KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:08 2014 Check: 00 .. Name: ENSTTRP00000015036/1-765 Len: 771 Check: 8447 Weight: 1.00 Name: ENSP00000440288/1-766 Len: 771 Check: 9083 Weight: 1.00 Name: ENSBTAP00000011137/1-727 Len: 771 Check: 5417 Weight: 1.00 Name: bmy_01464T0/1-765 Len: 771 Check: 5873 Weight: 1.00 Name: BACU013647/1-766 Len: 771 Check: 9405 Weight: 1.00 // 1 50 ENSTTRP00000015036/1-765 -MQLWKAVVV TLAFMSLDVG MTTAIYVISH LDRSLLEDIR HFNIFDSVLD ENSP00000440288/1-766 -MRLWKAVVV TLAFMSVDIC VTTAIYVFSH LDRSLLEDIR HFNIFDSVLD ENSBTAP00000011137/1-727 -MRLCKAVVV TLAFMSLDIG MTTAIYILSH LDRSLLEDIR HFNIFDSVLD bmy_01464T0/1-765 MNRAEPAPLR TPARCTPSPR LT--WCQVSH LDRSLLEDIR HFNIFDSVLD BACU013647/1-766 -MQLWKAVVV TLAFMSLDVG MTTAIYVLSH LDRSLLEDIR HFNIFDSVLD 51 100 ENSTTRP00000015036/1-765 LWAACLYRSC LLLGATIGVA KNSTLGPRRL RASWTVIALV CLFAGIYTMV ENSP00000440288/1-766 LWAACLYRSC LLLGATIGVA KNSALGPRRL RASWLVITLV CLFVGIYAMV ENSBTAP00000011137/1-727 LWAACVYRSC LLLGATIGVA KNSTLGPRRL RASWTVIALV CLFGGIYTMV bmy_01464T0/1-765 LWAACLYRSC LLLGATIGVA KNSTLGPRRL RASWTVIALV CLFAGIYTMV BACU013647/1-766 LWAACLYRSC LLLGATIGVA KNSTLGPRRL RASWTVIALV CLFAGIYTMV 101 150 ENSTTRP00000015036/1-765 KLLLFSEVRK PVRDPWFWAL FVWTYISLAA SFLLWWLLST VQPDAKALER ENSP00000440288/1-766 KLLLFSEVRR PIRDPWFWAL FVWTYISLGA SFLLWWLLST VRPGTQALEP ENSBTAP00000011137/1-727 KLLLFSEVRK PVRDPWFWAL FVWTYISLTA SFLLWWLLST VRPDTKALGR bmy_01464T0/1-765 KLLLFSEVRK PVRDPWFWAL FVWTYISLAA SFLLWWLLST VQPDAKALER BACU013647/1-766 KLLLFSEVRK PVRDPWFWAL FVWTYISLAA SFLLWWLLST VQPDAKAVER 151 200 ENSTTRP00000015036/1-765 GAGA----EA EGPPGEDRPA PEQASGATLQ KLLSYTKPDI AFLVAASFFL ENSP00000440288/1-766 GAAT----EA EGFPGSGRPP PEQASGATLQ KLLSYTKPDV AFLVAASFFL ENSBTAP00000011137/1-727 GAGAEGEGEG EGFPGEDRPA PEQASGATLQ KLLSYTKPDI AFLVAASFFL bmy_01464T0/1-765 GAGA----EA EGLPGEDRPA SEQASGATLQ KLLSYTKPDI AFLVAASFFL BACU013647/1-766 GAGA----EA EGLPGEDRPA SEQASGATLQ KLLSYTKPDI AFLVAASFFL 201 250 ENSTTRP00000015036/1-765 IMAALXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXV ENSP00000440288/1-766 IVAALGETFL PYYTGRAIDG IVIQKSMDQF STAVVIVCLL AIGSSFAAGI ENSBTAP00000011137/1-727 IVAALGETFL PYYTGRAIDG