KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:04 2014 Check: 00 .. Name: ENSP00000336721/1-1019 Len: 1058 Check: 2744 Weight: 1.00 Name: ENSBTAP00000011109/1-951 Len: 1058 Check: 9799 Weight: 1.00 Name: bmy_06208T0/1-944 Len: 1058 Check: 558 Weight: 1.00 Name: BACU000768/1-896 Len: 1058 Check: 346 Weight: 1.00 Name: ENSTTRP00000015101/1-954 Len: 1058 Check: 1367 Weight: 1.00 // 1 50 ENSP00000336721/1-1019 MLWRVLLSKR PPFPHPELDF QEAPIPSCPG RLPGRKNSVA LAAAPRKEPT ENSBTAP00000011109/1-951 ---------- ---------- ---------- ---------- ---------- bmy_06208T0/1-944 MVLGGVRTLT QP-------- ---------- ---------- ---------- BACU000768/1-896 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015101/1-954 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000336721/1-1019 GDREKPLPFP VLAPFSNPEH SAPAKVVRAA VPKQRKGSKV GDFGDAINWP ENSBTAP00000011109/1-951 ---------- --------EH SAPAKVVRAA VPKQRKGGKV GDFGDAINWP bmy_06208T0/1-944 ---------- ------GSEH AAPAKVVRAA VPKQRKGSKV GDFGDAINWP BACU000768/1-896 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015101/1-954 ---------- ---------H AAPARVVRAA VPKQRKGSKV GDFGDAINWP 101 150 ENSP00000336721/1-1019 TPGEIAHKSV QPQSHKPQPT RKLPPKKDMK EQEKGEGSDS KESPKTKSDE ENSBTAP00000011109/1-951 TPGEIAHKSV QPQAHKSQPA RKLPPKKDMK EQEKGEGSDS KESPKTKSDE bmy_06208T0/1-944 TPGEIAHKSV QPQSHKSQPA RKLPPKKDMK EQEKGEGSDS KESPKTKSDE BACU000768/1-896 ---------- ---------- --------MK EQEKGEGSDS KESPKTKSDE ENSTTRP00000015101/1-954 TPGEIAHKSV QPQSHKSQPA RKLPPKKDMK EQEKGEGSDS KESPKTKSDE 151 200 ENSP00000336721/1-1019 SGEEKNGDED CQRGGQKKK- GNKHKWVPLQ IDMKPEVPRE KLASRPTRPP ENSBTAP00000011109/1-951 SGEEKNGDED CQRGGQKKK- GNKHKWVPLQ IDMKPEVPRE KLVSRPTRPP bmy_06208T0/1-944 SGEEKNGDED YQRGGQKKK- GNKHKWVPLQ IDMKPEVPRE KLVSRPTRPP BACU000768/1-896 SGEEKNGDED YQRGGQKKKA GNKHKWVPLQ IDMKPEVPRE KLVSRPTRPP ENSTTRP00000015101/1-954 SGEEKNGDED YQRGGQKKK- GNKHKWVPLQ IDMKPEVPRE KLVSRPTRPP 201 250 ENSP00000336721/1-1019 EPRHIPANRG EIKGSESATY --VPVAPPTP AWQPEIKPEP AWHDQDETSS ENSBTAP00000011109/1-951 EPRHTPTNRG EIKGSEPVTY --VPVAPPTP AWQPETKSEP AWHDQDETSS bmy_06208T0/1-944 EPRHTPANRG EIKGSEPATY VPVPVAPPTP AWQAETKSEP AWHDQDETSS BACU000768/1-896 EPRHTPANRG EIKGSEPATY