KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:03 2014 Check: 00 .. Name: ENSBTAP00000011106/1-229 Len: 238 Check: 3805 Weight: 1.00 Name: ENSP00000330341/1-225 Len: 238 Check: 447 Weight: 1.00 Name: ENSTTRP00000000676/1-229 Len: 238 Check: 3679 Weight: 1.00 Name: bmy_13150T0/1-227 Len: 238 Check: 2955 Weight: 1.00 Name: BACU011568/1-227 Len: 238 Check: 3753 Weight: 1.00 // 1 50 ENSBTAP00000011106/1-229 MVTHSKFPAA GMSRPLDTSL RLKTFSSKSE YQLVVNAVRK LQESGFYWST ENSP00000330341/1-225 MVTHSKFPAA GMSRPLDTSL RLKTFSSKSE YQLVVNAVRK LQESGFYWSA ENSTTRP00000000676/1-229 MVTHSKFPAA GMSRPLDTSL RLKTFSSKSE YQLVVNAVRK LQESGFYWSA bmy_13150T0/1-227 ---------- -MSRPLDTSL RLKTFSSKSE YQLVVNAVRK LQESGFYWSA BACU011568/1-227 ---------- -MSRPLDTSL RLKTFSSKSE YQLVVNAVRK LQESGFYWSA 51 100 ENSBTAP00000011106/1-229 VTGGEANLLL SAEPAGTFLI RDSSDQRHFF TLSVKTQSGT KNLRIQCEGG ENSP00000330341/1-225 VTGGEANLLL SAEPAGTFLI RDSSDQRHFF TLSVKTQSGT KNLRIQCEGG ENSTTRP00000000676/1-229 VTGGEANLLL SAEPAGTFLI RDSSDQRHFF TLSVKTQSGT KNLRIQCEGG bmy_13150T0/1-227 VTGGEANLLL SAEPAGTFLI RDSSDQRHFF TLSVKTQSGT KNLRIQCEGG BACU011568/1-227 VTGGEANLLL SAEPAGTFLI RDSSDQRHFF TLSVKTQSGT KNLRIQCEGG 101 150 ENSBTAP00000011106/1-229 SFSLQSDPRS TQPVPRFDCV LKLVHHYMPA AGAPSFSQPP AEP------- ENSP00000330341/1-225 SFSLQSDPRS TQPVPRFDCV LKLVHHYMPP PGAPSFPSPP TEP------- ENSTTRP00000000676/1-229 SFSLQSDPRS TQPVPRFDCV LKLVHHYMPP SGAPSFSSPP AEP------- bmy_13150T0/1-227 SFSLQSDPRS TQPVPRFDCV LKLVHHYMPP SGAPSFSSPP AEPSSSPPTE BACU011568/1-227 SFSLQSDPRS TQPVPRFDCV LKLVHHYMPP SGAPSFSSPP AEPSSSPPTE 151 200 ENSBTAP00000011106/1-229 --SSSPSSEV PEQPPAQPLS GNPPRRAYYI YSGGEKIPLV LSRPLSSNVA ENSP00000330341/1-225 ------SSEV PEQPSAQPLP GSPPRRAYYI YSGGEKIPLV LSRPLSSNVA ENSTTRP00000000676/1-229 --SSSPSSEV PEQPSAQPLP GSPPRRAYYI YSGGEKIPLV LSRPLSSNVA bmy_13150T0/1-227 PSSSSPSSEV PEQPSAQPLP GSPPRRAYYI YSGGEKIPLV LSRPLSSNVA BACU011568/1-227 PSSSSPSSEV PEQPSTQPLP GSPPRRAYYI YSGGEKIPLV LSRPLSSNVA 201 250 ENSBTAP00000011106/1-229 TLQHLCRKTV NGHLDSYEKV TQLPGPIREF LDQYDAPL ENSP00000330341/1-225 TLQHLCRKTV NGHLDSYEKV TQLPGPIREF LDQYDAPL ENSTTRP00000000676/1-229 TLQHLCRKTV NGHLDSYEKV TQLPGPIREF LDQYDAPL bmy_13150T0/1-227 TLQHLCRKTV NGHLDSYEKV TQLPGPIREF LDQYDAPL BACU011568/1-227 TLQHLCRKTV NGHLDSYEKV TQLPGPIREF LDQYDAPL