IVIQKSMEQF SAAVIVMCVL AIGSSFAAGI bmy_01464T0/1-765 IMAALGETFL PYYTGRAIDG IVLQKSMEQF STAIIVMCVL AIGSSFAAGI BACU013647/1-766 IMAALGETFL PYYTGRAIDG IVIQKSMEQF STAIIVMCVL AIGSSFAAGI 251 300 ENSTTRP00000015036/1-765 RGGIFTLIFA RLNIRLRNRL FRSLVSQETS FFDENRTGDL ISRLTSDTTM ENSP00000440288/1-766 RGGIFTLIFA RLNIRLRNCL FRSLVSQETS FFDENRTGDL ISRLTSDTTM ENSBTAP00000011137/1-727 RGGIFTLIFA RLNIRLRNRL FRSLVSQETS FFDENRTGDL ISRLTSDTTM bmy_01464T0/1-765 RGGIFTLIFA RLNIRLRNRL FRSLVSQETS FFDENRTGDL ISRLTSDTTM BACU013647/1-766 RGGIFTLIFA RLNIRLRNRL FRSLVSQETS FFDENRTGDL ISRLTSDTTM 301 350 ENSTTRP00000015036/1-765 VSDLVSQNIN IFLRNTVKVT GVVVFMFSLS WQLSLVTFMG FPIIMMVSDI ENSP00000440288/1-766 VSDLVSQNIN VFLRNTVKVT GVVVFMFSLS WQLSLVTFMG FPIIMMVSNI ENSBTAP00000011137/1-727 VSDLVSQNIN IFLRNTVKVT GVVVFMFSLS WQLSLVTFMG FPIIMMVSDI bmy_01464T0/1-765 VSDLVSQNIN IFLRNTVKVT GVVVFMFSLS WQLSLVTFMG FPIIMMVSDV BACU013647/1-766 VSDLVSQNIN IFLRNTVKVT GVVVFMFSLS WQLSLVTFMG FPIIMMVSDV 351 400 ENSTTRP00000015036/1-765 YGKYYKRLSK EVQNALARAS STAEETISAM KTVRSFANEE EEAEVYSRKL ENSP00000440288/1-766 YGKYYKRLSK EVQNALARAS NTAEETISAM KTVRSFANEE EEAEVYLRKL ENSBTAP00000011137/1-727 YGKYYKRLSK EVQSALARAS STAEETISAM KTVRSFANEE EEAEVYSRKL bmy_01464T0/1-765 YGKYYKRLSK EVQNALARAS STAEETISAM KTVRSFANEE EEAEVYSRKL BACU013647/1-766 YGKYYKRLSK EVQNALARAS STAEETISAM KTVRSFANEE EEAEVYSRKL 401 450 ENSTTRP00000015036/1-765 QQVYKLNRKE AAAYMYYVWG SGLTLL-VQV SILYYGGHLV ISGQMTSGNL ENSP00000440288/1-766 QQVYKLNRKE AAAYMYYVWG SGLTLLVVQV SILYYGGHLV ISGQMTSGNL ENSBTAP00000011137/1-727 QQVYKLNRKE AAAYMYYVWG SG-------- ---------- ---------- bmy_01464T0/1-765 QQVYKLNRKE AAAYMYYVWG SGLTLLVVQV SILYYGGHLV ISGQMTSGNL BACU013647/1-766 QQVYKLNRKE AAAYMYYVWG SGLTLLVVQV SILYYGGHLV ISGQMTSGNL 451 500 ENSTTRP00000015036/1-765 ISFIIYEFVL GDCMESVGSV YSGLMQGVGA AEKVFEFIDR QPTMVHDGNL ENSP00000440288/1-766 IAFIIYEFVL GDCMESVGSV YSGLMQGVGA AEKVFEFIDR QPTMVHDGSL ENSBTAP00000011137/1-727 ---------- -----SVGSV YSGLMQGVGA AEKVFEFIDR QPTMVHDGSL bmy_01464T0/1-765 ISFIIYEFVL GDCMESVGSV YSGLMQGVGA AEKVFEFIDR QPTMVHDGNL BACU013647/1-766 ISFIIYEFVL GDCMESVGSV YSGLMQGVGA AEKVFEFIDR QPTMVHDGNL 501 550 ENSTTRP00000015036/1-765 