VPVPVAPPTP AWQAETKSEP AWHDQDETSS ENSTTRP00000015101/1-954 EPRHTPANRG EIKGSEPATY VPVPVAPPTP AWQPETKSEP AWHDQDETSS 251 300 ENSP00000336721/1-1019 VKSDGAGGAR ASFRGRGRGR GRGRGRGRGG TRTHFDYQFG YRKFDGVEGP ENSBTAP00000011109/1-951 VKSDGAGGAR ASFRGRGRGR GRGRGRGRGG TRTHFDYQFG YRKFDGAEGP bmy_06208T0/1-944 VKSDGAGGAR ASFRGRGRGR GRGRGRGRGG TRTHFDYQFG YRKFDGAEGP BACU000768/1-896 VKSDGAGGAR ASFRGRGRGR GRGRGRGRGG TRTHFDYQFG YRKFDGAEGP ENSTTRP00000015101/1-954 VKSDGAGGAR ASFRGRGRGR GRGRGRGRGG TRTHFDYQFG YRKFDGAEGP 301 350 ENSP00000336721/1-1019 RTPKYMNNIT YYFDNVSSTE LYSVDQELLK DYIKRQIEYY FSVDNLERDF ENSBTAP00000011109/1-951 RTPKYMNNIT YYFDNVSSTE LYSVDQELLK DYIKRQIEYY FSVDNLERDF bmy_06208T0/1-944 RTPKYMNNIT YYFDNVSSTE LYSVDQELLK DYIKRQIEYY FSVDNLERDF BACU000768/1-896 RTPKYMNNIT YYFDNVSSTE LYSVDQELLK DYIKRQIEYY FSVDNLERDF ENSTTRP00000015101/1-954 RTPKYMNNIT YYFDNVSSTE LYSVDQELLK DYIKRQIEYY FSVDNLERDF 351 400 ENSP00000336721/1-1019 FLRRKMDADG FLPITLIASF HRVQALTTDI SLIFAALKDS KVVEIVDEKV ENSBTAP00000011109/1-951 FLRRKMDADG FLPMTLIASF HRVQALTTDI SLIFAALKDS KVVEIVEEKV bmy_06208T0/1-944 FLRRKMDADG FLPITLIASF HRVQALTTDI SLIFAALKDS KVVEIVDEKV BACU000768/1-896 FLRRKMDADG FLPITLIASF HRVQALTTDI SLIFAALKDS KVVEIVDEKV ENSTTRP00000015101/1-954 FLRRKMDADG FLPITLIASF HRVQALTTDI SLIFAALKDS KVVEIVDEKV 401 450 ENSP00000336721/1-1019 RRREEPEKWP L--PPIVDYS QTDFSQLLNC PEFVPRQHYQ KET------- ENSBTAP00000011109/1-951 RRREEPEKWP LPGPPIVDYS QTDFSQLLNC PEFVPRQHYQ KET------- bmy_06208T0/1-944 RRREEPEKWP LPGPPIVDYS QTDFSQLLNC PEFVPRQHYQ KETGRYPAGM BACU000768/1-896 RRREEPEKWP LPGPPIVDYS QTDFSQLLNC PEFVPRQHYQ KET------- ENSTTRP00000015101/1-954 RRREEPEKWP LPGPPIVDYS QTDFSQLLNC PEFVPRQHYQ KET------- 451 500 ENSP00000336721/1-1019 ---------- ---------- -------ESA PGSPRAVTPV PTKTEEVSNL ENSBTAP00000011109/1-951 ---------- ---------- -------ESA PGSPRAVTPV PTKTEEVSNL bmy_06208T0/1-944 WMPPCCPCPL AIRRRAGGMR ISPFHPLESA PGSPRAVTPV PTKTEEVSNL BACU000768/1-896 ---------- ---------- -------ESA PGSPRAVTPV PTKTEEVSNL ENSTTRP00000015101/1-954 ---------- ---------- -------ESA PGSPRAVTPV PTKTEEVSNL 501 550 ENSP00000336721/1-1019 KTLPKGLSAS LPDLDSENWI EVKKRPRPSP ARPKKSEESR FSHLTSLPQQ ENSBTAP00000011109/1-951 