KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:06 2014 Check: 00 .. Name: ENSP00000297151/1-586 Len: 604 Check: 8569 Weight: 1.00 Name: ENSBTAP00000011131/1-586 Len: 604 Check: 9073 Weight: 1.00 Name: ENSTTRP00000010975/1-528 Len: 604 Check: 8874 Weight: 1.00 Name: bmy_06449T0/1-536 Len: 604 Check: 3533 Weight: 1.00 Name: BACU003715/1-603 Len: 604 Check: 7709 Weight: 1.00 // 1 50 ENSP00000297151/1-586 ---------- --------MS ATVVDAVNAA PLSGSKEMSL EEPKKMTRED ENSBTAP00000011131/1-586 ---------- --------MS AAAVDAANAA PLSGSKEMSL EEPKKMTRED ENSTTRP00000010975/1-528 ---------- ---------- ---------- ---------- ---------- bmy_06449T0/1-536 MCGSSG---- --REGQITMS AAAMDAGNAA TLSGSKEMSL EEPKKMTRED BACU003715/1-603 MSGCLGVTSG GTGEGQITMS AAAMDTGNAA TLSGSKEMSL EEPKKMTRED 51 100 ENSP00000297151/1-586 WRKKKELEEQ RKLGNAPAEV DEEGKDINPH IPQYISSVPW YIDPSKRPTL ENSBTAP00000011131/1-586 WRKKKELEEQ RKLGNAPAEV DEEGKDINPH IPQYISSVPW YIDPSKRPTL ENSTTRP00000010975/1-528 ---------- ---------- -----DINPH IPQYISSVPW YIDPSKRPTL bmy_06449T0/1-536 WRKKKELEEQ RKLGNAPAEV DEEGKDINPH IPQYISSVPW YIDPSKRPTL BACU003715/1-603 WRKKKELEEQ RKLGNAPAEV DEEGKDINPH IPQYISSVPW YIDPSKRPTL 101 150 ENSP00000297151/1-586 KHQRPQPEKQ KQFSSSGEWY KRGVKENSII TKYRKGACEN CGAMTHKKKD ENSBTAP00000011131/1-586 KHQRPQPEKQ KQYSSSGEWY KRGVKENSIT TKYRKGACEN CGAMTHKKKD ENSTTRP00000010975/1-528 KHQRPQPEKQ KQYSSSGDWY KRGVKENSIT TKYRKGACEN CGAMTHKKKD bmy_06449T0/1-536 KHQRPQPEKQ KQFSSSGDWY KRGVKENSIT TKYRKGACEN CGAMTHKKKD BACU003715/1-603 KHQRPQPEKQ KQFSSSGDWY KRGVKENSIT TKYRKGACEN CGAMTHKKKD 151 200 ENSP00000297151/1-586 CFERPRRVGA KFTGTNIAPD EHVQPQLMFD YDGKRDRWNG YNPEEHMKIV ENSBTAP00000011131/1-586 CFERPRRVGA KFTGTNIAPD EHVQPQLMFD YDGKRDRWNG YNPEEHMKIV ENSTTRP00000010975/1-528 CFERPRRVGA KFTGTNIAPD EHVQPQLMFD YDGKRDRWNG YNPEEHMKIV bmy_06449T0/1-536 CFERPRRVGA KFTGTNIAPD EHLQPQLMFD YDGKRDRWNG YNPEEHMKIV BACU003715/1-603 CFERPRRVGA KFTGTNIAPD EHLQPQLMFD YDGKRDRWNG YNPEEHMKIV 201 250 ENSP00000297151/1-586 EEYAKVDLAK RTLKAQKLQE ELASGKLVEQ ANSPKHQWGE EEPNSQMEKD ENSBTAP00000011131/1-586 EEYAKVDLAK RTLKAQKLQE ELASGKLVEQ ANSPKHQWGE EEPNSQTEKD ENSTTRP00000010975/1-528 EEYAKVDLAK RTLKAQKLQE ELASGKLVEQ ANSPKHPWGE EEPNSQTEKD bmy_06449T0/1-536 EEYAKVDL-- ---------- ---------- -NSPKHQWGE EEPNSQTEKD BACU003715/1-603 EEYAKVDLAK RTLKAQKLQE ELASGKLVEQ ANSPKHQWGE EEPNSQTEKD 251 300 ENSP00000297151/1-586 HNSEDEDEDK YADDIDMPGQ NFDSKRRITV RNLRIREDIA KYLRNLDPNS ENSBTAP00000011131/1-586 HNSEDEDEDK YADDIDMPGQ NFDSKRRITV RNLRIREDIA KYLRNLDPNS ENSTTRP00000010975/1-528 HNSEDEDEDK YADDIDMPGQ NFDSKRRITV RNLRIREDIA KYLRNLDPNS bmy_06449T0/1-536 