APDHLEGRVD FENVTFTYRT RPHTQVLQNV SFSLSPGKVT ALVGPSGSGK ENSP00000440288/1-766 APDHLEGRVD FENVTFTYRT RPHTQVLQNV SFSLSPGKVT ALVGPSGSGK ENSBTAP00000011137/1-727 APDHLEGRVD FENVTFTYRT RPHTQVLQNV SFSLSPGKVT ALVGPSGSGK bmy_01464T0/1-765 APDHLEGRVD FENVTFTYRT RPHTQVLQNV SFSLSPGKVT ALVGPSGSGK BACU013647/1-766 APDHLEGRVD FENVTFTYRT RPHTQVLQNV SFSLSPGKVT ALVGPSGSGK 551 600 ENSTTRP00000015036/1-765 SSCVNILENF YPLEGGRVLL DGKPISAYDH KYLHRVISLV SQEPVLFARS ENSP00000440288/1-766 SSCVNILENF YPLEGGRVLL DGKPISAYDH KYLHRVISLV SQEPVLFARS ENSBTAP00000011137/1-727 SSCVNILENF YPLEGGQVLL DGKPIGAYDH KYLHRVISLV SQEPVLFARS bmy_01464T0/1-765 SSCVNILENF YPLEGGRVLL DGKPISAYDH KYLHRVISLV SQEPVLFARS BACU013647/1-766 SSCVNILENF YPLEGGRVLL DGKPISAYDH KYLHRVISLV SQEPVLFARS 601 650 ENSTTRP00000015036/1-765 ITDNISYGLP AVPFEVVVEA AQKANAHGFI MELQDGYNTX XXXXXXXXXX ENSP00000440288/1-766 ITDNISYGLP TVPFEMVVEA AQKANAHGFI MELQDGYSTE TGEKGAQLSG ENSBTAP00000011137/1-727 ITDNISYGLP TVPFETVVEA AQKANAHGFI MELQDGYNTE TGEKGAQLSG bmy_01464T0/1-765 ITDNISYGLP TVPFEVVVEA AQKANAHGFI MELQDGYNTE TGEKGAQLSG BACU013647/1-766 ITDNISYGLP TVPFEVVVEA AQKANAHGFI MELQDGYNTE TGEKGAQLSG 651 700 ENSTTRP00000015036/1-765 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXIQQAI HGNLQKHTVL ENSP00000440288/1-766 GQKQRVAMAR ALVRNPPVLI LDEATSALDA ESEYLIQQAI HGNLQKHTVL ENSBTAP00000011137/1-727 GQKQRVAMAR ALVRNPPVLI LDEATSALDA ESEYLIQQAI HGNLQKHTVL bmy_01464T0/1-765 GQKQRVAMAR ALVRNPPVLI LDEATSALDA ESEYLIQQAI HGNLRQHTVL BACU013647/1-766 GQKQRVAMAR ALVRNPPVLI LDEATSALDA ESEYLIQQAI HGNLQKHTVL 701 750 ENSTTRP00000015036/1-765 IIAHRLSTVE RAHLIVVLDK GRVVQQGTHQ QLLAQGGLYA RLVQRQMLGL ENSP00000440288/1-766 IIAHRLSTVE HAHLIVVLDK GRVVQQGTHQ QLLAQGGLYA KLVQRQMLGL ENSBTAP00000011137/1-727 IIAHRLSTVE RAHLIVVLDK GRVVQQGTHQ QLLAQGGLYA RLVQRQMLGL bmy_01464T0/1-765 IIAHRLSTVE RAHLIVVLDK GRVVQQGTHQ QLLAQGGLYA RLVQRQMLGL BACU013647/1-766 IIAHRLSTVE RAHLIVVLDK GRVVQQGTHQ QLLAQGGLYA RLVQRQMLGL 751 800 ENSTTRP00000015036/1-765 EPASDCTAGH REPPGNGGHK A ENSP00000440288/1-766 QPAADFTAGH NEPVANGSHK A ENSBTAP00000011137/1-727 EPTGDFTAGH REPPGNGSHK A bmy_01464T0/1-765 EPASDCTAGH REPPGNGSHK A BACU013647/1-766 EPASDCTAGH REPPGNGSHK A