYAM FKVGPVLSVS HGMGVPSIAI MLHELIKLLY HARCSGVTLI bmy_22235T0/1-422 ICEGTDRYAM FKVGPVLLVS HGMGIPSIAI MLHELIKLLY HARCSGVTLI BACU007402/1-282 ICEGTDRYAM FKVGPVLLVS HGMGIPSIAI MLHELIKLLY HARCSGVTLI 251 300 ENSP00000330032/1-310 RIGTSGGIGL EPGTVVITEQ AVDTCFKAEF EQIVLGKRVI RKTDLNKKLV ENSTTRP00000011421/1-294 RIGTSGGIGL EPGSVVITRQ AVDGCFKQEF EQIVLGKRVV RNTHLDDWLV ENSBTAP00000011088/1-309 RIGTSGGIGL EPGSVVITRQ AVDPCFKPEF EQIVLGKREV RNTDLDEQLV bmy_22235T0/1-422 RIGTSGGIGL EPGSVVITRQ PVDACFKQEF EQIVLGKRVV RNTHLDERLV BACU007402/1-282 RIGTSGGIGL EPGSVVITRQ AVDACFKQEL EQIVLGKRVV RNTHLDERLV 301 350 ENSP00000330032/1-310 QELLLCSAEL SEFTTVVGNT MCTLDFYEGQ GRLDGALCSY TEKDKQAYLE ENSTTRP00000011421/1-294 QELVRCSADL GEFPTVVGNT MCTLDFYEGQ GRLDGALCSY AEKDKQEYLR ENSBTAP00000011088/1-309 QELARCSAEL GEFPTVVGNT MCTLDFYEGQ GRLDGALCSY TEKDKQEYLR bmy_22235T0/1-422 QELARCSADL GEFPTVVGNT MCTLDFYEGQ GRLDGALCSY SEKDKQEYLR BACU007402/1-282 QELVRCSTDL GEFPTVVGNT MCTLDFYEGQ GRLDGALCSY SEKDKQEYLR 351 400 ENSP00000330032/1-310 AAYAAGVRNI EMESSVFAAM CSACGLQAAV VCVTLLNRLE GDQISSPRNV ENSTTRP00000011421/1-294 AAYEAGIRNX XXXXXXXXXX XXXXXPQAAV VCVTLLNRLE GDQISSPHEV ENSBTAP00000011088/1-309 AAYAAGIRNI EMEASVFAAM CNACGLRAAV VCVTLLNRLE GDQISSPHEV bmy_22235T0/1-422 AAYEAGVRNI EMESSVFAAI CNACGLRAAV VCVTLLNRLE GDQISSSHEV BACU007402/1-282 AAYEAGIRNI EMESTVFAAI CNACGLRAAV VCVTLLNRLE GDQISSPHEV 401 450 ENSP00000330032/1-310 LSEYQQRPQR LVSYFIKKKL SKA ENSTTRP00000011421/1-294 LVEYQQRPQR LVGHFIKKCL AAS ENSBTAP00000011088/1-309 LAEYQQRPQR LVGQFIKKRL MQA bmy_22235T0/1-422 LAEYQQRPQR LVGHFIKKCL AAA BACU007402/1-282 LAEYQQRPQR LVAHFIKKCL AAA