HNSEDEDEDK YADDIDMPGQ NFDSKRRITV RNLRIREDIA KYLRNLDPNS BACU003715/1-603 HNSEDEDEDK YADDIDMPGQ NFDSKRRITV RNLRIREDIA KYLRNLDPNS 301 350 ENSP00000297151/1-586 AYYDPKTRAM RENPYANAGK NPDEVSYAGD NFVRYTGDTI SMAQTQLFAW ENSBTAP00000011131/1-586 AYYDPKTRAM RENPYANAGK NPDEVSYAGD NFVRYTGDTI SMAQTQLFAW ENSTTRP00000010975/1-528 AYYDPKTRAM RENPYANAGK NPDEVSYAGD NFVRYTGDTI SMAQTQLFAW bmy_06449T0/1-536 AYYDPKTRAM RENPYANAGK NPDEVSYAGD NFVRYTGDTI SMAQTQLFAW BACU003715/1-603 AYYDPKTRAM RENPYANAGK NPDEVSYAGD NFVRYTGDTI SMAQTQLFAW 351 400 ENSP00000297151/1-586 EAYDKGSEVH LQADPTKLEL LYKSFKVKKE DFKEQQKESI LEKYGGQEHL ENSBTAP00000011131/1-586 EAYDKGSEVH LQADPTKLEL LYKSFKVKKE DFKEQQKESI LEKYGGQEHL ENSTTRP00000010975/1-528 EAYDKGSEVH LQADPTKLEL LYKSFKVKKE DFKEQQKEXX XXXYGGQEHL bmy_06449T0/1-536 EAYDKGSEVH LQADPTKLEL LYKSFKVKKE DFKEQQKESI LEKYGGQEHL BACU003715/1-603 EAYDKGSEVH LQADPTKLEL LYKSFKVKKE DFKEQQKESI LEKYGGQEHL 401 450 ENSP00000297151/1-586 DAPPAELLLA QTEDYVEYSR HGTVIKGQER AVACSKYEED VKIHNHTHIW ENSBTAP00000011131/1-586 DAPPAELLLA QTEDYVEYSR HGTVIKGQER AVACSKYEED VKINNHTHIW ENSTTRP00000010975/1-528 DAPPAELLLA QTEDYVEYSR HGTVIKGQER AVASSKYEED VKIHNHTHIW bmy_06449T0/1-536 DAPPAELLLA QTEDYVEYSR HGTVIKGQER AVASSKYEED VKIHNHTHIW BACU003715/1-603 DAPPAELLLA QTEDYVEYSR HGTVIKGQER AVASSKYEED VKIHNHTHIW 451 500 ENSP00000297151/1-586 GSYWKEGRWG YKCCHSFFKY SYCTGEAGKE IVNSEECIIN EITGEESVKK ENSBTAP00000011131/1-586 GSYWKEGRWG YKCCHSFFKY SYCTGEAGKE IANSEECIIN DATGEESVKK ENSTTRP00000010975/1-528 GSYWKEGRWG YKCCHSFFKY SYCTGEAGKE TANSEECIIN DTTGEESVKK bmy_06449T0/1-536 GSYWKEGRWG YKCCHSFFKF SYCTGEAGKE TANSEECIIN DTTGEESVKK BACU003715/1-603 GSYWKEGRWG YKCCHSFFKF SYCTGEAGKE TANSEECIIN DTIGEESVKK 501 550 ENSP00000297151/1-586 PQTLMELHQE KLKEEKKKKK KKKKKHRKSS SDSDDEEKKH EKLKKALNAE ENSBTAP00000011131/1-586 PQTLMEIHQE KLKEEKKKKK KKKRKHRKSS SESDDEEKKH EKLKKALNAE ENSTTRP00000010975/1-528 PQTLMEMHQE KLKEE-KKKK KKKRKHRKSS SESDDEEKKH EKLKKALNAE bmy_06449T0/1-536 PQTLME---- ---------- ---------- ---------- -----ALNAE BACU003715/1-603 PQTLMEMHQE KLKEE-KKKK KKKRKHRKSS SESDDEEKKH EKLKKALNAE 551 600 ENSP00000297151/1-586 EARLLHVKET MQIDERKRPY NSMYETREPT EEEMEAYRMK RQRPDDPMAS ENSBTAP00000011131/1-586 EARLLHVKEI MQIDERKRPY NSIYETREPT EEEMEAYRMK RQRPDDPMAS ENSTTRP00000010975/1-528 EARLLHVKEI MQIDERKRPY SSIYETREPT EEEMEAYRMK RQRPDDPMAS bmy_06449T0/1-536 EARLLHVKEI MQIDERKRPY SSIYETREPT EEEMEAYRMK RQRPDDPMAS BACU003715/1-603 EARLLHVKEL MQIDERKRPY SSIYETREPT EEEMEAYRMK RQRPDDPMAS 601 650 ENSP00000297151/1-586 FLGQ ENSBTAP00000011131/1-586 FLGQ ENSTTRP00000010975/1-528 FLGQ bmy_06449T0/1-536 FLGQ BACU003715/1-603 FLGQ