KTLPKGLSAS LPDLDSENWI EVKKRPRPSP ARPKKSEEPR FVHSTTLPQH bmy_06208T0/1-944 KTLPKGLSAS LPDLDSENWI EVKKRPRPSP ARPKKSEEPR FLHPTTLPQQ BACU000768/1-896 KTLPKGLSAS LPDLDSENWI EVKKRPRPSP ARPKKSEEPR FLHPTTLPQQ ENSTTRP00000015101/1-954 KTLPKGLSAS LPDLDSENWI EVKKRPRPSP ARPKKSEEPR FLHPTTLPQQ 551 600 ENSP00000336721/1-1019 LPSQQLMSKD QDEQEELDFL FDEEMEQMDG RKNTFTAWSD EESDYEIDDR ENSBTAP00000011109/1-951 LPSQQLMSKD QDEQEELDFL FDEEMEQMDG RKNTFTAWSD EDSDYEIDDR bmy_06208T0/1-944 LPSQQLMSKD QDEQEELDFL FDEEMEQMDG RKNTFTAWSD EDSDYEIDDR BACU000768/1-896 LPSQQLTSKD QDEQEELDFL FDEEMEQMDG RKNTFTAWSD EDSDYEIDDR ENSTTRP00000015101/1-954 LPSQQLMSKD QDEQEELDFL FDEEMEQMDG RKNTFTAWSD EDSDYEIDDR 601 650 ENSP00000336721/1-1019 DVNKILIVTQ TPHYMRRHPG GDRTGNHTSR AKMSAELAKV INDGLFYYEQ ENSBTAP00000011109/1-951 DVNKILIVTQ TPPYMRRHPG GDRTGNHTSR AKMSAELAKV INDGLFYYEQ bmy_06208T0/1-944 DVNKILIVTQ TPPYMRRHPG GDRTGNHTSR AKMSAELAKV INDGLFYYEQ BACU000768/1-896 DVNKILIVTQ TPPYMRRHPG GDRTGNHTSR AKMSAELAKV INDGLFYYEQ ENSTTRP00000015101/1-954 DVNKILIVTQ TPPYMRRHPG GDRTGNHTSR AKMSAELAKV INDGLFYYEQ 651 700 ENSP00000336721/1-1019 DLWAEKFEPE YSQIKQEVEN FKKVNMISRE QFDTLTPEPP VDPNQEVPPG ENSBTAP00000011109/1-951 DLWTEKFEPE YSQIKQEVEN FKKVNMISRE QFDTLTPEPP VDPNQEVPPG bmy_06208T0/1-944 DLWTEKFEPE YSQIKQEVEN FKKVNMISRE QFDTLTPEPP VDPNQEVPPG BACU000768/1-896 DLWTEKFEPE YSQIKQEVEN FKKVNMISRE QFDTLTPEPP VDPNQEVPPG ENSTTRP00000015101/1-954 DLWTEKFEPE YSQIKQEVEN FKKVNMISRE QFDTLTPEPP VDPNQEVPPG 701 750 ENSP00000336721/1-1019 PPRFQQVPTD ALANKLFGAP EPSTIARSLP TTVPESPNYR NTRTPRTPRT ENSBTAP00000011109/1-951 PPRFQQVPTD ALANKLFGAP EPSTIARSLP TTVPESPNYR NARTPRTPRT bmy_06208T0/1-944 PPRFQQVPTD ALANKLFGAP EPSTIARSLP TTVPESPNYR NARTPRTPRT BACU000768/1-896 PPRFQQVPTD ALANKLFGAP EPSTIARSLP TTVPESPNYR NARTPRTPRT ENSTTRP00000015101/1-954 PPRFQQVPTD ALANKLFGAP EPSTIARSLP TTVPESPNYR NARTPRTPRT 751 800 ENSP00000336721/1-1019 PQLKDSSQTS RFYPVVKEGR TLDAKMPRKR KTRHSSNPPL ESHVGWVMDS ENSBTAP00000011109/1-951 PQLKDSSQTS RFYPVVKEGR TLDAKTPRKR KTRHSSNPPL ESHVGWVMDS bmy_06208T0/1-944 PQLKDSSQTS RFYPVVKEGR TLDAKMPRKR KTRHSSNPPL ESHVGWVMDS BACU000768/1-896 PQLKDSSQTS RFYPVVKEGR TLDAKMPRKR KTRHSSNPPL ESHVGWVMDS ENSTTRP00000015101/1-954 