KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:43:12 2014 Check: 00 .. Name: ENSTTRP00000012459/1-426 Len: 441 Check: 1773 Weight: 1.00 Name: bmy_12251T0/1-307 Len: 441 Check: 1480 Weight: 1.00 Name: ENSBTAP00000011166/1-419 Len: 441 Check: 1106 Weight: 1.00 Name: ENSP00000290921/1-440 Len: 441 Check: 7388 Weight: 1.00 Name: BACU009122/1-396 Len: 441 Check: 4847 Weight: 1.00 // 1 50 ENSTTRP00000012459/1-426 ---------- ----VRPPIM NGPLHPRPLV ALLDGRDCTV EMPILKDVAT bmy_12251T0/1-307 ---------- -MSGVRPPIM NGPLHPRPLV ALLDGRDCTV EMPILKDVAT ENSBTAP00000011166/1-419 ---------- -MAGVRPPIM NGPMHPRPLV ALLDGRDCTV EMPILKDVAT ENSP00000290921/1-440 MGSSHLLNKG LPLGVRPPIM NGPLHPRPLV ALLDGRDCTV EMPILKDVAT BACU009122/1-396 ---------- ---------M NGPLHPRPLV ALLDGRDCTV EMPILKDVAT 51 100 ENSTTRP00000012459/1-426 VAFCDAQSTQ EIHEKVLNEA VGALMYHTIT LTREDLEKFK ALRIIVRIGS bmy_12251T0/1-307 VAFCDAQSTQ EIHEKVLNEA VGALMYHTIT LTREDLEKFK ALRIIVRIGS ENSBTAP00000011166/1-419 VAFCDAQSTQ EIHEKVLNEA VGALMYHTIT LTREDLEKFK ALRIIVRIGS ENSP00000290921/1-440 VAFCDAQSTQ EIHEKVLNEA VGALMYHTIT LTREDLEKFK ALRIIVRIGS BACU009122/1-396 VAFCDAQSTQ EIHEKVLNEA VGALMYHTIT LTREDLEKFK ALRIIVRIGS 101 150 ENSTTRP00000012459/1-426 GFDNIDIKSA GDLXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_12251T0/1-307 GFDNIDIKSA GDLGIAVCNV PAASVEETAD STMCHILNLY RRTTWLHQAL ENSBTAP00000011166/1-419 GFDNIDIKSA GDLGIAVCNV PAASVEETAD STMCHILNLY RRTTWLHQAL ENSP00000290921/1-440 GFDNIDIKSA GDLGIAVCNV PAASVEETAD STLCHILNLY RRATWLHQAL BACU009122/1-396 GFDNIDIKSA GDLGIAVCNV PAASVEETAD STMCHILNLY RRTTWLHQAL 151 200 ENSTTRP00000012459/1-426 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXRVGQAVA LRAKAFGFNV bmy_12251T0/1-307 REGTRVQSVE QIREVASGAA RIRGETLGII GLGRVGQAVA LRAKAFGFNV ENSBTAP00000011166/1-419 REGTRVQSVE QIREVASGAA RIRGETLGVI GLGRVGQAVA LRAKAFGFNV ENSP00000290921/1-440 REGTRVQSVE QIREVASGAA RIRGETLGII GLGRVGQAVA LRAKAFGFNV BACU009122/1-396 REGTRVQS-- ---------- ---------- ---RVGQAVA LRAKAFGFNV 201 250 ENSTTRP00000012459/1-426 LFYDPYLADG TERALGLQRV STLQDLLFHS DCVTLHCGLN EHNHHLINDF bmy_12251T0/1-307 LFYDPYLADG TERALGLQRV STLQDLLFHS DCVTLHCGLN EHNHHLINDF ENSBTAP00000011166/1-419 LFYDPYLADG TERALGLQRV STLQDLLFHS DCVTLHCGLN EHNHHLINDF ENSP00000290921/1-440 LFYDPYLSDG VERALGLQRV STLQDLLFHS DCVTLHCGLN EHNHHLINDF BACU009122/1-396 LFYDPYLADG TERALGLQRV STLQDLLFHS DCVTLHCGLN EHNHHLINDF 251 300 ENSTTRP00000012459/1-426 TVKQXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXFS bmy_12251T0/1-307 TVKQMRQGAF LVNTARGGLV DEKALAQALK EGRIRGAALD VHESEPFR-- ENSBTAP00000011166/1-419 TVKQMRQGAF LVNTARGGLV DEKALAQALK EGRIRGAALD VHESEPFSFS ENSP00000290921/1-440 TVKQMRQGAF LVNTARGGLV DEKALAQALK EGRIRGAALD VHESEPFSFS BACU009122/1-396 TVKQMRQGAF LVNTARGGLV DEKALAQALK EGRIRGAALD VHESEPFSFS 301 350 ENSTTRP00000012459/1-426 QGPLKDAPNL ICTPHAAWYS EQASIEMREE AAREIRRAVT GRIPDSLKNC bmy_12251T0/1-307 ---------- -CLPVVPW-- ---------- GPRDGAR--- ---------- ENSBTAP00000011166/1-419 QGPLKDAPNL ICTPHAAWYS EQASIEMREE AAREIRRAIT GRIPDSLKNC ENSP00000290921/1-440 QGPLKDAPNL ICTPHAAWYS EQASIEMREE AAREIRRAIT GRIPDSLKNC BACU009122/1-396 QGPLKDAPNL ICTPHAAWYS EQASIEMREE AAREIRRAIT GRIPDSLKNC 351 400 ENSTTRP00000012459/1-426 VNKDHLAAAT HWASVDPAVV HPELNGAAY- RYPPGVVGVA PSGIPAAVEG bmy_12251T0/1-307 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000011166/1-419 VNKDHLAAAT HWASVDPAVV HPELNGAAYS RYPPGVVGVA PSGIPAAVEG ENSP00000290921/1-440 VNKDHLTAAT HWASMDPAVV HPELNGAAY- RYPPGVVGVA PTGIPAAVEG BACU009122/1-396 VNKDHLAAAT HWASVDPAVV HPELNGAAY- RYPPGVVGVA PSGIPAAVEG 401 450 ENSTTRP00000012459/1-426 IVPSAMSLSH GLPPVSHPPH APSPGQTVKP EADRDHASDQ L bmy_12251T0/1-307 ---------- -------PAY APR------- ---------- - ENSBTAP00000011166/1-419 IVPSAMSLSH GLPPVSHPPH XPRPPRPPRP ---------- - ENSP00000290921/1-440 IVPSAMSLSH GLPPVAHPPH APSPGQTVKP EADRDHASDQ L BACU009122/1-396 IVPSAMSLSH GLPPVSHPPH APSPGQTVKP EADRDHASDQ L