KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:43:05 2014 Check: 00 .. Name: ENSBTAP00000011112/1-729 Len: 780 Check: 3873 Weight: 1.00 Name: bmy_15883T0/1-410 Len: 780 Check: 8653 Weight: 1.00 Name: ENSTTRP00000003692/1-592 Len: 780 Check: 9952 Weight: 1.00 Name: BACU011988/1-187 Len: 780 Check: 1653 Weight: 1.00 // 1 50 ENSBTAP00000011112/1-729 ---------- ---------- ---------- MDPALDTWDF SSPLISLWIN bmy_15883T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003692/1-592 FWWSPSIHAG QVFVCSPGVL SGRRARALRR MDPSLDMWDF SS-LISLWIN BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000011112/1-729 RFYIYLGFAF GFSLWICFQI VIRKQNKNSP EKTTPKASQN LMTNGYISRP bmy_15883T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003692/1-592 RFYIYLGFAF GFSLWICFQI VIRKQNKNSQ EKTVPKASRD LMTNGYISLQ BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000011112/1-729 KKEVFVSGVK IFYGSQTGTA KGFATILAEA LSSLNLPVAM INLKDYDPDD bmy_15883T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003692/1-592 KKEVFVSGVK IFYGSQTGTA KG--ATLAEA VSSLGLPVAL INLKEYDPDD BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000011112/1-729 RLIEEVTSKN VCAFLVATYT DGQPPESAAW FCKWLEEAAN DFRFGKTYLK bmy_15883T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003692/1-592 HLVEEVTSKN VSAFLVATYT DGRPTESAEW FCRWLEEAAN DFRFGKTYLK BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000011112/1-729 GMRYAVFGLG NSVYLSHFNT VGKNVDKWLW MLGAHRVMTR GEGDGNVVKS bmy_15883T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003692/1-592 GVRYAVFGLG NSAYVSHFNK VGKDVDKWLW MLGAHRVMSR GEGDCNVVKS BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000011112/1-729 KHGSVEADFT AWKTKFISRL QALRKGERKH CGGNCKKGKC ESNQRGSEVA bmy_15883T0/1-410 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003692/1-592 KHGSIEADFT AWKARFISRL QALCKGERKP CGGNCKKGKC ESNQHGSEAM BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000011112/1-729 EPGSHVQEEL PHRDAEDEEP FGSTNEEESD TEDHQSSNPV IDVEDLGKIM bmy_15883T0/1-410 ---------- ---MFQQEEP FGSTSEEESG TEDHQSLKSV IDVEDLGKIM ENSTTRP00000003692/1-592 EPGSHAQEGF HQRDAEQEEP FGSTSEEESG TEDHQSLKSV IDVEDLGKIM BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000011112/1-729 DHVKKEKREK EQLEGETSAI RSTVKSEASE RRAMITPALR EALTKQGYQL bmy_15883T0/1-410 DHMKKEK--- ---------- ---------- ---------- ---------- ENSTTRP00000003692/1-592 DRMKKEKREK ERQEGETSLI RSTVKNEASE RRAMITPALR EALTKQGYQL BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000011112/1-729 IGSHSGVKLC RWTKSMLRGR GGCYKHTFYG IESHRCMETT PSLACANKCV bmy_15883T0/1-410 ---------- ----SMLRGR GGCYKHTFYG IESHRCMETT PSLACANKCV ENSTTRP00000003692/1-592 IGSHSGVKLC RWTKSMLRGR GGCYKHTFYG IESHRCMETT PSLACANKCV BACU011988/1-187 ---------- ----SMLRGR GGCYKHTFYG IESHRCMETT PSLACANKCV 451 500 ENSBTAP00000011112/1-729 FCWRHHTNPV GTEWRWKMDQ PEMILKEAIE NHQNMIKQFK GVPGVKEERF bmy_15883T0/1-410 FCWRHHTNPV GTEWRWKMDQ AEMILKEAIE NHQNMMKQFR GVPGVREERF ENSTTRP00000003692/1-592 FCWRHHTNPV GTEWRWKMDQ PEMILKEAIE NHQNMMKQFR GVPGVREERF BACU011988/1-187 FCWRHHTNPV GTEWRWKMDQ AEMILKEAIE NHQNMMKQFR GVPGVREERF 501 550 ENSBTAP00000011112/1-729 EEGMTVKHCA LSLVGEPIMY PEINKFLKLL HECKISSFLV TNAQFPAEIR bmy_15883T0/1-410 EEGMTVKHCA LSLVGEPIMY PEINRFLKLL HECKISSFLV TNAQFPAEIR ENSTTRP00000003692/1-592 EEGMTVKHCA LSLVGEPIMY PEINRFLKLL HERKISSFLV TNAQFPAEIR BACU011988/1-187 EEGMTVKHCA LSLVGEPIMY PEINRFLKLL HECKISSFLV TNAQFPAEIR 551 600 ENSBTAP00000011112/1-729 DLKPVTQLYV SVDASTKDSL KKIDRPLFRD FWQRFLDSLK ALAAKQQRTV bmy_15883T0/1-410 NLKPVTQLYV SVDASTKESL KKIDRPLFKD FWQRFLDSLK ALAAKYGTSF ENSTTRP00000003692/1-592 NLKPVTQLYV SVDASTKESL KKIDRPLFKD FWQRFLDSLK ALAAK----- BACU011988/1-187 NLKPVTQLYV SVDASTKESL KKIDRPLFKD FWQRFLDSLK ALAAK----- 601 650 ENSBTAP00000011112/1-729 Y--------- ---------- RLTLVKAWNV DELQAYAELV SLGNPDFIEV bmy_15883T0/1-410 FLFQALLAVI PDSLSYESDM RLTLVKAWNV DELQAYAKLV SLGNPDFIEV ENSTTRP00000003692/1-592 ---------- ---------- ---------- ---------- ---------- BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 651 700 ENSBTAP00000011112/1-729 KGVTYAWDSS GASVNRNQIP WRRELVPRVR N--ENTPSYE VATSHTLSVC bmy_15883T0/1-410 KGVTYCGESS ASSLTMANVP WHEEVVRFVC ELVDLIADYE IACEHEHSNC ENSTTRP00000003692/1-592 ---------- ---------- ---------- ---------- ---------- BACU011988/1-187 ---------- ---------- -----VRIMT S--------- ---------- 701 750 ENSBTAP00000011112/1-729 CRFSLKKFKI GREWWTWIDY SRFQELIQEY EDSGGSKTFS AKDYMAKTPH bmy_15883T0/1-410 LLIAHKKFKI GREWWTWIDY SRFQELIQEY EDSGGSKTFS AKDYMARTPH ENSTTRP00000003692/1-592 ---------- ---------- ---------- ---------- ---------- BACU011988/1-187 ---------- ---------- ---------- ---------- ---------- 751 800 ENSBTAP00000011112/1-729 WALFGANERG FDPKDTRYQR KNKSKDISGC bmy_15883T0/1-410 WALFGADERG FDPKDTRYQR KNKSKDISGC ENSTTRP00000003692/1-592 ---------- ---------- ---------- BACU011988/1-187 ---------- ---------- ----------