PQLKDSSQTS RFYPVVKEGR TLDAKMPRKR KTRHSSNPPL ESHVGWVMDS 801 850 ENSP00000336721/1-1019 REHRPRTASI SSSPSEGTPT VGSYGCTPQS LPKFQHPSHE LLKENGFTQH ENSBTAP00000011109/1-951 REHRPRTASI SSSPSEGTPA VGSYGCTPQS LPKFQHPSHE LLKENGFTQH bmy_06208T0/1-944 REHRPRTASI SSSPSEGTPA VGSYGCTPQS LPKFQHPSHE LLKENGFTQH BACU000768/1-896 REHRPRTASI SSSPSEGTPA VGSYGCTPQS LPKFQHPSHE LLKENGFTQH ENSTTRP00000015101/1-954 REHRPRTASI SSSPSEGTPA VGSYGCTPQS LPKFQHPSHE LLKENGFTQH 851 900 ENSP00000336721/1-1019 VYHKYRRRCL NERKRLGIGQ SQEMNTLFRF WSFFLRDHFN KKMYEEFKQL ENSBTAP00000011109/1-951 VYHKYRRRCL NERKRLGIGQ SQEMNTLFRF WSFFLRDHFN KKMYEEFKQL bmy_06208T0/1-944 VYHKYRRRCL NERKRLGIGQ SQEMNTLFRF WSFFLRDHFN KKMYEEFKQL BACU000768/1-896 VYHKYRRRCL NERKRLGIGQ SQEMNTLFRF WSFFLRDHFN KKMYEEFKQL ENSTTRP00000015101/1-954 VYHKYRRRCL NERKRLGIGQ SQEMNTLFRF WSFFLRDHFN KKMYEEFKQL 901 950 ENSP00000336721/1-1019 ALEDAKEGYR YGLECLFRYY SYGLEKKFRL DIFKDFQEET VKDYEAGQLY ENSBTAP00000011109/1-951 ALEDAKEGYR YGLECLFRYY SYGLEKKFRL DIFKDFQEET VKDYEAGQLY bmy_06208T0/1-944 ALEDAKEGYR YGLECLFRYY SYGLEKKFRL DIFKDFQEET VKDYEAGQLY BACU000768/1-896 ALEDAKEGYR YGLECLFRYY SYGLEKKFRL DIFKDFQEET VKDYEAGQLY ENSTTRP00000015101/1-954 ALEDAKEGYR YGLECLFRYY SYGLEKKFRL DIFKDFQEET VKDYEAGQLY 951 1000 ENSP00000336721/1-1019 GLEKFWAFLK YSKAKNLDID PKLQEYLGKF RRLEDFRVDP PMGEEGNHKR ENSBTAP00000011109/1-951 GLEKFWAFLK YSKAKNLDID PKLQEYLGKF RRLEDFRVDP PMGEEGNHKR bmy_06208T0/1-944 GLEKFWAFLK YSKAKNLDID PKLQEYLGKF RRLEDFRVD- ---------- BACU000768/1-896 GLEKFWAFLK YSKAKNLDID PKLQEYLGKF RRLEDFRVDP PMGEEGNHKR ENSTTRP00000015101/1-954 GLEKFWAFLK YSKAKNLDID PKLQEYLGKF RRLEDFRVDP PMGEEGNHKR 1001 1050 ENSP00000336721/1-1019 HSVVAGGGGG EGRKRCPSQS SSRPAAMISQ PPTPPTGQPV REDAKWTSQH ENSBTAP00000011109/1-951 HPAAAGGGSG EGRKRCPSQS SSRPTT--SQ PPTPPTGQPI REDAKWTSQH bmy_06208T0/1-944 ---VSG---- -----CLS-- --------SF PP-------- ---------- BACU000768/1-896 HPVAAGGGSG EGRRRCPSQS SGRPSAVVSQ PPTPATGQPI REDAKWTSQH ENSTTRP00000015101/1-954 HPVAAGGGSG EGRRRCPSQS SGRPSAVVGQ PPTPATGQPI REDAKWTSQH 1051 1100 ENSP00000336721/1-1019 SNTQTLGK ENSBTAP00000011109/1-951 SDSQTLGK bmy_06208T0/1-944 -------- BACU000768/1-896 SDTQTLGK ENSTTRP00000015101/1-954 SDAQTLGK