KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:01 2014 Check: 00 .. Name: ENSP00000278243/1-315 Len: 321 Check: 9228 Weight: 1.00 Name: ENSBTAP00000011097/1-254 Len: 321 Check: 6259 Weight: 1.00 Name: bmy_03650T0/1-305 Len: 321 Check: 8968 Weight: 1.00 Name: BACU004954/1-305 Len: 321 Check: 9215 Weight: 1.00 Name: ENSTTRP00000015782/1-315 Len: 321 Check: 321 Weight: 1.00 // 1 50 ENSP00000278243/1-315 ------MYQV PLPLDRDGTL VRLRFTMVAL VTVCCPLVAF LFCILWSLLF ENSBTAP00000011097/1-254 ------MYQV PLPLDRDGTL VRLRFTLVAL VTVCCPLVAF LFCVLWSLLF bmy_03650T0/1-305 MPGSDKMYQV PLPLDRDGTL VRLRFTLVAL VTVCCPLVAF LFCVLWSLLF BACU004954/1-305 MPGSDKMYQV PLPLDRDGTL VRLRFTLVAL VTVCCPLVAF LFCVLWSLLF ENSTTRP00000015782/1-315 ------MYEV PLPLDRDGTL VRLRFTLVAL VTVCCPLVAF LFCVLWSLLF 51 100 ENSP00000278243/1-315 HFKETTATHC GATPCRMFSA ASQPLDPDGT LFRLRFTAMV WWAITFPVFG ENSBTAP00000011097/1-254 HFKETTATHC G--------- ---------- ---------- ---------- bmy_03650T0/1-305 HFKETTATHC G--------- ---PLDPDGT VFRLRFTAMV WWVITFPVFG BACU004954/1-305 HFKETTATHC G--------- ---PLDPDGT VFRLRFTAMV WWVITFPVFG ENSTTRP00000015782/1-315 HFKETTATHC GATPYRMFSA ASQPLDPDGT VFRLRFTAMV WWVITFPVFG 101 150 ENSP00000278243/1-315 FFFCIIWSLV FHFEYTVATD CGVPNYLPSV SSAIGGEVPQ RYVWRFCIGL ENSBTAP00000011097/1-254 ---------- ---------- --VPNYLPSV SSAIGGEVPQ RYVWRFCIGL bmy_03650T0/1-305 FFFCIIWSLV FHFEYTVATD CGVPNYLPSV SSAIGGEVPQ RYVWRFCIGL BACU004954/1-305 FFFCIIWSLV FHFEYTVATD CGVPNYLPSV SSAIGGEVPQ RYVWRFCIGL ENSTTRP00000015782/1-315 FFFCIIWSLV FHFEYTVATD CGVPNYLPSV SSAIGGEVPQ RYVWRFCIGL 151 200 ENSP00000278243/1-315 HSAPRFLVAF AYWNHYLSCT SPCSCYRPLC RLNFGLNVVE NLALLVLTYV ENSBTAP00000011097/1-254 HSAPRFLVAF AYWNHYLSCT SPCAGYRPLC RLNFGLNVVE NVALLVLTYV bmy_03650T0/1-305 HSAPRFLVAF AYWNHYLSCA SPCPGYRQLC RLNFGLNIVE NLALLVLTYV BACU004954/1-305 HSAPRFLVAF AYWNHYLSCA SPCPGYRQLC RLNFGLNIVE NLALLVLTYV ENSTTRP00000015782/1-315 HSAPRFLVAF AYWNHYLSCA SPCPSYRQLC RLNFGLNIVE NLALLVLTYV 201 250 ENSP00000278243/1-315 SSSEDFTIHE NAFIVFIASS LGHMLLTCIL WRLTKKHTVS QEDRKSYSWK ENSBTAP00000011097/1-254 SSSEDFTIHE NAFIVFIASS LSHMLLTCIL WRLTKKHTVS QEDRKSYNWK bmy_03650T0/1-305 SSSEDFTIHE NAFIVFIASS LSHMLLTCIL WRLTKKHT-- --DRKSYNWK BACU004954/1-305 SSSEDFTIHE NAFIVFIASS LSHMLLTCIL WRLTKKHT-- --DRKSYNWK ENSTTRP00000015782/1-315 SSSEDFTIHE NAFIVFIASS LSHMLLTCIL WRLTKKHTVS QEERKSYNWK 251 300 ENSP00000278243/1-315 QRLFIINFIS FFSALAVYFR HNMYCEAGVY TIFAILEYTV VLTNMAFHMT ENSBTAP00000011097/1-254 QRLFIINFVS FFTALAVYFR HNMYCEAGVY TIFAILEYTV VLTNMAFHMT bmy_03650T0/1-305 QRLFIINFVS FFTALAAYFR HNMYCEAGVY TIFAILEYTV VLTNMAFHMT BACU004954/1-305 QRLFIINFVS FFTALAAYFR HNMYCEAGVY TIFAILEYTV VLTNMAFHMT ENSTTRP00000015782/1-315 QRLFIINFVS FFTALAAYFR HNMYCEAGVY TIFAILEYTV VLTNMAFHMT 301 350 ENSP00000278243/1-315 AWWDFGNKEL LITSQPEEKR F ENSBTAP00000011097/1-254 AWWDFGNKEL LITSQPEEKR F bmy_03650T0/1-305 AWWDFGNKEL LITAQPEEKR F BACU004954/1-305 AWWDFGNKEL LITTQPEEKR F ENSTTRP00000015782/1-315 AWWDFGNKEL LITSQPEEKR F